similar to: correlation between XY coordinates

Hi, from what I understand about the canonical correlation function 'cancor', it looks for correlations in two sets of variables, each represented in matrix form. Right? Sounds exactly like what I need. I have tried the following but I am not sure how to interpret the results. AudioPCs <- c(ArTHarF0PCA$x[,2], ArTHarF1PCA$x[,2], ArTHarF2PCA$x[,2], ArTHarF3PCA$x[,2],

Dear R's! I am strugling with cancor procedure in R. I cannot figure out the meaning of xcoef and of yxcoef. Are these: 1. standardized coefficients 2. structural coefficients 3. something else? I have tried to simulate canonical correlation analysis by checking the eigenstructure of the expression: Sigma_xx %*% Sigma_xy %*% Sigma_yy %*% t(Sigma_xy). The resulting eigenvalues were the same

I'm trying to write a formula method for canonical correlation analysis, that could be called similarly to lm() for a multivariate response: cancor(cbind(y1,y2,y3) ~ x1+x2+x3+x4, data=, ...) or perhaps more naturally, cancor(cbind(y1,y2,y3) ~ cbind(x1,x2,x3,x4), data=, ...) I've adapted the code from lm() to my case, but in this situation, it doesn't make sense to include an

kalish at psy.uwa.edu.au wrote: > > I'm a newbie at R, and can't get libraries to really work. > I did this: > > library(help = mva) > cancor Canonical Correlations > cmdscale Classical (Metric) Multidimensional Scaling > dist Distance Matrix Computation > hclust Hierarchical Clustering

Dear all, I didn't find any graphical solution in the package "mva" to plot the canonical scores from a CCA (canonical correlation analysis). Does anybody knows how to plot or has anybody already programmed : - the map of the canonical scores, - the graph of the canonical weights, - the correlation circle i.e. the canonical loadings ? Thank you for help ...

Hello, I'm a beginning user of R, now I have a question about canonical correlation analysis (cca). In R,there is a function "cancor.R" used for cca; For example X(n*p1) and Y(n*p2)are the two matrix to be analyzed. In the example given by R, when n> max(p1,n2), cancor(X,Y) works; but when n<p1 or n<p2, cancor(X,Y) doesn't work well because cancor$cor == 1; how to cope

Hello all, I apologize for a terribly simple question. I'm used to using Stata and am trying to `switch' over to R. I would like to recode a vector in a data frame when the value of it meets the following condition: if (dataframe$factor=='3'){dataframe$thevector<-(an arithmetic mean). What I would like to result is the creation of a new variable within the data frame for

When I use the function cancor of mva package, I found that it doesn't work when one of the matrix has only one column, or both have only one column. The function in Splus 5 with the same name works under those situations. The version of R I am using is 0.63.2 (released on Jan., 1999) on Solaris. Kenny Ye Assistant Professor Department of Applied Math and Statistics SUNY at Stony Brook

Hi everyone, Can I suggest an additional output component in cancor, from package mva? It would be useful to have the number of canonical correlation vectors, equivalently the rank of the covariance between x and y (label "rank"). This would usually be min(dx, dy), where dx and dy have already been computed for the svd function, but there might be situations where it was less than

Hi, Does anybody know some package or function that computes canonical variates? Luis & Janete -------------------------------------------- sapo.pt/kitadsl -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the

Having searched and searched I still haven't found what's the problem with my data (I've attached the relevant file). Every time I tried to use the CANCOR-Function I got error messages. So I turned to check my two sets of variables separately by using the "colMeans"-Function. With one set no problem .. but with the other. My input : > struktur <-

I believe this posting is placed, and I take the liberty to re-direct to the r-help mailing list. Regards, Ronggui On 26 April 2011 12:33, <gopala at mail.gvsu.edu> wrote: > ?I am trying to create a web user interface using RApache. I need to install rJava packge but I am getting the following error message > > RApache Warning/Error!!! > > Error : .onLoad failed in

Hello all, Is there an r function that exists that will perform repeated measures MANOVAs? For example, let's say I have 3 DVs, one between-subjects IV, and one within-subjects IV. Based on the documentation for the manova command, a function like that below is not appropriate because it cannot take Error arguments. manova(cbind(DV1,DV2,DV3) ~ BetweenSubjectsIV * WithinSubjectsIV +

Colleagues, I'm developing a library of functions for community ecology analyses and have a couple of questions that I've not been able to answer via faqs or docs. 1) Are there existing functions for: a) Bray-Curtis (polar) ordination? b) non-metric multidimensional scaling (NMDS)? c) canonical correlation analyses (CCA and DCA)? d) TWINSPAN (doubtful...)? 2) If not,

Hi, I wanted to know how to compute the correlation ratio (eta) between two variables using R. Is there any function to compute the correlation ratio. Any help will be very much appreciated. Thanks, Suman [[alternative HTML version deleted]]

Peter, As I understand your Q. You probably have data that is similar to each other like stock Prices for all RHS variable. In that case the difference between corr and cov is not significant; however, if your RHS contains totally dissimilar variables it matters a great deal. If x1 income, x2 job type, x3 Education level, etc..., then taking cov of these variables would not be desireable

Suppose I have two sets of (x,y) points like this: x1<-runif(n=10) y1<-runif(n=10) A<-cbind(x1,y1) x2<-runif(n=10) y2<-runif(n=10) B<-cbind(x2,y2) I would like to measure how similar the two sets of points are. Something like a correlation coefficient, where 0 means the two patterns are unrelated, and 1 means they are identical. And in addition I'd like to be able to

Hi, I just got a new computer with windows vista on it and I am having a problem using Tinn R. The problem occurs when I select a chunk of code and try to run it all at once using the "R send:selection (echo = TRUE)" button, I get this error: Error in source(.trPaths[5], echo = TRUE, max.deparse.length = 150) : object ".trPaths" not found Any suggestions how to fix this??

Hi, I want to merge 4 data frames with one column in common but I am getting error message while using this function. Can any one help me out. > merge_all(Br,Ki,Lu,Pr,by="Genes") Error: could not find function "merge_all" I have installed the package: reshape but I still get this error -- View this message in context:

Hi, I am trying to receive a fax with the spandsp library. The sending fax says "success" but there is no tiff file generated. I use "exten => 7000,1,rxfax(/tmp/testfax.tif)" in my extensions.conf. The connection is via SIP/G.711 as I have read on the list that this can sometimes work (I know Fax over IP is troublesome without T.38). I think the transmission should not