similar to: R on AIX

> On 23 Nov 2015, at 22:30 , aixtools <aixtools at gmail.com> wrote: > >> >> ./configure --enable-maintainer-mode ... Two things here - possibly irrelevant, but I'd avoid building in the source directory. (mkdir ../BUILD ; cd ../BUILD; ../R/configure) - don't turn on mantainer mode. You are not a maintainer, and if you want to play at being one, I think you

Dear all, after trying to compile R on our IBM Power3/AIX 5.1 machine I've been able to run it correctly. First of all I would thank all who responded my mails. I explain here how I've done it: First of all, it seems that configure and some shared libraries of AIX does not work at the same time. I tried to configure & make with the following environment vars CC=xlc F77=xlf CCC=xlC

Happily I got this to work, largely by trial-and-error. In hopes that this will help somebody else, my config.site ended up being: OBJECT_MODE=64 R_PAPERSIZE=letter CC=/usr/local/bin/gcc MAIN_LDFLAGS=-Wl,-brtl SHLIB_LDFLAGS=-Wl,-G Which is virtually identical to that recommended in R-admin: one of my problems was using "-W1,brtl" rather than "-W1,-brtl". This was R 2.0.1

Hope I am not sounding too much like a broken record - as far as 64-bit build on AIX is concerned. ** Short - 32-bit builds complete normally, 64-bit builds stop at "installing 'sysdata.rda'" with message: Error: Line starting 'Package: tools ...' is malformed! Execution halted *** Longer... I could file a bug - Importance, showstopper - but I would prefer to better

I am encountering a make error on an AIX 5.2 with R-2.3.0 and R-patched_2006-05-10 after successfully configuring them using gcc-4.1.0, gnu make, and the following configure options CC=/usr/local/bin/gcc F77=/usr/local/bin/gfortran CXX=/usr/local/bin/g++ MAIN_LDFLAGS=-Wl,-brtl SHLIB_LDFLAGS=-Wl,-G CFLAGS='-g -O' FFLAGS='-O' CXXFLAGS='-g -O' bash-3.00$ ./configure

Fellow R Enthusiasts.. I'm trying to compile R on AIX 5.2 32bit with gcc 3.3.2-5. I've tried both the development bundle R-devel_2006-01-25.tar.gz and the R-beta.tar.gz from about a month ago. In each instance, I'm using the following options prior to running "./configure --prefix=/usr/local/R": OBJECT_MODE=32 MAIN_LDFLAGS=-Wl,-brtl SHLIB_LDFLAGS=-Wl,-G

Fellow R Enthusiasts.. I'm trying to compile R on AIX 5.2 32bit with gcc 3.3.2-5. I've tried both the development bundle R-devel_2006-01-25.tar.gz and the R-beta.tar.gz from about a month ago. In each instance, I'm using the following options prior to running "./configure --prefix=/usr/local/R": OBJECT_MODE=32 MAIN_LDFLAGS=-Wl,-brtl SHLIB_LDFLAGS=-Wl,-G

Dear all, I have some problems to install R-2.4.1 on AIX 5.3. Configure string: ./configure --with-readline=no LDFLAGS='-bshared' --with-jpeglib=no --with-libpng=no --with-lapack=no --prefix=/cineca/prod/Bioinf/R-2.4.1 configure .site= #! /bin/sh CC=xlc F77=xlf MAIN_LDFLAGS=-Wl,-brtl SHLIB_LDFLAGS=-Wl,-G CXX=xlc CXXFLAGS=' -g -O' SHLIB_LDFLAGS=-W1, -G MAKE=gmake Configure ends

Hi, My previous message is appended: I'm still struggling with building on AIX. I updated my config.site to follow the suggestions from R-admin: MAIN_LDFLAGS=-Wl,brtl SHLIB_LDFLAGS=-Wl,-G This led to an error during configure: checking whether mixed C/Fortran code can be run... configure: WARNING: cannot run mixed C/Fortan code configure: error: Maybe check LDFLAGS for paths to Fortran

I have been struggling with this error message - and think I finally understand it's context. Start Line by line debugging shows me the function works: ... > saveRDS(val, mapfile) > val $variables $variables$IANA_HTTP_status_code_db [1] 0 1256 $variables$IANA_URI_scheme_db [1] 1256 3458 $variables$table_of_HTTP_status_codes [1] 4714 830 $references named list() $compressed

I am trying to get R-2.2.1 to pass make check on an AIX 5.2 at work (I know R-2.2.1 is not the latest release, but I encountered make errors in my attempts to install either R-2.3.0 or the R-patched_2006-05-10 on the version of AIX I am on. I will post those errors in a separate posting from this.) So far, configure and make finish without error for R-2.2.1 using gnu make, gcc-4.1.0, and

I am building from source on RHEL 4 and have run into a problem while running "make check": running code in 'lapack.R' ...make[3]: *** [lapack.Rout] Error 1 make[3]: Leaving directory `/opt/R/R-2.9.1/tests' make[2]: *** [test-Specific] Error 2 make[2]: Leaving directory `/opt/R/R-2.9.1/tests' make[1]: *** [test-all-basics] Error 1 make[1]: Leaving

On FreeBSD 10.2, I get the following error when compiling R from the Subversion trunk (with "configure && make"): cc -shared -L/usr/local/lib -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o mkdir ../../../../library/tools/libs installing 'sysdata.rda' Error in dyn.load(file, DLLpath = DLLpath, ...) :

I'm trying to get R 1.9.0 running on AIX 5.1 with the standard AIX compilers (xlc, xlf) and it is failing 2 of the tests, test-Reg in reg-tests-1.R like this: bash-2.05b$ tail -30 reg-tests-1.Rout.fail [,1] [,2] [1,] 1 3 [2,] 2 4 [3,] 1 3 [4,] 2 4 > stopifnot(typeof(res) == "list") > ## were not implemented in 1.8.1 > > > ## Date objects with

Prof Brian Ripley writes: > Second, we don't have all the pertinent information such as the > configure options used and the architecture (x86_64?). I am going to > have to guess none as none were mentioned, but using --enable-R-shlib > would be pertinent. > > On 31/08/2015 05:47, Davor Cubranic wrote: >> On FreeBSD 10.2, I get the following error when compiling R

Full_Name: Karsten Tabelow Version: R-2.3.1 OS: AIX5.3 Submission from: (NULL) (62.141.176.2) Specification in config.site: CC=xlc_r CFLAGS='-O -qstrict' F77=xlf_r FFLAGS='-O -qstrict' SHLIB_LDFLAGS='-G' DYLIB_LDFLAGS='-G' LDFLAGS='-brtl' CXX=xlc++_r CXXFLAGS='-O -qstrict' Complilation error in src/main/printutils.c: "printutils.c",

On 2015-11-23 23:43, peter dalgaard wrote: >> On 23 Nov 2015, at 22:30 , aixtools<aixtools at gmail.com> wrote: >> >>> ./configure --enable-maintainer-mode ... > Two things here > > - possibly irrelevant, but I'd avoid building in the source directory. (mkdir ../BUILD ; cd ../BUILD; ../R/configure) > > - don't turn on mantainer mode. You are not a

Hello, I compiled R-2.15.2 with linux intel compilers (see below). when I execute some R code on a // 4 proc x 4 cores // server (export MKL_NUM_THREADS = 16) very often I have the situations where only one processor (4 cores) is active instead of 4 (16 cores) ! do you know this fact depends on what ? thank you ! P.S. many functions of R are single-threaded, is there a simple way to make them

I tried compiling using GCC. First, I changed config.site to: ~/R-3.2.2$ svn diff config.site Index: config.site =================================================================== --- config.site (revision 69236) +++ config.site (working copy) @@ -278,3 +278,8 @@ ## Path to the version of pkg-config to be used for locating cairographics. ## PKGCONF = +F77=gfortran48 +FC=${F77} +CC=gcc48

Hello, I recently built a 64-bit R 2.10.1 on OpenSolaris using the Sun Studio 12.1 compilers. I would like to contribute the following notes, to update the OpenSolaris installation instructions. ================================================ 0. GNU libiconv and GNU gettext are assumed to be in /opt/lib. GNU libiconv is easy to build from source. After building it, configure