similar to: silent option for library function

There was a discussion on r-help of getting the output from print.packageInfo into a file. Spencer and I have added a file= argument to print.packageInfo for consideration in R. Had this been available it would have simplified the answer to that thread. If the file= argument is used then the packageInfo information is sent to the file specified rather than displayed using file.show .

> R.version.string [1] "R version 2.1.0, 2005-03-17" I don't see anything in either https://svn.r-project.org/R/trunk/NEWS or in the Changes file for R-2.1.0 about changes in package.skeleton() (nor in the help page), but when I run this function, all the .Rd files produced are of the data format even if all I have in my .GlobalEnv are functions. A trivial example is to run the

Hi everyone, Has anyone written a parser in Java for either the ASCII or binary format produced by save()? I need to parse a single large 2D array that is structured like this: list( "32609_1" = c(-9549.39231289146, -9574.07159324482, ... ), "32610_2" = c(-6369.12526971635, -6403.99620977124, ... ), "32618_2" = c(-2138.29095689061, -2057.9229403233, ... ),

Dear list, I'm trying to suppress/redirect/squash the output from commands like install.packages, or download.file. The problem is that none of: sink(..., type="message"), sink(..., type="output"), capture.output, suppressMessages are quite doing the trick. Output gets written to the stderr stream, despite any combination of the above suppression commands. According to

Hi, just a little wish : Could we have one (or maybe more) standardized optional tag(s) for package DESCRIPTION files to cover svn revision info? This would be very useful for bug reporting... I know that any developer is already free to append corresponding lines to DESCRIPTION files to do something of this sort --- e.g. lines like LastChangedDate: {$LastChangedDate: 2009-03-31 $}

I would like to turn off all the messages during library(aPackage) or require(aPackage) I tried different commands: invisible, capture.output, sink but none of them is working. For example, loading VGAM, gives a lot of unnecessary messages: > library(VGAM) Attaching package: 'VGAM' The following object(s) are masked from package:splines : bs The

when using R CMD check mypkg I get the error message ... * checking R files for library.dynam ... OK * checking generic/method consistency ... WARNING Error in .loadPackageQuietly(package, lib.loc) : Error in parse(file, n, text, prompt) : syntax error on line 95 Execution halted * checking for assignment functions with final arg not named 'value' ... WARNING Error in

I am trying to package some code that is a tweak to the survival package. When I asked earlier, the list consensus was that it would be best to do this as a separate package, dependent on survival. This is proving a bit tricky. I have some run-time and compile time concerns. Run-time, my R code needs R code from survival, and my C code needs C functions from survival. Will this all be

I have a TDM-400P with one FXO module. On an incoming call, I have set Asterisk to dial my phone (exten => s,1,Dial(IAX2/carey)), which is basically the only thing in my dialplan. When the call is answered by the PSTN phone first, or when the ringing call is hung up, Asterisk keeps ringing for 5+ seconds, which causes trouble (the answering of already answered calls). I noticed in the

Hi!I'm doing a little data importing from .cel files, > setwd("/home/mandova/celfiles") > mydata<-ReadAffy() Error in sub("^/?([^/]*/)*", "", filenames, extended = TRUE) : unused argument(s) (extended = TRUE) Then I tried > filenames<-paste("GSM",c(seq(138597,138617,1)),".cel",sep="") >

http://bugs.freedesktop.org/show_bug.cgi?id=10920 Summary: glxgears on AGP 10de0028 NV5 [RIVA TNT2/TNT2 Pro] works! (but slowly) Product: xorg Version: 7.2 Platform: x86 (IA32) OS/Version: Linux (All) Status: NEW Severity: normal Priority: medium Component: Driver/nouveau

http://bugs.freedesktop.org/show_bug.cgi?id=17357 Summary: NV4B 10DE:0393 funny stripes in video flash when using nouveau Product: xorg Version: unspecified Platform: Other OS/Version: Linux (All) Status: NEW Severity: normal Priority: medium Component: Driver/nouveau

I am getting the following error in my script. I am very very new to R and have obtained this script from another person. #read file in (dummy data) starburst.plot<-function(affy.fold, affy.FDR)(ifelse( ((affy.fold) >=0), -1*log10(affy.FDR), 1*log10(affy.FDR))) starburst.plot<-function(meth.fold, meth.FDR)(ifelse( ((meth.fold) >=0), -1*log10(meth.FDR), 1*log10(affy.FDR))) At my next

iterations <- 100 nvars <- 4 combined <- rbind(scaleMiceTrain, scaleMiceTest) reducedSample <- combined reducedSample <- subset(reducedSample, select = -pID50) reducedSample <- subset(reducedSample, select = -id) for (i in 1:iterations) { miceSample <- sample(combined[,-c(1,2)],nvars, replace=FALSE) miceSample$pID50 <- combined$pID50 miceTestSample <-

Super, Thanks On Fri, Sep 22, 2017 at 4:57 PM, Boris Steipe <boris.steipe at utoronto.ca> wrote: > > a <- c("<0.1", NA, 0.3, 5, "Nil") > > a > [1] "<0.1" NA "0.3" "5" "Nil" > > > b <- as.numeric(a) > Warning message: > NAs introduced by coercion > > b > [1] NA NA 0.3

myDF <- data.frame(a = c("<0.1", NA, 0.3, 5, "Nil"), b = c("<0.1", 1, 0.3, 5, "Nil"), stringsAsFactors = FALSE) # you can subset the b-column in several ways myDF[ , 2] myDF[ , "b"] myDF$b # using the column, you make a logical vector ! is.na(as.numeric(myDF$b)) # This can be used to select the

http://bugs.freedesktop.org/show_bug.cgi?id=10858 Summary: glxgears with mesa-git on PCI 10de0322 (NV34) GeForce FX 5200 crashes X Product: xorg Version: 7.2 Platform: x86 (IA32) OS/Version: Linux (All) Status: NEW Severity: normal Priority: medium Component: Driver/nouveau

Hi, Lets say this was a dataframe where I had two columns a <- c("<0.1", NA, 0.3, 5, "Nil") b <- c("<0.1", 1, 0.3, 5, "Nil") And I just want to remove the rows from the dataframe where there were NAs in the b column, what is the syntax for doing that? Thanks in advance On Fri, Sep 22, 2017 at 5:04 PM, Shane Carey <careyshan at

http://bugs.freedesktop.org/show_bug.cgi?id=10933 Summary: nouveau defaults to first graphics card in system even when xorg instructed differently Product: xorg Version: 7.2 Platform: Other OS/Version: Linux (All) Status: NEW Severity: normal Priority: medium Component: Driver/nouveau

Running rsync 2.4.7pre1, using the --backup-dir option, I just realized today that file ownerships and permissions of backed up files are not preserved. In other words, if rsync moves an obsolete file to the backup dir, it's ownership seems to revert to root:root, and permissions change, as well. We are also using the -a (archive) option, by the way, which should mean "preserve