similar to: (PR#2005) R_HOME/etc/Renviron.site not interpreted on windows

Hello, Could someone please tell me why the following doesn't work: I have a file C:\Program Files\R\rw1051\etc\Renviron.site, which contains the line: R_LIBS= "C:/Jim/LocalR-Libraries/FromCran"; "C:/Jim/LocalR-Libraries/Cantata" >From the documentation, I gather that I have put this file in the default location, but to be safe I also explicitly set the R_ENVIRON

Hi everyone, Two minor points about ?.Renviron. 1) If R_ENVIRON is not set then R defaults to `${R_HOME}/etc/Renviron', not `${R_HOME}/etc/Renviron.site' as stated. 2) In the details, there is a missing "way" in "`value' is processed in a similar to a Unix shell." Cheers, Jonathan. --please do not edit the information below-- Version: platform =

ISSUE: It looks like Rgui.exe never processes ~/.Renviron - only ./.Renviron. REPRODUCIBLE EXAMPLE: On Windows, create the following ~/.Renviron and ~/.Rprofile files: C:\Users\alice> Rscript -e "cat('FOO=123\n', file='~/.Renviron')" C:\Users\alice> Rscript -e "cat('print(Sys.getenv(\'FOO\'))', file='~/.Rprofile')" and launch

Dear R-devel: i have noticed a little wrinkle in R packaging for RPM systems and have communicated with the package maintainer at RedHat Tom Callaway (see far below). Here is the question: Where does R Core Team want packagers to fiddle around with R library paths? Currently, the RPM Spec file used for EPEL's R (For Fedora/Redhat/Centos,etc) adds a line in R_HOME/etc/Renviron like this:

Hi, I have a simple R script for printing arguments cat > printargs.R << EOF args = commandArgs() print(args) q() EOF To run this script, first I set PATH to ~/src/R-2.6.2 and execute > R --no-save < printargs.R I want to run this script with different R versions by defining an .Renviron file in the same directory as printargs.R cat >

Let me first admit: I am experiencing this bug on a precompiled binary of R for windows, and I know these are not supported. I am not asking for support, but I thought the R developers would want to know about this. # Define: foo.page <- function(x) x # Then, foo.page("a") # actually invokes the pager (!) on object named "a" (if one is defined). # same thing happens

Hi, I am interested in customizing the installation of R. I have gone through the ?R Installation and Administration? manual. But some of the stuff is not clear to me and I would like to get clarifications on the following points (for a Windows installation with R_HOME=C:\\R\\R-2.9.1 ) : 1. I understand that I need to create a file, .Renviron with the following path : R_HOME\\etc\\.Renviron where

Hi, The following seems to be a bug introduced with version 1.8.0 (it worked without error on my installation of version 1.7.0): > test <- data.frame(time = I(c("2003-08-19:22:55:57"))) > test[["time"]] <- strptime(test[["time"]], format = "%Y-%m-%d:%H:%M:%S") Error in "[[<-.data.frame"(`*tmp*`, "time", value =

Dear Johannes, Dear Dirk, Thanks a lot for helping. Here is the missing information. Here is how I installed R. This is basically how Martin Maechler showed me to install R under Ubuntu (in several versions so that they are also recognized by ESS). My goal is to adjust this to make it work for Debian: 1) sudo emacs /etc/apt/sources.list # then add: deb

On Mon, 03-07-2017, at 12:18:36, Dirk Eddelbuettel <edd at debian.org> wrote: > On 3 July 2017 at 13:05, Ramon Diaz-Uriarte wrote: > | If I might chime in, I'd like to add my vote to the "users should be able > | to use install.packages and should be able to install bioconductor > | packages with biocLite". > | > | Longer story > | ============ > | >

[RFC = Request for Comments] { Yes, the documentation for .Renviron is really not there (but the FAQ...); the rest is in ?Startup } In R's Startup (on Unix only??) {unless --no-environ is specified} ~/.Renviron (if there) is read as an 'sh' script before R is called, then R looks ((for the site-wide Rprofile and then)) for .Rprofile in the current directory and then for

Hi, I have Debian Testing running on a Lenovo Thinkpad X1 Carbon (2015, 3rd gen.). I would like to have a package library independent of the installed R version. Under Ubuntu, I used to have the following line in ~/.Renviron: R_LIBS=/usr/local/R/library:/usr/lib/R/site-library This worked fine and /usr/local/R/library showed up in .libPaths(). However, under Debian (with the same ~/.Renviron),

Dear List, Further to my earlier email, I note that, for me at least, R CMD check is *not* reading R_LIBS from ~/.R/check.Renviron on R 2.15.2 patched (r61228) and R Under Development (r61660). The only way I can get R CMD check to look for packages in a user-supplied library is by explicitly exporting R_LIBS set to the relevant directory. R CMD build *does* read R_LIBS from ~/.R/build.Renviron

hi people I need to make an application with Java and R. I installed the library rJava using the command R - install.packages (rJava), and i configured my $ R_HOME = / Library / Frameworks / R.framework / Resources. My SO is OSX. When I run an exemple in eclipse, it gives me the following error: cannot find system Renviron Fatal error: unable to open the base package I need help. Thanks

On 3 July 2017 at 13:05, Ramon Diaz-Uriarte wrote: | If I might chime in, I'd like to add my vote to the "users should be able | to use install.packages and should be able to install bioconductor | packages with biocLite". | | Longer story | ============ | | Two cases (I've just faced this morning), where | /usr/local/lib/R/site-library/ was not user-writeable: | | 1. Students

Hello experienced R-ers, I'm converting from S-Plus Win 98SE to SuSE 8.1, R 1.62 and have run into som problems. 1) When I use help.start() netscape comes up OK and all links are accessible except "Search Engine & Keywords" : search doesn't work and the keywords from base doesn't respond either. ?command within R gets netscape running and works OK. 2) I haven't

Our lab has a lot of different unix boxes, with different hardware, and I'm assuming (perhaps wrongly) that by setting a per-user package installation directory, the packages will only work on one type of hardware. Our systems are all set up to share the same home directory (and, thus, the same .Renviron file) -- so, is there a way to set, in the .Renviron file, per-computer or

When I load an add-on package, is there any way to specify where it ends up in the search path (as with the pos argument to attach())? From the documentation for library(), this doesn't seem like an option. (I know I can detach packages and then reload them in the order I want; I'm looking for a less clumsy way.) Thanks, Jim James A. Rogers, Ph.D. <rogers at cantatapharm.com>

A heuristic runs via the r-base-core package postinst. It is intended to use the result from Debian's paperconf(1) toool, and to update the R environment variable R_PAPERSIZE accordingly. This apparently broke some time ago when R changed to a dual variable setup, and my regexp didn't notice. Does anybody use this, or is it ok if I simply disable this in Debian? In that case we simply

Regarding user's home and working directories, is Rprofile just an old name of Renviron? or (can) should we have both files with different type of definitions? (talking about R.1.4.0 in linux). Thanks Agus Dr. Agustin Lobo Instituto de Ciencias de la Tierra (CSIC) Lluis Sole Sabaris s/n 08028 Barcelona SPAIN tel 34 93409 5410 fax 34 93411 0012 alobo at ija.csic.es