similar to: rle() fails with NA's (PR#892)

Hi All, A twitter user, Mike fc (@coolbutuseless) mentioned today that he was surprised that repeated NAs weren't treated as a run by the rle function. Now I know why they are not. NAs represent values which could be the same or different from eachother if they were known, so from a purely conceptual standpoint there is no way to tell whether they are the same and thus constitute a run or

Full_Name: Jeff Hallman Version: 2.0 OS: Linux Submission from: (NULL) (132.200.32.34) The function findGeneric() in the utils namespace contains this internal function: isUME <- function(e) { if (is.call(e) && (is.name(e[[1]]) || is.character(e[[1]]))) { switch(as.character(e[[1]]), UseMethod = as.character(e[[2]]), "{" =

Full_Name: Jeff Hallman Version: 2.3.1 OS: Windows Submission from: (NULL) (132.200.32.34) Internal(format.POSIXlt(as.POSIXlt(Sys.time()), "%Y%m%d%q", F)) Linux R-2.2.1 returns "20060613%q". Windows R-2.3.1 returns "20060613" dropping the "%q". The documentation says "Any character in the format string other that the '%' escape

Full_Name: Jeff Hallman Version: 1.2.2 OS: Solaris Submission from: (NULL) (132.200.32.33) "boink<-" <- function(x, a = 1, b = 2, value){ print(match.call()) x } > z <- 1 > boink(z, b = 4) <- 22 boink<-(x = *tmp*, a = 4, value = 22) > Shouldn't it have matched the 4 to b, not a?

One hassle I could do without is the necessity of writing C wrapper functions like this: void fameInit(int *status){ cfmini(status); return; } when I want to call a library function (cfmini, in this case) that takes an int argument. The .C interface only lets me pass a pointer to an int, rather than the int itself. Is there any chanch that .C could be enhanced to allow passing arguments by

Hello there R-help, I'm not sure if this should be posted here - so apologies if this is the case. I've found a problem while using rle and am proposing a solution to the issue. Description: I ran into a niggle with rle today when working with vectors with NA values (using R 2.31.0 on Windows 7 x64). It transpires that a run of NA values is not encoded in the same way as a run of other

I want to make a histogram from the lengths vector which is part of the output of rle. But I don't know how to access that vector so that I use it as an argument of hist(). What argument must I use so that I use the lengths vector as an input to hist()? Example output is: Run Length Encoding lengths: int [1:4] 1 2 3 3 values : num [1:4] -1 1 -1 1 A printout of the function rle() may

why? > rle Run Length Encoding lengths: int [1:1650061] 2 2 8 2 4 5 6 3 26 46 ... values : chr [1:1650061] "4bbf9e94cbceb70c BG bg" "4fbbf2c67e0fb867 SK sk" ... > as.data.frame(rle) Error in as.data.frame.default(vertices.rle) : cannot coerce class '"rle"' into a data.frame it seems that rle.df <-

I think need to do something like this: dat<-data.frame(state=sample(id=rep(1:5,each=200),1:3, 1000, replace=T,prob=c(0.7,0.05,0.25)),V1=runif(1,10,1000),V2=rnorm(1000)) rle.dat<-rle(dat$state) temp<-1 out<-data.frame(id=1:length(rle.dat$length)) for(i in 1:length(rle.dat$length)){ temp2<-temp+rle.dat$length[[i]] out$V1[i]<-mean(dat$V1[temp:temp2])

Hallo, I have an other problem, I have this vector signData with an alternation of 1 and -1 that corrispond to the duration of two different percepts. I extracted the durations like this: signData<- scan("dataTR10.txt") dur<-rle(signData)$length Now I would like to extract only the positive duration, e.g. signData <- c(1,1,1,1,-1,-1,-1,1,1,-1,-1) posduration <- c(4,2) I

Dear R Community - I hope you might be able to provide some guidance regarding the use of the rle function. I have a set of time-series data where a measured value is recorded every 30 seconds after the start of an experiment. Many of the measured values repeat and I am interested only in the values when there is a change. If I turn the measured values into a vector, the rle function works

Hi group, This is how my test file looks like: Chr start end sample1 sample2 chr2 9896633 9896683 0 0 chr2 9896639 9896690 0 0 chr2 14314039 14314098 0 -0.35 chr2 14404467 14404502 0 -0.35 chr2 14421718 14421777 -0.43 -0.35 chr2 16031710 16031769 -0.43 -0.35 chr2 16036178 16036237 -0.43 -0.35 chr2 16048665 16048724 -0.43 -0.35 chr2 37491676 37491735 0 0 chr2 37702947 37703009 0 0

I need arguments pro-S-PLUS and against SAS for a meeting I will have next week. S-Plus is (90 - 99)% compatible with R, so using S-Plus will make things much easier for everyone. But I can't use this argument. What other arguments could I use? Alberto Monteiro

I have a few functions, such as screenWidth() and screenHeight(), which I have been able to implement for a Unix/Linux environment, but not for Windows. (Does anyone know how to find the screen dimensions in Windows?) The Writing R Extensions manual tells me how to include platform-specific sections in documentation, and even how to have platform-specific help files. But it doesn't say

I am the maintainer of the 'tis' package. One of the functions in my package is 'nberShade'. A user wants to make nberShade generic, with the old version renamed as nberShade.default, all of which is fine with me. And he wants to add a new method, nberShade.ggplot, which works for objects of class ggplot. He also wants to add a method fortify.tis for the generic fortify defined

I have an S3 class called "tis" (Time Indexed Series) which may or may not have multiple columns. I have a function "[<-.tis" that I've reproduced below. My question is this: inside of "[<-.tis", how can I distinguish between calls of the form x[i] <- someValue and x[i,] <- someValue ? In either case, nargs() is 3, and looking at the values

I have an S3 class called "tis" (Time Indexed Series) which may or may not have multiple columns. I have a function "[<-.tis" that I've reproduced below. My question is this: inside of "[<-.tis", how can I distinguish between calls of the form x[i] <- someValue and x[i,] <- someValue ? In either case, nargs() is 3, and looking at the values

Dear all, I would like to task you if you know a rle version that can work also in a non consecutive way too. B.R Alex [[alternative HTML version deleted]]

Dear List, Suppose we have a variable K.JUN defined as (with 1=wet, 0=dry): K.JUN1984 = c(1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 0, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1) K.JUN1985 = c(0, 1, 0, 1, 0, 0, 1, 0, 0, 1, 0, 0, 1, 1, 1, 1, 1, 0, 0, 1, 1, 0, 0, 1, 1, 1, 1, 1, 1, 1) K.JUN1986 = c(0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 0, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1)

I'm writing a package that interfaces to the FAME database, via a library of compiled C routines accessible through a Linux .so file. My .onLoad() function loads the .so like this: dyn.load("/opt/fame/timeiq/lib/linux_x86/libjchli.so", local = F) and after that I also load my own fame.so via library.dynam("fame", package = "fame") The code in fame.so uses