similar to: Problem in 'methods' package (PR#4525)

Displaying 20 results from an estimated 800 matches similar to: "Problem in 'methods' package (PR#4525)"

2003 Oct 19
1
Running RMySQL with SuSE 8.2?
Since there doesn't appear to be an RMySQL rpm for SuSE 8.*, does anyone know if the 7.3 version will work with the SuSE 8.2 rpms of R and DBI? The package installs without complaint, but when I try to run con <- dbConnect(dbDriver("MySQL"),dbname="test") I get the error Error in dbConnect(dbDriver("MySQL")) : couldn't find function
2003 Oct 11
1
DBI Interface broken
Hi, I'm trying to use R's DBI interface but it appears to be broken. I am using R 1.8.0 on Linux, and have just installed DBI 0.1-6 through the command 'install.packages("DBI")'. Installation went fine, but now when I try to do a simple dbConnect(), it won't do anything besides complaining about an internal error: > library(DBI) > dbConnect(anything) Error
2003 Dec 10
1
How to start RMySQL
I am a newbie in R and want to use MySQL database. Here is what I have and done. R 1.8.0 mysql 4.0.16 Both running in Windows XP. I download the RMySQL.zip from the internet and used the Packages installer in the RGui to install RMySQL. I also installed DBI packages. I ran the following and got the error. > mgr<-dbDriver("MySQL") Error in dbDriver("MySQL") :
2009 Sep 09
1
ROracle ubuntu64 issue
Hi, i have R on ubuntu64 i got ROracle database connection issues as seen below at a loss do to what next > library(ROracle) Loading required package: DBI > m <- dbDriver("Oracle") > con <- dbConnect(m, username="EPICEDF", password="ps39000b", dbname="EPICD2007", address="10.1.16.40") Error in oraNewConnection(drv, ...) : unused
2003 Oct 21
1
Patches for DBI/RMySQL "valueClass" problem?
According David Jame's response to my earlier question, there is a problem with setGeneric.setMethod in R 1.8.0 that affects DBI and RMySQL. Is there a fix for this? David Jame's refers to an 'R-patched version' but I haven't seen anything like this on CRAN. Would going back to an older version of R solve the problem? Thanks, Barnet Wagman "David James wrote:
2009 Jun 04
2
RPostgreSQL segfault with LEFT JOIN
Hi, I recently upgraded to R 2.9.0 on linux x86. After doing so, I switched to the RPostgreSQL package for interfacing with a postgresql database. I am using postgresql 8.3.7. A query that works from the postgresql terminal is causing a segfault when executed from R. My sessionInfo, the error message, and the R code used to generate the error are listed below. I have noticed that a
2003 Nov 12
0
RMySQL & couldn't find function ".valueClassTest"
Hi Arend, I had the same problem on RH 9 as you, but the tip on http://stat.bell-labs.com/RS-DBI/download/index.html at the bottom telling: """"""""""""""""""""""""""""""""""""""""" The
2019 Jun 22
2
methods package: A _R_CHECK_LENGTH_1_LOGIC2_=true error
DISCLAIMER: I can not get this error with R --vanilla, so it only occurs when some other package is also loaded. I don't have time to find to narrow that down for a reproducible example, but I believe the following error in R 3.6.0: > Sys.setenv("_R_CHECK_LENGTH_1_LOGIC2_" = "true") > library(oligo) Error in omittedSig && (signature[omittedSig] !=
2019 Jun 23
2
methods package: A _R_CHECK_LENGTH_1_LOGIC2_=true error
Thank you. To correct myself, I can indeed reproduce this with R --vanilla too. A reproducible example is: $ R --vanilla R version 3.6.0 Patched (2019-05-31 r76629) -- "Planting of a Tree" ... > Sys.setenv("_R_CHECK_LENGTH_1_LOGIC2_" = "true") > loadNamespace("oligo") Error in omittedSig && (signature[omittedSig] != "missing") :
2018 Dec 08
2
Solr
After some testsing, I managed to get proper functionning - The schema.xml is attached below (quite different from the one provided on teh wiki) (in bold the core differences) (NGramFilterFactory is the class that replace the fts_squat "partial=3 full=15", everything else is just a big hammer to smash a tiny fly) - One need to remove the "managed-schema" file in the
2003 Dec 11
0
SV: How to start RMySQL
Jeff, the tip on http://stat.bell-labs.com/RS-DBI/download/index.html (at the bottom of the page) may help. Trond Rafoss -----Opprinnelig melding----- Fra: Jeff Lee [mailto:JLee at acamllc.com] Sendt: 10. desember 2003 23:34 Til: 'r-help at stat.math.ethz.ch' Emne: [R] How to start RMySQL I am a newbie in R and want to use MySQL database. Here is what I have and done. R 1.8.0 mysql
2019 Jun 25
3
methods package: A _R_CHECK_LENGTH_1_LOGIC2_=true error
**Maybe this bug needs to be understood further before applying the patch because patch is most likely also wrong** Because, from just looking at the expressions, I think neither the R 3.6.0 version: omittedSig <- omittedSig && (signature[omittedSig] != "missing") nor the patched version (I proposed): omittedSig <- omittedSig & (signature[omittedSig] !=
2018 Dec 05
5
Solr
THen the Squat shall be maintained until the SOlr plugin is upgraded, as Squat does resolve the problem (fts, partial search, etc...) On 2018-12-05 12:20, Aki Tuomi wrote: > It seems we forgot to document that "break-imap-search" was dropped in v2.3. That has now been updated. > > Also Solr does not support prefix/substring search unless you configure solr to support it.
2019 Apr 23
2
SolrCore 'dovecot' is not available due to init failure: fieldType 'text_general' not found in the schema
Hello, it seems an mismatch of schema file provided by dovecot-2.3.5.2 [root at mail conf]# pwd /var/solr/data/dovecot/conf # Below solrconfig.xml is from Solr-8.0.0. [root at mail conf]# grep text_general solrconfig.xml <str name="queryAnalyzerFieldType">text_general</str> field types. Text content will be indexed as "text_general" as <str
2006 Nov 13
0
segfault in RMySQL dbConnect error handling
Hi there. I see in a post from 2002 that you got the following problem with RMySQL: > con <- dbConnect(m) Process R segmentation fault at Wed Aug 28 08:21:11 2002 I have the same problem today: drv=dbDriver("MySQL") dbConnect(drv) # or with pretty much any other failing options Program received signal SIGSEGV, Segmentation fault. 0x00002b28d60c9fa0 in strlen () from
2019 Jun 27
2
methods package: A _R_CHECK_LENGTH_1_LOGIC2_=true error
Henrik, If a minimal reprex is hard to construct, could you perhaps instrument your version of R to include a browser() call at the start of the else if(!all(signature[omittedSig] == "missing")) { branch, run the code that triggers the issue for you (and must hit that branch) and tell us what the "signature" and "omittedSig" objects look like at that point?
2004 Jul 29
3
Help w/ matrix calc
Dear All, Help is needed! I have a matrix with frequencies of fish larvae per length class (var. sl) and age-group (var. median.no) obtained with >k<-table(cut(sl,(5:22)),median.no) >k[2:5,1:5] #to ilustrate k 4 5 6 7 (6,7] 3 1 0 0 (7,8] 3 0 1 0 (8,9] 3 4 3 5 (9,10] 3 15 7 13 from this matrix I would like to obtain the mean age per length class i.e.
2009 Feb 23
0
Segmentation Fault still exists
Hi All, Sorry to bother everyone again.Ofcourse Prof Ripley ,Yihui and Uwe had replied to my email.But this segmentation fault error was not solved.I agree with Prof Ripley,as he said my R and all other configurations,are very old.But what i don't understand is ,i was able to run analysis till few days before,and why suddenly this error. *The configuartions i use:---* *R-version * *>
2007 May 27
2
[Bioc-devel] promptClass
promptClass fails to identify methods associated with the class. Here is a fix: Index: promptClass.R =================================================================== --- promptClass.R (revision 41719) +++ promptClass.R (working copy) @@ -165,7 +165,7 @@ if (nmeths > 0) { .meths.body <- " \\describe{" for (i in 1:nmeths) { - .sigmat
2008 Feb 24
2
Generic Functions
Hi I have some problems in defining new generic functions and classes. Just have a look at the following example: require(fPortfolio) setClass("PROBECLASS", representation( type="character" ) ) isGeneric("setType<-") #Returns TRUE #I would like to define a specific function for