similar to: R-0.90.1 buglet in R shell (PR#375)

Hi everyone, Two minor points about ?.Renviron. 1) If R_ENVIRON is not set then R defaults to `${R_HOME}/etc/Renviron', not `${R_HOME}/etc/Renviron.site' as stated. 2) In the details, there is a missing "way" in "`value' is processed in a similar to a Unix shell." Cheers, Jonathan. --please do not edit the information below-- Version: platform =

Hi, I decided to upgrade to 1.8 today... :-) Anyway, we are writing our own package that is dependent on a bioconductor library - 'affy'. I've checked and when I fire up R, library(affy) behaves as expected... so it all seems to be installed and OK... In the DESCRIPTION file in my package source I have the line: Depends: affy When I run R CMD check simpleaffy I get to: ... *

Hello, Could someone please tell me why the following doesn't work: I have a file C:\Program Files\R\rw1051\etc\Renviron.site, which contains the line: R_LIBS= "C:/Jim/LocalR-Libraries/FromCran"; "C:/Jim/LocalR-Libraries/Cantata" >From the documentation, I gather that I have put this file in the default location, but to be safe I also explicitly set the R_ENVIRON

Colleagues, I am trying to understand how R (2.12.1) obtains the PATH environment variable in Windows (7 or Vista). Startup {base} directs one to: "R_ENVIRON" -- which equals "" in my systems R_HOME/etc/Renviron.site -- which does not exist Next, it directs to: R_HOME/etc/Rprofile.site -- which also does not exist (the expected behavior in a "factory-fresh"

I've rolled up R-1.6.1.tgz a short while ago. This is a minor upgrade, fixing an assortment of minor bugs, and one major one: 1.6.0 introduced a memory leak in deparsing, causing much trouble for people running simulations. You can get it from the developer site at http://cvs.r-project.org/pub/CRAN/src/base/R-1.6.1.tgz or wait for it to be mirrored at a CRAN site near you. Binaries for

I've rolled up R-1.6.1.tgz a short while ago. This is a minor upgrade, fixing an assortment of minor bugs, and one major one: 1.6.0 introduced a memory leak in deparsing, causing much trouble for people running simulations. You can get it from the developer site at http://cvs.r-project.org/pub/CRAN/src/base/R-1.6.1.tgz or wait for it to be mirrored at a CRAN site near you. Binaries for

I see Peter has just announced the release of 1.0.0, on time, even here in Australia, in accordance with a timetable privately announced about 6 months ago. At that time it seemed optimistic to put it mildly. I am not a member of the core team, but as an ordinary user of R with a more privileged inside view than most I'd like to offer my personal congratulations and thanks. This is the

On Debian/Ubuntu, system wide environment variables and options are set in respectively /etc/R/Renviron.site and /etc/R/Rprofile.site. These files are automatically created when r-base is installed, and do not get overwritten during an upgrade. On Fedora, there is no /etc/R directory. What is the recommended place to define system wide environment variables and options on a Fedora system?

When I install a new version of R (Windows XP) I have to: 1. copy my rw....\etc\Rprofile.site file to the new installation 2. copy the rw....\share\texmf files to the tex subfolder of the miktex root directory and then refresh the miktex name database (I have a batch file that does this for me which I run whenever I install a new version of R.) 3. setup the shortcut key using

We noticed this bug in more complex code, but this succinctly describes the phenomenon. If you do not re-initialize a each time in the following loop, the final value only is assigned to all places when the loop is complete. > a <- b <- list() > for(i in 1:5) { + a$alpha <- i + b[[i]] <- a + } > unlist(b) alpha alpha alpha alpha alpha 5 5 5 5 5 If a is

Peter, There is a clear and simple bug in glm() that I have noticed in 0.64.2 (Windows and Unix) but may have been present in earlier versions. The function starts as follows: > glm function (formula, family = gaussian, data = list(), weights = NULL, subset = NULL, na.action = na.fail, start = NULL, offset = NULL, control = glm.control(...), model = TRUE, method =

> -----Original Message----- > From: Cobalt [mailto:grosso at mail.ru] > Sent: Friday, 29 December 2000 7:23 > To: r-help at r-project.org > Subject: [R] anova > > > > ..Hello, Well Hello, whoever you are. (In this list anonymous messages are considered rather impolite. Next time please submit your message under your real name as a gesture of good faith. For this

--AZaLVt6Pw+ Content-Type: text/plain; charset=us-ascii Content-Description: message body text Content-Transfer-Encoding: 7bit Dear all, I was looking at "splinefun" and the underlying C code and believe that there is a memory access error in the C routine "spline_eval". Specifically, on line 368 and following the following code appears: if(ul < x[i] || x[i+1] < ul)

While termplot is under discussion, here's another proposal. I'd like to change the default for partial.resid to TRUE, and for smooth to panel.smooth. I'd be surprised if those changes were to break existing code. John Maindonald email: john.maindonald at anu.edu.au phone : +61 2 (6125)3473 fax : +61 2(6125)5549 Centre for Mathematics & Its Applications, Room

My apologies for he very short time before things close, but it's not my fault. If necessary get your hat in the ring by Friday and see to the niceties later, may I suggest. This is a vacancy in my group in Cleveland. The work is interesting and the challenges large. Bill Venables. ---------------------------------------------------------------------------- Division of Marine Research

Peter, I thought this one was noted and fixed, but I could be wrong. R : Copyright 1999, The R Development Core Team Version 0.63.3 (March 6, 1999) .... [Previously saved workspace restored] > tabulate(1:10, 5) Process R:1 segmentation fault at Sat Apr 3 17:48:34 1999 -- (The following contact details become official on 1 May 1999, but the email

Brian, Thanks for doing this. As the primary author, could I have a desk copy, please? Bill Venables. Bill Venables, CMIS, CSIRO Marine Laboratories, PO Box 120, Cleveland, Qld. 4163 AUSTRALIA Phone: +61 7 3826 7251 Fax: +61 7 3826 7304 Mobile: +61 419 634 642 <mailto: Bill.Venables at csiro.au> http://www.cmis.csiro.au/bill.venables/ -----Original Message----- From: Brian

I seem to have unwittingly stirred up a hornets' nest here, so let me have one more say and leave it. Firstly, congratulations to Renaud Launcelot, who seems to have a better feel for wryness and irony in English than some of my native speaker colleagues. Of course R A Fisher is a seminal writer, indeed close to the founder of modern statistics and every aspiring statistician should read

How can I access a function created in one data directory in another? I have been sourcing the text file that contains the function each time I go to another data dir. This is cumbersome, and I suspect there is a way to make functions global. Thanks in advance, S. David White Dept of Speech and Hearing Science Ohio State University Columbus, Ohio

Does anyone have, or has anyone ever considered making, a version of 'termplot' that allows the user to specify that all plots should have the same y-limits? This seems a natural thing to ask for, as the plots share a y-scale. If you don't have the same y-axes you can easily misread the comparative contributions of the different components. Notes: the current version of termplot