similar to: R 1.2.0 : logspline does not install from install.packages(). Missing #include | library ? (PR#775)

Hi all, I've successfully compiled R-1.2 on a Linux box (Mandrake 7.1). However, when I installed packages from sources, I run into problems with the packages logspline and tseries. The error messages are as follows. Can anyone help? The compiler is gcc 2.95.3, if that helps. Andy ================================================ Installing source package `logspline' ... libs gcc

The following are now on CRAN: KernSmooth: version 2.2 of the code for Wand & Jones book on kernel smoothing. logspline: spline fits to log denisites, with automatic choice of smoothing. ppr: projection pursuit regression. rpart: recursive partitioning (CART-like) VR: Venables & Ripley libraries 5.3pl021 for 0.62.1 and in the devel section tree: a clone

The following are now on CRAN: KernSmooth: version 2.2 of the code for Wand & Jones book on kernel smoothing. logspline: spline fits to log denisites, with automatic choice of smoothing. ppr: projection pursuit regression. rpart: recursive partitioning (CART-like) VR: Venables & Ripley libraries 5.3pl021 for 0.62.1 and in the devel section tree: a clone

I am aware of the nice R package "logspline", which does smooth density estimation from interval-censored data (that is, values that are known to lie in a specified interval rather than known exactly). Function logspline.fit uses a maximum penalized likelihood method, with the penalty related to the number of knots used in a cubic regression-spline fit. I need to be able to do some

Dear List, I have a simple model as follows: x <- rnorm(500) library(logspline) fit <- logspline(x) n <- 1000000 y <- replicate(n, sum(rlogspline(rpois(1,10), fit))) # last line The problem I keep getting is R crashes when doing the last line. It seems to be fine if n is small, but not if n is 1000000. The message I keep getting is: "R for Windows GUI front-end has

Hi interested readers, I have a function that creates several functions within a loop and I would like them to be returned for further use as follows: Main.Function(df,...){ # df is a multivariate data funcList<-list(NULL) for (i in 1:ncol(df)){ temp<-logspline(df[,i],...) # logspline density estimate funcList[[i]]<-function(x){expression(temp,x)} } return(funcList) } I have tried

So after about 4 hours struggling with Try and TryCatch I am throwing in the towel. I have a more complicated function that used logspline through iterative distributions and at some point the logspline doesnt function correctly for some subsets but is fine with others so I need to be able to identify when the error occurs and stop curtailing the distribution and I think this Try or TryCatch

I using oldlogspline (from logspline package) to model data distributions, and having a problem. My data are search area sizes. They are based on circular search radii from random points to the nearest edge of the nearest grass tussock. Search area sizes are distributed from 0 (the random point intercepts a tussock) and upwards (as points are further from any tussocks). The density of all my

Hi everyone, Using R 2.10.1 on Windows Vista. DOWNLOADED PACKAGES DO NOT INSTALL. I expect to see them in C:\Program Files\R\R-2.10.1\library These files download (see below). And they are all in zip format. What am I doing wrong? Please help. All suggestions appreciated. trying URL 'http://cran.cnr.Berkeley.edu/bin/windows/contrib/2.10/RColorBrewer_1.0-2.zip' Content type

Hi All: Package TSERIES is stated to depend on MVA. However, there is no MVA package to be found under the list of package sources. Best wishes, ANDREW tseries: Package for time series analysis Package for time series analysis with emphasis on non-linear and non-stationary modelling Version: 0.7-6 Depends: ts, mva, quadprog Date: 2001-08-27 Author: Compiled by Adrian

Friends, I changed one line of a package at the source level and then rebuilt it. When I run R CMD check, I get an error: installing R.css in C:/polsplineRS.Rcheck ---------- Making package polsplineRS ------------ adding build stamp to DESCRIPTION making DLL ... making hareall.d from hareall.c making heftall.d from heftall.c making lsdall.d from lsdall.c making lspecall.d from lspecall.c

I'm implementing a new testing procedure proposed by Chen, Ying, Zhang and Zhao (Biometrika, 2008) that employs a reference distribution obtained by a resampling method. For the moment I'm using logspline to estimate the reference density and then computing the p-value using plogspline. I would be interested in hearing about other suggestions from anyone who has looked at similar

> Almost any method of fitting a density estimate would work on > integrating (numerically) the result. it is a nice idea concerning the monotony property, which will be obtained automatically, but I am going to use results of approximation analytically > In particular, look at package polspline, where > p(old)logspline does the integration for you. thank you, I am going to

Dear List I just downloaded and installed R 2.12.0 and then installed R Commander . First it got RCmdr and Car, and then suggested for other packages for utilizing the full functionality- I clicked yes! I got 140 packages installed!!! Cran Mirror was UCLA... Here is the list. Is this intentional- I can see some packages like snow and multicore which are desirable but quite optional.(see list

Something strange is happening with update.packages on my machine (Win2000, R-1.5.0 installed from binaries). Some of the packages (see below) keep getting updated every time. When I issue update.packages() I get this every time for the last few days (I think since I installed 1.5 and the packages but I am not sure). This happens with CRAN shown below and also with CRAN set to

I think qqline does not do exactly what it is advertised to do ("`qqline' adds a line to a normal quantile-quantile plot which passes through the first and third quartiles."). Consider the graph: tmp <- qnorm(ppoints(10)) qqnorm(tmp) qqline(tmp) The line (which I expected go through all the points), has a slightly shallower slope than does the points plotted by qqnorm. I think

There was mention of this [r-sig-fedora at r-project.org] mailing list on one of the other R lists overnight. I thought the list needed a bit of posting, as I could not recall seeing content recently on it. I cross post to the Red Hat hosted list as well, it raises issues relevant there as well I have been packaging in support of many of the financial packages at CRAN and in R-Forge [

Dear All, I'm running the latest R on WinXP by using Rgui.exe --max-mem-size=30000Mb . After read in a huge data file to a data matrix, I tried to get a subset of the data matrix but failed with: Error: cannot allocate vector of size 12079 Kb Any tips to get out of it? If helps, > memory.limit() [1] 3145728000 > memory.size() [1] 842735624 Thanks! Best, Cao

Hi folks, I know that density function will give a estimated density for a give dataset. Now from that I want to have a percentage estimation for a certain range. For examle: > y = density(c(-20,rep(0,98),20)) > plot(y, xlim=c(-4,4)) Now if I want to know the percentage of data lying in (-20,2). Basically it should be the area of the curve from -20 to 2. Anybody knows a simple

Up to now I have got the base R and about half of the packages working on SuSe Linux 5.3 using gcc, g77 and xdevel. The other half, for example: pspline, logspline, KernSmooth, akima, tripack, ppr, principal.curve, cluster, funfit, repeated, event, etc., just won't install. Some of them give warnings at expressions in subroutines (repeated, event, pspline,etc.. I will ask about this in