Displaying 20 results from an estimated 5000 matches similar to: "compiling on Solaris 7 (PR#1520)"
2002 Jan 17
2
Solaris 2.6 Compile (PR#1268)
Full_Name: Geordon Marchak
Version: R-1.3.1
OS: Solaris 2.6
Submission from: (NULL) (199.67.239.91)
Got the following error when compiling on Solaris 2.6 with the standard GNU
gcc package (from the Sun site). BTW - linux compiles no problem (and fast
too :-)
# make
`Makedeps' is up to date.
gcc -I. -I../../src/include -I../../src/include -I/usr/local/include
-DHAVE_CONFIG_H -g -O2 -c
2014 Sep 07
1
lbfgsb from C/C++
Hi,
I would like to call R's lbfgsb function from my C/C++ code by including
R_ext/Applic.h and linking against libR.
Currently, I am allocating memory for x (and the other input arrays for
lbfgsb) in my C/C++ code via malloc/new. However, this gives a segmentation
fault when executing the program.
I tried to allocate x via PROTECT(x = NEW_NUMERIC(n)); x_p =
NUMERIC_POINTER(x);.
This compiles
2008 Mar 07
1
parameters for lbfgsb (function for optimization)
Can anyone help me with lbfgsb (function for optimization)?
It takes the following parameters:
void lbfgsb (int n, int lmm, double *x, double *lower,
double *upper, int *nbd, double *Fmin, optimfn fn,
optimgr gr, int *fail, void *ex, double factr,
double pgtol, int *fncount, int *grcount,
int maxit, char *msg, int trace, int nREPORT);
What do I put for parameter ex (11th parameter)? I looked at
2000 Aug 15
1
Defective pointer to tech report (PR#634)
Full_Name: Rod Montgomery
Version: 1.1.0
OS: Windows-95
Submission from: (NULL) (38.26.56.3)
File R-1.1.0/src/appl/lbfgsb.c --
Comment in code says two papers describing underlying math are in
ftp://ece.nwu.edu/pub/lbfgs/lbfgs_bcm/
but that directory seems not to exist.
(Actually, the comment does not give a URL - it just says
to look in that directory on that FTP server.)
Paper [1] does
2000 Apr 24
1
compiling R-1.0.1 under Solaris
Dear all,
I am trying to compile R version 1.0.1 under Solaris on a SUNsparcUltra10.
Note that I'm doing this in my home directory as I cannot do it as root.
The configure script seems to run correctly and issues as the last few lines:
-----------------------------------------------
...
R is now configured for sparc-sun-solaris2.7
Source directory: .
Installation directory:
2020 May 04
1
error in message printed by L-BFGS-B
Hi
I have a FORTRAN version of the L-BFGS-B algorithm and I was comparing it
to the code in the lbfgsb.c file available at R-4.0.0.tar.gz
Everithing looks the same, except for those two lines that must be printed
by the prn3lb function in case of an error (lines 3559 and 3561 in
lbfgsb.c):
case -5: Rprintf("l(%d) > u(%d). No feasible solution", k, k); break;
case -7:
2008 Jan 19
1
R_alloc segfaults
I want to write a little stand-alone C program that calls R_alloc, but
I get a segmentation fault:
int main(int argc, char** argv){
double* d = (double *)R_alloc(2, sizeof(double)); // <- segmentation fault!
return 0;
}
gdb reveals that sizeof(double) evaluated to 0:
> R_alloc (nelem=2, eltsize=0) at memory.c:1649
so it results in the segfault later.
This is how I compile my
2005 Mar 29
1
final stages of installing R - please help?
Hello,
This morning I downloaded, unzipped, and compiled the latest version of
R for unix, in my HOME/APPLICATIONS directory.
My current unix machine is a sparc-sun-solaris2.9, running SunOS 5.9.
Here are the last few lines of the output following ./configure:
R is now configured for sparc-sun-solaris2.9
Source directory: .
Installation directory: /usr/local
C compiler:
2006 Sep 02
1
nonlinear least squares fitting Trust-Region"
Dear Mr Graves,
Thank you very much for your response. Nobody else from this mailing list ventured to reply to me for the two weeks since I posted my question.
"nlminb" and "optim" are just optimization procedures. What I need is not just optimization, but a nonlinear CURVE FITTING procedure. If there is some way to perform nonlinear curve fitting with the
2004 Mar 30
5
optim-Bug (PR#6720)
Full_Name: Dr. Hans A. Kestler
Version: 1.8.1.
OS: Linux, Win, Mac OSX
Submission from: (NULL) (134.60.73.116)
The code below produces after a different number of iterations i the following
error:
Error in optim(par = rep(0.5, length(edges)), loglik, method = "L-BFGS-B", :
non-finite value supplied by optim
This was reproducible on different machines (Mac G4 OSX, AMD Opteron
2002 Jan 28
1
Symbol referencing errors...
This is the error I get when trying to install R-1.3.1 on my Solaris 2.6
box. Any assistance would be greatly appreciated.
g77 -g -O2 -c xxxpr.f -o xxxpr.o
gcc -o R.bin CConverters.o Rdynload.o RNG.o apply.o arithmetic.o
array.o at
trib.o bind.o builtin.o character.o coerce.o colors.o complex.o
connections.o
context.o cov.o cum.o dcf.o datetime.o debug.o devPS.o devPicTeX.o
deparse.o d
2007 Oct 13
1
R API - optim
I am trying to use the R API to call optim functions (nmmin, vmmin, lbfgsb,
etc.) through a C program but I couldn't find the shared library to link
under the R-2.6.0 build which is compiled under Linux (REL5).
main.cpp:35: undefined reference to `Rf_initEmbeddedR(int, char**)'
main.cpp:41: undefined reference to `nmmin'
Thanks in advance for any help.
------------------------
2001 Jan 25
1
problems compiling R under digital unix 4.0d (PR#826)
Dear Sirs,
I am trying to compile R v1.2.1 under Digital Unix 4.0D.
The configure-script runs without any problems but during 'make' I receive
the following error-message:
[......]
g77 -mieee -g -O2 -c dtrco.f -o dtrco.o
g77 -mieee -g -O2 -c dtrsl.f -o dtrsl.o
g77 -mieee -g -O2 -c eigen.f -o eigen.o
g77 -mieee -g -O2 -c lminfl.f -o lminfl.o
ar cr libappl.a Rsock.o approx.o bakslv.o
2002 Feb 20
1
Pivoting in chol
Hi Everyone,
I have modified my version of R-1.4.1 to include choleski with pivoting
(like in Splus). I thought R-core might consider including this in the
next version of R, so I give below the steps required to facilitate
this.
1. Copied Linpack routine "dchdc.f" into src/appl
2. Inserted line F77_SUBROUTINE(dchdc) in src/appl/ROUTINES
3. Inserted "dchdc.f" into
2013 Oct 09
1
Version of L-BFGS-B used in optim etc
Hi.
I just noticed the paper by Morales and Nocedal
Remark on "Algorithm 778: L-BFGS-B: Fortran Subroutines for Large-Scale
Bound Constrained Optimization". TOMS 2011; 38(1): 7
http://www.ece.northwestern.edu/~morales/PSfiles/acm-remark.pdf
which describes a couple of improvements (speed and accuracy) to the
original Netlib code which AFAICT is that still used by optim()
via f2c.
2012 Oct 28
0
lbfgsb from C
Hi,
I wanted to use R's lbfgsb method for minimization from C. Unfortunately,
my toy examples always crashes (segmentation fault). What's wrong with it?
double eval(int n, double* par, void *ex) {
double result = 0;
for (int i=0; i<n; ++i) {
result += par[i]*par[i];
}
printf("result=%.2f\n", result);
return result;
}
void grad(int n, double *par, double *gr,
2016 Oct 08
4
optim(…, method=‘L-BFGS-B’) stops with an error message while violating the lower bound
Hi, Mark et al.:
Thanks, Mark.
Three comments:
1. Rvmmin was one of the methods I tried after Ravi
directed me to optimx. It returned NAs for essentially everything. See
my email of this subject stamped 4:43 PM Central time = 21:43 UTC.
2. It would be interesting to know if the current
algorithm behind optim and optimx with
2000 Oct 31
1
conflicting types for `Rf_stirlerr
I'm having trouble making todays development snapshot:
-DHAVE_CONFIG_H -g -O2 -c stirlerr.c -o stirlerr.o
stirlerr.c:34: conflicting types for `Rf_stirlerr'
../../src/include/R_ext/Mathlib.h:557: previous declaration of `Rf_stirlerr'
make[3]: *** [stirlerr.o] Error 1
[20] /home/mfa5/gilp/R-versions/R-devel : uname -a
SunOS mfa99579 5.6 Generic_105181-11 sun4u sparc SUNW,Ultra-5_10
2020 May 04
0
Error in message printed by lbfgsb
Hi
I have a FORTRAN version of the L-BFGS-B algorithm and I was comparing it
to the code in the lbfgsb.c file available at R-4.0.0.tar.gz
Everithing looks the same, except for those two lines that must be printed
by the prn3lb function in case of an error (lines 3559 and 3561 in
lbfgsb.c):
case -5: Rprintf("l(%d) > u(%d). No feasible solution", k, k); break;
case -7:
2016 Oct 10
0
optim(…?=, =?utf-8?Q?method=‘L-BFGS-B’) stops with an error message while violating the lower bound
>>>>> Spencer Graves <spencer.graves at prodsyse.com>
>>>>> on Sat, 8 Oct 2016 18:03:43 -0500 writes:
[.............]
> 2. It would be interesting to know if the
> current algorithm behind optim and optimx with
> method='L-BFGS-B' incorporates Morales and Nocedal (2011)
> 'Remark on ?Algorithm 778: