similar to: building R 1.7.0 under RH7.3 (PR#2808)

Hi All, While attempting to build R-patched using the Portland Group compiler suite on our dual Opteron 250 box running Scyld 29cz5 (based on RH, kernel 2.4.29), I get: make[5]: Leaving directory `/home/andy/Rbuild/R221-pgi/src/library/tools/src' make[5]: Entering directory `/home/andy/Rbuild/R221-pgi/src/library/tools/src' pgcc -I../../../../include -I/include -I/include/CC -fpic

Hi, Can anyone advise me on how to compile R with Portland Group compiler on a Opeteron machine with Red Hat Enterprise Linux WS release 4 installed? I've edit config.site file to pick portland group compilers instead of gcc. Here is the list of modified flags: CC=/usr/pgi/linux86-64/6.0/bin/pgcc CFLAGS='-g -O2' CPPFLAGS='-I/usr/pgi/linux86-64/6.0/include

Dear R-devel, [I'm not sure if this is appropriate for R-devel. If not, I'm more than happy to move it to R-help.] As those of you who saw my post on R-help know, I've been trying to build R-patched on a dual Opteron box running Scyld Beowulf, using the PGI 6.1 compilers. The build went fine, but I couldn't get it to pass make check-all. Jennifer Lai, who reported success with

Hi, I built R with Portland Group compiler, but I noticed one thing that when I ran configure for the first time on AMD machine, I got the following error: checking whether the C compiler works... configure: error: cannot run C compiled programs. If you meant to cross compile, use `--host'. See `config.log' for more details. so I tried to set host=x86_64-unknown-linux-gnu,

Dear R-users, Has any one compiled R-1.9.1 successfully with Portland pgcc pgCC and pgf77? I can not configurate it with ./configure since it told me checking for Fortran name-mangling scheme... configure: error: cannot compile a simple Fortran program Can any one give me some advice. Thank you. My platform: Linux-2.4.26, pentium4, portland compiler 5.1

Full_Name: Mike Pacey Version: 2.6.0 OS: SuSe Linux 9.3 x86_64 Submission from: (NULL) (194.80.32.10) A "vanilla" version of R configures and compiles without a problem on my system. Switching to using the PGI compiler configures correctly (see the values at the bottom fo thismessage), but compilation aborts with: pgcc -I../../src/extra/zlib -I../../src/extra/bzip2

I am working on a SLES 10 cluster with R available on it. To better use my resources, I want to use Rmpi, but I am having a difficult time installing it. I have set the $R_LIBS variable correctly. The MPI libraries are available through the PGI compiler, but this R instance was compiled with GCC. The Rmpi package can be compiled and installed with %R CMD INSTALL Rmpi_0.5-5.tar.gz

I am trying to build R with 64bit support so I can access more than 2GB of memory on an IBM running AIX. (IBM NightHawk II RS/6000 node with 16 64-bit, 375-MHz POWER3 CPUs and 32 GB of memory, if you want specifics) The 32bit install required little tweaking, but the 64 bit is sufficiently complicated that I thought I would report my findings here and ask for help with the latest (and hopefully

Hi, Has anyone had any luck in using portland group compiler to build R(-devel) with AMD's pgi compiled ACML library? I've downloaded the packages and set LD_LIBRARY_PATH, and run configuration script as follow: % ./configure --prefix=/usr/local/R.pgcc --with-blas='-lacml' However, it failed to pick up double complex BLAS, checking for sgemm_ in -lacml... yes checking

Doh! turns out I was using a newer feature of S-PLUS that is not supported in R, or at least was generating the parse error. replace all a = b with a <- b (except in arguments, naturally ...) Sorry to bother anyone ... smooth sailing ahead. > Date: Mon, 4 Jun 2001 10:03:56 -0600 (MDT) > From: Tim Hoar <thoar at cgd.ucar.edu> > Reply-To: Tim Hoar <thoar at ucar.edu>

I am trying to compile R-devel (R-devel_2006-05-17.tar.gz) on Red Hat Enterprise Linux AS release 3 (Taroon Update 7) using the Portland Group compiler 6.0. (I have not yet successful compiled R on this configuration, so I don't know if this is a new problem.) I get an error pgcc -L/usr/local/pgi/linux86-64/6.0/libso -L/usr/lib64 -o dftables dftables.o ../dftables chartables.h

Hi, we have installed R-2.8.1 using the current pgi compiler (8.0.2) for AMD64 on a SLES9 system. When I try to install "Matrix" everything is fine until the last step. make[1]: Leaving directory `/tmp/R.INSTALL.TW3399/Matrix/src/AMD' pgCC -L/usr/lib64 -L/usr/X11R6/lib64 -pgf90libs -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o

I am having a problem creating JPEG's ... but just lately I had 1.3.1 installed properly on a Solaris 2.6 platform and everything was working fine UNTIL last Wednesday, when I issued the fateful update.packages() and went to lunch. When I came back, one of my cohorts informed me he could no longer create jpeg's in the fashion he was accustomed: > X11() > plot(1:10) >

I am trying to compile R-2.3.0 (both first release and patched 2006-05-10) on Red Hat Enterprise Linux AS release 3 (Taroon Update 7) using the Portland Group compiler version 6.1 and the notes from Jennifer Lai on p33 of "R Installation and Administration" version 2.3.0 (2006-04-24). I have not used this compiler before, so it is possible things are messed up more than usual, even

Hello, I am building a package to read in a pretty common atmospheric data format and create a SKEW-T, log p diagram (also very common for the atmospheric community). The problem is this: How should one address the (ASCII) data files so that the examples find them? I have read through the "Writing R Extensions" document and still have a problem. There seems to be some sort of

Some machines in our department use RedHat 5.2 Linux but, to maintain consistency with other machines, the compilers as from egcs-1.0.3, as shown below. When I compile R-0.63.3 on these systems I can't pass the tests in "make check". The base-Ex.R file stops execution with the error shown below. ... Running all help() examples ... ../../bin/R --vanilla < base-Ex.R >

Hi All Guys, I just join this list I am going to experiment a crossover connection between a WinME box and a RH7.3 Box. The setting of WinME is without problem. It can communicate with another WinME box or a WinXP box with crossover connection. I don't use password to login in both boxes I have Samba-2.2.3a running on a RH7.3 box #service smb start/stop Everything OK without complaint

Hi, We have a couple of RH7.3 systems. Both have samba installed and they were running well before. Now, one system's samba shows a problem after the system rebooting yesterday. Samba is still running and all windows 95, 98 users can access this RH7.3 system without any problem, but windows NT/2000/XP users cannot access it now. Before the rebooting, all windows (including nt/2k/xp)

hi, Can I use quota with ext3 on a loaded system without experimenting deadlocks nowadays? I'm using rh7.3 kernel 2.4.18-19.7.x thanks -- Juan Pablo Abuyeres <jpabuyer@tecnoera.com>

Hi Folks, I have an internal HDD running under RH7.3. I would like to purchse a second HDD(usb external) of same geometry, and use it as a bootable snapshot of the first internal HDD. I wish to make a whole disk bootable backup regularly via this method. Is this feasible ? How should I approach this ? Any advice and/or documentations are greatly appreciated. Thanks in advance. karhong. --