similar to: autogenerated namespaces not initialized correctly

Displaying 20 results from an estimated 10000 matches similar to: "autogenerated namespaces not initialized correctly"

2005 Aug 27
2
Writing R-extensions
G'day all, After reading through "Writing R Extensions", Version 2.1.1 (2005-06-20), I thought the the following points might need clarifications or corrections. (I checked that these comments also hold for "Writing R Extensions", Version 2.2.0.) 1) When I ran "package.skeleton" recently, I noticed that the DESCRIPTION file and an entry `type'. This
2004 Aug 04
1
installing package with version number using namespaces & dynamic library
Hi, I wonder whether a package with namespace & dynamic library can be installed with the version number attached, ie. with the argument --with-package-versions. Is this currently possible? Using R 1.9.1 on Debian 3.0 I encounter a problem when trying to load a package installed with R91 CMD INSTALL --with-package-versions -l /mnt/local/R/R-1.9.x-libs-EpiR RIO in R started with R91
2009 Jun 24
2
loadNamespace and useDynLib
I am considering a package with a namespace (Rgraphviz from Bioc). I essentially want to have some error handling for loading the dll, something like wrapping it into tryCatch or similar (reason: see below). Right now I am loading the dynamic libraries by useDynLib in my NAMESPACE file. When I look at the code from loadNamespace, I have the impression that what I want is impossible
2018 Jul 20
4
autogenerated self-signed certificate problem
Hi people, i have a problem with trying ldaps i use autogenerated self-signed certificate, i write in smb this: tls enabled = yes tls keyfile = tls/key.pem tls certfile = tls/cert.pem without cafile when i try to verify with: openssl verify /usr/local/samba/private/tls/myCert.pem it said me unable to verify the first certificate and if add -CApath works! and finally when i try from another
2011 Jun 23
1
Class not found when search in .onLoad
Hi, I am facing with a strange behaviour of isClass and extends when these are called in .onLoad in both R 2.12.1 and R 2.13.0. This is preventing my package from doing some object initializations at a proper place (i.e. in .onLoad). Suppose one defines two S4 classes in a package, and that one needs to check the inheritance between these two when loading the package (e.g. to validate slots
2010 Jan 26
1
library.dynam
hi, i'm having some trouble getting a package to load a shared library object in .onLoad(...) i have a shared object file, say "mylib.so". if i start an R session, and via the CLI specify the actual library via: > dyn.load("mylib.so") everything works quite well (i.e. i can then follow with some .Call (...) methods) now, i'd like to include this shared library in
2011 Jul 17
1
NAMESPACE
> Packages without explicit ?NAMESPACE? files will have a default one created at build or INSTALL time, > so all packages will have namespaces. A consequence of this is that ?.First.lib? functions need to be > renamed, usually as ?.onLoad? but sometimes as ?.onAttach?. Couldn't R simply regard .First.lib as the appropriate function to save many packages from being needlessly changed?
2004 Sep 19
1
Namespace problem
Now I try to add some C and Fortan code to my package, so the NAMESPACE file is useDynLib(eha) importFrom(survival, Surv) export(mlreg.fit, risksets) but I get ..... * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... WARNING Error in .try_quietly({ : Error in library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE) :
2006 Apr 13
1
Wishlist: 'quietly' argument for .onAttach() / .First.li b()
From: Prof Brian Ripley > > On Thu, 13 Apr 2006, Peter Ruckdeschel wrote: > > > Hi R-devels, > > > > in "Writing R extensions" as well as in the help > > to .onAttach(), you mention that one could > > use this function to issue a start-up message/banner > > for the package. > > > > My little wish for Easter: > > > > a
2010 Mar 22
1
Some more help on S4 mechanism
Hello to the list Some days ago, I placed a question on this maling-list and received an answer from Martin that I tried to follow. Unfortunately, I am still puzzled by the next step. I spent the whole Week-end in gathering information from the net. Some of them are almost contridtcory and I lack a good document to help me. So my first question would beL Is there a convenient document which
2006 Apr 13
4
Wishlist: 'quietly' argument for .onAttach() / .First.lib()
Hi R-devels, in "Writing R extensions" as well as in the help to .onAttach(), you mention that one could use this function to issue a start-up message/banner for the package. My little wish for Easter: a 'quietly'-type argument for .onAttach() / .First.lib() which is passed through by functions require() and library() respectively, and by means of which one could optionally
2007 May 05
4
autogenerated it (was ''Custom Matcher and NAME NOT GENERATED annoyance'')
> On 5/5/07, Luis Lavena <luislavena at gmail.com> wrote: > > describe "A User (in general)" do > > before(:each) do > > @user = User.new > > end > > > > it { @user.should have_many(:contest_public_votes) } > > it { @user.should have_many(:design_industry_user_interests) } > > it { @user.should
2013 Dec 12
2
Strategies for keeping autogenerated .Rd files out of a Git tree
Hi Quite a few R packages are now available on GitHub long before they appear on CRAN, installation is simple thanks to devtools::install_github(). However, it seems to be common practice to keep the .Rd files (and NAMESPACE and the Collate section in the DESCRIPTION) in the Git tree, and to manually update it, even if they are autogenerated from the R code by roxygen2. This requires extra
2004 Mar 16
2
Documentation on how to put classes and methods in packages with namespace?
Documentation on how to put classes and methods in packages with namespace? How should I define my classes and methods in "dynamicGraph"??? (That is - Can some one point me to the documentation on how to put classes and methods in packages with a namespace? ) Currently it is done by the code below. This gives problems, when a workspace with a "dynmaicGraph" is
2012 Apr 07
4
Display instruction text on package load
I'm currently working on a new package for R that interfaces with an API. Most of the package's functionality requires users to supply an access key that allows the package to work with the API. I want to display text immediately upon loading the package that instructs/reminds users to enter their access key before attempting to do anything (as the package won't really work without
2004 Jul 08
1
building packages with NAMESPACE
hi! I tried to build a very simple package with NAMESPACE file, such that datasets are loaded only dynamically. > a2 <- function(x=a1) x+4 > a1 <- 1:10 > package.skeleton("aaa", list=c("a1", "a2")) Then I modified the help files and added the file NAMESPACE with these 2 lines: useDynLib(aaa) export(a1, a2) Then "R CMD BUILD aaa" works
2009 May 27
1
"Error: package/namespace load failed"
I am writing my first R package, and I have been getting the following series of errors when I run R CMD check: * checking S3 generic/method consistency ... WARNING Error: package/namespace load failed for 'REEMtree' Call sequence: 2: stop(gettextf("package/namespace load failed for '%s'", libraryPkgName(package)), call. = FALSE, domain = NA) 1: library(package,
2011 Apr 20
3
useDynLib in older versions e.g. (2.10)
Hi, Has something changed regarding the useDynLib in the NAMESPACE file in packages? I've written a package that works in e.g. 2.12/2.13 but simply cannot find the dynamic library under windows. The version on CRAN is older than the one I'm talking about and depends on a newer version of R but I want to make the package available to people with older versions. >
2018 Jul 20
0
autogenerated self-signed certificate problem
You missing or : Smb.conf tls cafile = tls/ca.pem And/or ( showing the Debian steps ), the CA is missing in ca-certifcates.crt In : /etc/ldap/ldap.conf TLS_CACERT /etc/ssl/certs/ca-certificates.crt Steps todo. mkdir /usr/local/share/ca-certificates/personal-cert Put the root in that folder. Run : update-ca-certificates You need to install ca-certificates first. apt install
2011 Jul 22
1
Problem with creating default NAMESPACE on FreeBSD
After building and installing R-devel from 21/07/2011 on FreeBSD 9.0-CURRENT (amd64), starting R gives the following warning: [..snip..] Beim Start - Warnmeldung: package 'datasets' in options("defaultPackages") was not found This happens with all versions after 14/07/2011. I think it is related to NEWS Sat, 16 Jul 2011 CHANGES IN R-devel PACKAGE INSTALLATION Packages without