similar to: docs, examples, man pages (PR#2711)

Hi, I would appreciate help with the following model <<1>>= gunload <- read.table(hh('datasets/gunload.dat'), header = T) gunload$method <- factor(gunload$method, labels = c('new', 'old')) gunload$physique <- factor(gunload$group, labels = c('slight', 'average', 'heavy')) gunload$team9 <- factor(rep(1:9, each = 2)) @ This

Dear R users, using dotplot (R1.2.0, WinNT4.0), I am trying to change the character size of the labels of the points: > # example > data(VADeaths) > dotplot(VADeaths, main = "Death Rates in Virginia - 1940") > # I'd like to have smaller character size of the labels (for age and population groups) > ?dotplot > # for argument "cex", this says:

The Design library has been fully ported to R except for Cox proportional hazards regression modeling (using Therneau's survival package) which will be available in about two weeks. It will take much longer to make all the example code executable, is it currently contains many examples for which data are not provided. Thanks to Xiao Gang Fan <xiao.gang.fan1 at libertysurf.fr> who

The Design library has been fully ported to R except for Cox proportional hazards regression modeling (using Therneau's survival package) which will be available in about two weeks. It will take much longer to make all the example code executable, is it currently contains many examples for which data are not provided. Thanks to Xiao Gang Fan <xiao.gang.fan1 at libertysurf.fr> who

I''m writing an acts_as_* plugin and am trying to BDD it. Ideally my specs would look like: describe ActsAsCloneable, " basic cloning" do load_example_classes School.class_eval do acts_as_cloneable end before(:each) do @old_school = School.create! :name => "Baylake Pines", :city => "Virginia Beach", :guid => "abc123"

Hi, I am using coxph in simulations and I want to store the "robust se" (or "se2" in frailty models) for each replicate. Is there a function to retrieve it, like vcov() for the variance estimate? Thanks! Lei Liu Assistant Professor Division of Biostatistics and Epidemiology Dept. of Public Health Sciences School of Medicine University of Virginia 3181 Hospital West

Hi Folks, If you need to send data from Java to R you may consider using the JDataFrame API -- which is used to convert data into JSON which then can be converted into a data frame in R. Here's the project page: https://coherentlogic.com/middleware-development/jdataframe/ and here's a partial example which demonstrates what the API looks like: String result = new JDataFrameBuilder()

Hello! I downloaded a package "multtest" (from bioconductor.org) in R, and installed it by 'R CMD <package>' (after unzipping and taring). The problem is when I say 'library(multtest)' in R, the following error is generated: Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library

Full_Name: Frank Harrell Version: 1.6.1 OS: RedHat 8.0 Linux Submission from: (NULL) (128.143.108.90) I get an error when trying to load a URL that contains a file that was saved using save(object, compress=TRUE): > load('http://hesweb1.med.virginia.edu/biostat/s/data/sav/kprats.sav') Error in gzfile(file, "rb") : unable to open connection In addition: Warning message:

Dear R-helpers, How do I transform v <- c('insd-otsd', 'sppr-unsp') into c('insd--otsd', 'sppr--unsp') ? _____________________________ Professor Michael Kubovy University of Virginia Department of Psychology USPS: P.O.Box 400400 Charlottesville, VA 22904-4400 Parcels: Room 102 Gilmer Hall McCormick Road Charlottesville, VA 22903

Hi there, I have a question on fitting data by coxme. In particular I want to fit a random intercept and random slope cox model. Using the rats dataset as an example, I generated another covariate x2 and want to specify a random slope for x2. Here is my code: x2=matrix(rep(runif(50), 3), 50, 3) x2=as.vector(t(x2)) rats2=cbind(rats, x2) But when I used the coxme function as follows, it gave

df1 <- data.frame(a = LETTERS[1:2], b = LETTERS[3:4], c = 1:2) I am looking for an idiom that swaps the elements of df$a and df$b when (e.g.) df$c == 2, resulting in df2 <- data.frame(a = LETTERS[c(1, 4)], b = LETTERS[c(3, 2)], c = 1:2) _____________________________ Professor Michael Kubovy University of Virginia Department of Psychology USPS: P.O.Box 400400 Charlottesville, VA

Hello list! I have been instructed to install very specific version numbers of httpd and php on the company web servers. Here's what I've tried so far [root at ec2-50-17-114-126 ~]# yum install php-5.2.17-1.w5.i386 Loaded plugins: fastestmirror Loading mirror speeds from cached hostfile * addons: yum.singlehop.com * base: mirror.rackspace.com * epel: nas1.itc.virginia.edu * extras:

Dear r-helpers, After successfully running require(nlme) vfr.lmL <- lmList( estimate ~ (slant + respType + visField + hand)^2 | subject, vfr ) pairs(vfr.lmL, id = 0.01, adj = -0.5) # Pinheiro & Bates (p. 141) produces the following error: Error in sprintf(gettext(fmt, domain = domain), ...) : object "form" not found Any guesses as to what I may have done wrong?

Hi there, After I fitted a cox model, I used vcov to obtain the variance of the parameter estimate. It worked correctly in R 1.9.1. But it failed in R 2.0.0 and the error message is Error in vcov(cox.1) : no applicable method for "vcov" I don't know if it is a bug or there is some update on this function. Thanks! Lei Liu Assistant Professor Division of Biostatistics and

I am wondering if it is possible to perform the following two basic functions with primitive R functions. I know I could write functions for either, but it seems as though they are probably built-in somewhere. 1) Fill out a vector to a desired length with missing values or zeros. So, x<-c(3,4,5) f(x,5) 3,4,5,NA,NA 2) Find the [row,col] location of a particular value in a matrix, eg

Hi, Does anyone know how to do a coord_trans() in which the y-axis is tranformed into (for example) -1000/y? Thanks, _____________________________ Professor Michael Kubovy University of Virginia Department of Psychology USPS: P.O.Box 400400 Charlottesville, VA 22904-4400 Parcels: Room 102 Gilmer Hall McCormick Road Charlottesville, VA 22903 Office: B011

I would like to suppress the text 'Scatter Plot Matrix' that appears under the plot. Could someone please suggest how? _____________________________ Professor Michael Kubovy University of Virginia Department of Psychology USPS: P.O.Box 400400 Charlottesville, VA 22904-4400 Parcels: Room 102 Gilmer Hall McCormick Road Charlottesville, VA 22903 Office: B011

Dear r-helpers, Does anyone have a straightforward example of putting together three unrelated (expect for a common y-axis) xyplot() figures in what would be in base graphics a par(mfrow = c(1, 3)) arrangement? _____________________________ Professor Michael Kubovy University of Virginia Department of Psychology USPS: P.O.Box 400400 Charlottesville, VA 22904-4400 Parcels: Room 102

Dear R-helpers, It is not clear to me how you get measurement.error SD when you have a single dataset, and it is not clear to me how sensitive SIMEX is to errors in the estimates of measurement error. Could someone please point me to the relevant literature? _____________________________ Professor Michael Kubovy University of Virginia Department of Psychology USPS: P.O.Box 400400