Displaying 20 results from an estimated 3000 matches similar to: "ATLAS threaded 64 bit (Opteron) - need *.so?"
2006 Jan 13
1
Problems installing R 2.2.1
We are trying to install R2.2.1 on a IBM P655 Cluster, SuSE LE 9.1
We are using gcc v 3.3.3
and we are getting this error on make
g77 -fPIC -g -O2 -ffloat-store -c dlamc.f -o dlamc.lo
g77 -fPIC -g -O2 -c dlapack0.f -o dlapack0.lo
g77 -fPIC -g -O2 -c dlapack1.f -o dlapack1.lo
g77 -fPIC -g -O2 -c dlapack2.f -o dlapack2.lo
g77 -fPIC -g -O2 -c dlapack3.f -o dlapack3.lo
g77 -fPIC -g
2006 May 18
1
Stuck in R installation, help~~
Hi all,
I'm stuck in the installation of R.
When I run configure, I got the error:
configure: error: --with-readline=yes (default) and headers/libs are
not available
I followed one answer in some post and use this:
./configure --with-prefix=/home/user/R-2.2.1 --with-readline=no
It successfully configured but I encountered another problem while make:
gcc -shared -L/usr/local/lib64 -o
2006 Sep 27
1
Building R-2.3.1 for Windows with ATLAS
Ok, moved to R-devel.
I tried to build R-2.3.1. Since I intent to distribute this tuned R to
all other who have a computer like mine here at work I thought it was
best to stay with the latest stable release.
About your suggestion, I could'n find xerblas.o file. And I don't know
how to edit libf77blas.a. I tried to open it with VIM
(http://vim.sf.net/) but there was a lot of strange
2006 May 03
1
Installation problem
I am trying to install R-2.3.0 on a 64bit linux box and encounter
several error during the make step. I'd appreciate any help. Error
messages follow:
[root at calculon R-2.3.0]# make
make[4]: Entering directory
`/state/partition1/apps/packages/R-2.3.0/src/modules/lapack'
gcc -shared -L/usr/local/lib64 -o libRlapack.so dlamc.o dlapack0.o
dlapack1.o dlapack2.o dlapack3.o cmplx.o
2006 Sep 26
1
Building R for Windows with ATLAS
I think this is not a R-devel question. Sorry to all if I'm wrong,
please let me know.
I managed to build R successfully with the default BLAS but when I
change the MKRULES to use ATLAS BLAS and set the path to
"C:/cygwin/home/Administrador/ATLAS/lib/WinNT_ATHLONSSE2" I got the
following error message (I'm posting only the final part, there was a
lot of compilation before this):
2012 May 09
2
R Installation Manual - ATLAS BLAS guidance that is not in the current version
Good afternoon.
I am trying to compile a version of Rblas.dll based on ATLAS for the Corei7. I had remembered that there was mention of which file to adjust and that "xerbla" needed to be removed from one of the outputs from the last time I tried a few years ago. The most recent version of the R Installation manual does not say anything about this. An older version (2.10 I believe) has
2010 May 14
1
Compiling R with ATLAS
Hello. I know almost nothing about Linux, so I apologize if the answer to
this is obvious.
I am trying to compile R with ATLAS (successfully compiled 3.9.24 on Ubuntu
10.04 64 bit). I configured with:
./configure --enable-R-shlib --enable-BLAS-shlib
--with-blas="-L/usr/local/atlas/lib -lf77blas -latlas"
--with-lapack="-L/usr/local/atlaslib -llapack -lcblas" --with-x
and I
2010 May 14
1
Compiling R with ATLAS
Hello. I know almost nothing about Linux, so I apologize if the answer to
this is obvious.
I am trying to compile R with ATLAS (successfully compiled 3.9.24 on Ubuntu
10.04 64 bit). I configured with:
./configure --enable-R-shlib --enable-BLAS-shlib
--with-blas="-L/usr/local/atlas/lib -lf77blas -latlas"
--with-lapack="-L/usr/local/atlaslib -llapack -lcblas" --with-x
and I
2010 May 28
2
Compiling R-2.11.0 with ATLAS-tuned BLAS and LAPACK
Hello. I am a Linux neophyte and know almost nothing ?about compiling,
so I would appreciate any help and advice y'all would care to offer.
I am trying to compile the 64 bit version of R using a tuned ATLAS and
LAPACK (ATLAS 3.9.24). I am running Ubunto 10.04 LTS (through wubi,
FWIW). The ATLAS and LAPACK files (atlas.so, f77blas.so, lapack.so,
and cblas.so) are sitting in the folder
2001 Jul 30
3
ATLAS
I thought I would try compiling R this time with the ATLAS libraries.
I have compiled ATLAS and I have the following libraries:
libatlas.a libf77blas.a libptcblas.a libtstatlas.a
libcblas.a liblapack.a libptf77blas.a
Is it sufficient to use ' --with-blas=libatlas.a ' when configuring or
do I need to specify any of the other libraries as well?
--
William D. McCoy
2005 Aug 29
1
BLAS and ATLAS
On Mon, Aug 29, 2005 at 11:48:23AM +0100, Prof Brian Ripley wrote:
> On Mon, 29 Aug 2005, G?ran Brostr?m wrote:
> >LAPACK/BLAS routines call xerbla "if an input parameter has an
> >invalid value" (exact quote from XERBLA at Netlib). Other types of errors
> >are not printed (by xerbla), but it is up to the user to check the return
> >value of the argument
2003 Apr 25
1
make? on Macos 10.2.4
Greetings on A.N. Kolmogorov's 100th birthday:
I am sure that this is a resolved problem, certainly it has been raised in R help
several times before, but I can't seem to find the right clue. I've recently
upgraded a G4 to OS 10.2.5 and I thought I would have another go at installing
R from source, after failing to accomplish this in 10.1.
So with 1.7.0 from CRAN configure seems to
2005 Oct 25
3
error from make: gcc -shared -L/usr/local/lib64 ... relocation R_X86_64_32...
I hope someone can point me, a newcomer to building R as well as 64-bit R, in
a useful direction. I have a dual Opteron 275 box running RedHat EL4. I ran
configure successfully, and, then, get the following error while running make:
make[4]: Entering directory `/tmp/R-2.2.0/src/modules/lapack'
g77 -fPIC -g -O2 -ffloat-store -c dlamc.f -o dlamc.lo
g77 -fPIC -g -O2 -c dlapack0.f -o
2010 Nov 20
1
R-.12.0 atlas lapack
Greetings,
I last built R-2.11.1 a few months ago. The computer was equipped with
these:-
---cpu amd64 2 cores
---o/s cblfs 64-bit only linux kernel-2.6.32 gcc-4.4.2 jdk(1.5)-6U20?
---bls atlas3.9.26 lapacck-3.2.1
I obtained an installed directory of ~58Mbytes and in the ~/lib directory
was libR.so (~7.8Mbytes in size) as well as libRblas.so and libRlapack.so
(~2.9Mbytes).
I have
2004 May 03
2
R-1.9.0 won't compile on OSX (PR#6848)
Full_Name: Dan Kelley
Version: 1.9.0
OS: OSX (Darwin 7.3.0)
Submission from: (NULL) (129.173.23.36)
R-1.9.0 will not compile on Apple OSX (Darwin kernel 7.3.0). The error msg
starts as follows, and has several more errors.
gcc -dynamiclib -L/sw/lib -L/usr/local/lib -install_name
/Library/Frameworks/R.f
ramework/Versions/1.9.0/Resources/bin/libRlapack.dylib -o libRlapack.dylib
dlapa
ck0.lo
2005 Sep 02
0
Build R with ATLAS
Hi,
I followed this message,
https://stat.ethz.ch/pipermail/r-devel/2004-February/028942.html, to
compile ATLAS with gcc and g77 on AMD Opteron. I then followed the
instructions on this message,
https://stat.ethz.ch/pipermail/r-devel/2004-February/028966.html, to
convert static libraries to dynamic libraries.
However, when I tried to configure R-devel, I got the following error
2010 Nov 13
1
LAPACK lib problem, lme4, lastest R, Linux
I just dumped Vista off a laptop and installed Ubuntu 10.10 (latest
release) as the single operating system. I did all of the updates and
then installed emacs and ess. Next I installed R by following the the
usual instructions on the CRAN site. At this point all is working I am
now in the process of installing the packages that I normally have
installed. I am having a problem with the LAPACK
2011 Jan 28
2
R CMD INSTALL cannot find libf77blas
I feel like Marlon Brando in "On the Waterfront" where he's told "It's
not your night, kid", except for me it has been the last two months
trying to debug memory problems. Now I can't even install an old
version of this package on a netbook running the Ubuntu 10.10 netbook
remix because it can't find the libraries libf77blas and libatlas.
I have even gone to
2005 Aug 16
1
Compile failure on OSX
Hi,
I am trying to compile R-2.1.1 on MacOSX 10.3.9, but the make is failing (I
am building it without all the aqua stuff):
./configure --enable-R-shlib --with-lapac
make
.... Snip .....
gcc -dynamiclib -L/sw/lib -L/usr/local/lib -install_name
/Library/Frameworks/R.framework/Versions/2.1.1/Resources/lib/libRlapack.dyli
b -o libRlapack.dylib dlamc.lo dlapack0.lo dlapack1.lo dlapack2.lo
2006 Jun 23
1
Compiling R 2.3.1 on SuSE 8.2 and 10.0: error with libRlapack.so (PR#9026)
--gKMricLos+KVdGMg
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I compiled R 2.3.1 on two SuSE systems.
With SuSE 8.2 I got an error which I had not on SuSE 10:
/usr/lib/gcc-lib/i486-suse-linux/3.3/../../../../i486-suse-linux/bin/ld: cannot find -lRlapack
On both system libRlapack.so is made, but the size is verz different:
SuSE 8.2: -rwxr-x--- 1 wf sys