similar to: Cummerbund differential expression data analysis package issue

Hi R people! I have a directory of .csv files I would like to make into objects then scatter plots. I have been having varying degrees of progress. I was able make an object of all files, loop through it, and make a pdf of the last file I looped through. I kept renaming the pdf so instead of ending up with 27 pdfs I got one, with the data from the last file I have been tweaking with it

Hello R users, I have successfully created a square (or more generally, rectangular) tophat smoothing routine based on altering the already available KDE2D. I would be keen to implement a circular tophat routine also, however this appears to be much more difficult to write efficiently (I have a routine, but it's very slow). I tried to create one based on using crossdist to create a distance

A most puzzling network conundrum has arisen while I was attempting to create a virtual network behind a virtual router which in turn connects the virtual network to my real network. My machine (192.168.103.23) is on the network with my router (192.168.103.1). The virtual router, tiara, has to connect my 192.168.103.* network with the virtual 10.0.0.* network which comprises two other virtual

There is a memory leak in newhidups. After 23 days uptime it used 138M memory. Apart from the memory leak, the system works ok. Is there anything I can do to help fix this problem? Tor. [root@tophat init.d]# ps -unut v PID TTY STAT TIME MAJFL TRS DRS RSS %MEM COMMAND 21122 ? Ss 1:35 0 69 137934 136800 27.0 /sbin/newhidups auto 21125 ? Ss 0:37 0

Hi All I am wondering if people based on their experience could share what methods one could use to compare two gff/gtf files. The reason why I want to do so is that we have constructed a RNA-Seq based transcriptome and would like to compare it with reference transcriptome we had from in-silico approaches. Ideally we are looking to find out 1. new genes we see 2. transcripts where the

Good day, I am having trouble getting dovecot to authenticate using postgresql. For some reason, it fails on a PAM error, although I have specified pgsql as authentication? Here my setups: dovecot.conf: -- snip-- (not sure if you need teh rest) auth = digest_md5 auth_mechanisms = plain digest-md5 auth_userdb = pgsql /etc/dovecot-pgsql.conf auth_passdb = pgsql /etc/dovecot-pgsql.conf auth_user