Displaying 20 results from an estimated 3000 matches similar to: "build 32-bit R on x86_64?"
2010 Sep 16
1
advice on writing/maintaining an R package with a version control system
Dear all,
As I resume my dissertation work next month, I'd like to actually
start an R package this time around. I haven't done so because I
update my code very often (still in development phase), so running the
skeleton function, running checks, building, and re-installing the
package onto the system seemed like a long and tedious process.
I would like to hear your experience on how
2010 Aug 20
1
Package repository on Linux machine and upgrading R
Dear list,
I remember running into a thread on this topic in one of the R mailing
lists before but I can't seem to find it now. Basically, I remember a
discussion on how one can set up where R packages can be installed so
that when we upgrade the R version on the machine, the packages are
still accessible. One can back up this package location as well and
bring it to a new computer. I
2010 May 18
1
proportion of treatment effect by a surrogate (fitting multivariate survival model)
Dear R-help,
I would like to compute the variance for the proportion of treatment
effect by a surrogate in a survival model (Lin, Fleming, and De
Gruttola 1997 in Statistics in Medicine). The paper mentioned that
the covariance matrix matches that of the covariance matrix estimator
for the marginal hazard modelling of multiple events data (Wei, Lin,
and Weissfeld 1989 JASA), and is implemented
2010 Sep 29
1
location of Rconfig.h when using architecture-dependent subdirs
Hello,
I just tried configuring R to use architecture-dependent subdirs
$ r_arch=x86_64 ./configure --prefix=/u/smat/konis/testdir
on a Debain Squeeze box
$ uname -a
Linux smapc007 2.6.32-5-686 #1 SMP Sat Sep 18 02:14:45 UTC 2010 i686
GNU/Linux
After building and installing, the Rconfig.h ended up in
.../lib/R/include/x86_64 but R.h still includes it as
#include <Rconfig.h>
2009 Sep 23
2
R + C + Lapack toy regression example
dear list,
since matrix manipulations is often of interest in statistical
computations, i'd like to get a working example of using Lapack for
regression. However, i run into an error.
My matrix-lapack-example.c file:
#include <R_ext/Lapack.h>
void reg(const char* trans, const int* m, const int* n,
const int* nrhs, double* a, const int* lda,
double* b, const int*
2015 Oct 09
2
R 3.2.2 64 bit compilation error on AIX
One other note: I'm also using the latest src/main/dcf.c that was
giving an issue on AIX previously; see
[this](https://stat.ethz.ch/pipermail/r-devel/2015-September/071781.html)
thread.
Thanks.
On Thu, Oct 8, 2015 at 6:51 PM, Vinh Nguyen <vinhdizzo at gmail.com> wrote:
> Please note that if I don't specify those variables, then R 32 bit
> compiles fine. Thanks.
>
> --
2015 Sep 21
2
segfault with readDCF on R 3.1.2 on AIX 6.1 when using install.packages
Here's an update:
I checked the ChangeLog for R, and it seems like readDCF was changed
in 3.0.2. I went on a whim and copied src/main/dcf.c from R 2.15.3
over to 3.2.2, and R compiled fine and install.packages now work for
me.
This is probably not ideal, but it at least makes R usable on AIX for
me. Would definitely like to help figure out what's wrong with the
new dcf.c on AIX.
2015 Oct 09
2
R 3.2.2 64 bit compilation error on AIX
Dear list,
I'm following the instructions provided here to compile R 64 bit on
AIX 6.1. I did
export OBJECT_MODE=64
export CC="gcc -maix64 -pthread"
export CXX="g++ -maix64 -pthread"
export FC="gfortran -maix64 -pthread"
export F77="gfortran -maix64 -pthread"
export CFLAGS="-O2 -g -mcpu=power6"
export FFLAGS="-O2 -g -mcpu=power6"
2015 Sep 21
5
segfault with readDCF on R 3.1.2 on AIX 6.1 when using install.packages
Hi,
Note that one significant change to read.dcf() that happened since R
3.0.2 is the addition of support for arbitrary long lines (commit
63281), which never worked:
dcf <- paste(c("aa: ", rep(letters, length.out=10000)), collapse="")
writeLines(dcf, "test.dcf")
nchar(read.dcf("test.dcf"))
# aa
# [1,] 8186
The culprit being line
2014 Nov 11
2
segfault with readDCF on R 3.1.2 on AIX 6.1 when using install.packages
Dear list (re-posting from r-help as r-devel is probably more appropriate),
I was able to successfully compile R on our AIX box at work using the
GNU compilers following the instructions on the R Administration
guide. The output can be seen at here
(https://gist.github.com/nguyenvinh/504321ea9c89d8919bef) and yields
no errors .
However, I get a segfault whenever I try to use the
2015 Oct 09
2
R 3.2.2 64 bit compilation error on AIX
>>>>> Vinh Nguyen <vinhdizzo at gmail.com>
>>>>> on Thu, 8 Oct 2015 20:21:32 -0700 writes:
> Ahh, sorry for not googling the error message. Found
> [this](http://r.789695.n4.nabble.com/Error-compiling-R-2-10-1-on-AIX-td1017862.html)
> post that suggests modifying /src/extra/tre/tre-internal.h
>
2009 Sep 03
1
building r packages for windows on a mac/linux
--- On Thu, 3/9/09, Vinh Nguyen <vinhdizzo at gmail.com> wrote:
> hi hin-tak,
>
> i'm trying to build r packages for windows on a
> mac/linux. i guess
> this used to possible and supported, but is no longer
> supported. i
> ran into this post of yours,
> https://stat.ethz.ch/pipermail/r-devel/2009-July/053971.html,
> and hope
> u don't mind me
2015 Sep 22
2
segfault with readDCF on R 3.1.2 on AIX 6.1 when using install.packages
On Mon, Sep 21, 2015 at 2:48 PM, Duncan Murdoch
<murdoch.duncan at gmail.com> wrote:
> On 21/09/2015 4:50 PM, Herv? Pag?s wrote:
>> Hi,
>>
>> Note that one significant change to read.dcf() that happened since R
>> 3.0.2 is the addition of support for arbitrary long lines (commit
>> 63281), which never worked:
>>
>> dcf <- paste(c("aa:
2015 Sep 22
1
segfault with readDCF on R 3.1.2 on AIX 6.1 when using install.packages
On Tue, Sep 22, 2015 at 1:46 AM, Duncan Murdoch
<murdoch.duncan at gmail.com> wrote:
> However, Herve's second example does illustrate a bug I can reproduce:
> one character out of 10000 was read incorrectly. Could you please try
> his final patch and see if it fixes your AIX problems?
Just tried the latest dcf.c from R-dev and install.packages no longer
segfaults from
2010 Oct 25
4
google voice + asterisk: calls made to GV# processed but weird
Dear all,
First off, I am very new to asterisk so forgive me if any of my
comments or questions seem trivial. Thanks to [this
post](http://blog.polybeacon.com/2010/10/17/asterisk-1-8-and-google-voice/)
and [this post](http://www.davidvossel.com/?p=28), I have GV set up on
asterisk through jabber.conf and gtalk.conf. I can successfully dial
out from asterisk.
I'm trying to set up an
2011 May 13
1
Embedding R's math expressions fonts for graphics generated by pdf() and postscript()
Dear list,
First, I am not writing to ask about embedding Computer Modern font in
graphics produced by R.
I am generating plots to be saved using pdf() and postscript() in R,
and I make use of some math expressions that are provided by R,
namely, some greek letters. My question is, do I need to embed the
fonts that include these math symbols (say, if they are going out for
publication, to have
2011 Aug 31
1
not able to install R version 2.13.1
I am trying to install R version 2.13.1 on Ubuntu. I get the following error
when I type the command sudo apt-get install r-base
I have modified /etc/apt/sources.list as well as run the command "sudo
apt-get update" prior to running this.
Please help!
Reading package lists... Done
Building dependency tree
Reading state information... Done
Some packages could not be installed. This
2015 May 06
2
IdntoAscii issue with KERNEL32.dll on 64-bit R on Windows Server 2003 x64 SP2
Dear list,
With the new R 3.2.0 on the aforementioned platform, I get the following
pop-up error when I enter "?update.packages" using R64:
"The procedure entry point IdnToAscii could not be located in the dynamic
link library KERNEL32.dll"
That is, my command never gets executed. This does NOT happen with R32.
I previously noticed this error starting with R 3.0.0 with the
2011 Sep 09
1
Saving Rcpp Objects for Future Use
Hello,
I have recently been doing some research regarding how to successfully save
and load Rcpp Objects ( objects from modules ) for future use, but with
little success. For example, to use the example package (from package
skeleton) in Rcpp:
>library(Rcpp)
>Rcpp.package.skeleton("rdevelhelp", module=TRUE)
...
> q()
// install rdevelhelp using R CMD INSTALL
// load new R
2010 May 18
2
survey package: weights used in svycoxph()
Dear R-help,
Let me know if I should email r-devel instead of this list. This
message is addressed to Professor Lumley or anyone familiar with the
survey package.
Does svycoxph() implement the method outlined in Binder 1992 as
referenced in the help file? That is, are weights incorporated in the
ratio term (numerator and denominator) of the estimating equation? I
don't believe so since