similar to: Creating a point pattern with spatstat

Dear Community I am at my wits end and seek advice. My wish is to plot coordinates (x,y in WGS84_UMTS for the ones interested) of sampling points. This I can do by the standard spatstat prodcedure via owin. I then try to add an image, which is a map/satellite photo in the background. Firstly Problem: With the current code, I can not get the edges of the image to match the boarders of the plot

I am a new user of the R spatstat package and am having problems creating a polygonal observation window with owin(). Code follows: library("maps") library ("sp")` library("spatstat") mass.map <- map("state", "massachusetts:main", fill=T) # This returns a data frame includding x and y components that form a polygon of massachusetts mainland`

I would like to use the output from the map function in the package maps for use in, say, the spatstat package. I don't quite understand the coordinates for the border of the state: Example: library(maps) iowa<-map("region","iowa) x<-iowa$x y<-iowa$y There are NA's and duplicated coordinates. What would I need to do to use this in the spatstat owin command?

Dear all, I am currently working with the spatstat package, using windows and pixel images. First: My aim is to transform a shapefile (see attached) into a pixel image. My idea is to start transforming the shapefile into a Spatial Polygon file: x <- readShapeSpatial("200001441.shp") y <- as(x, "SpatialPolygons") z <- as.owin(y) Given z, I want to identify each

Dear users, I am trying to export polygons from Arcmap into Spatstat to run some simulations using functions available in Spatstat package. One particular area to be exported is formed by a number of polygons defining the external boundaries of the area (as a groups of islands) and a number of polygons inside the previous ones, as ?holes? not to be considered as part of the area. I have

On 02/06/17 01:17, Lluis.Hurtado at uv.es wrote: > Dear all, > > I am currently working with the spatstat package, using windows and pixel images. > > First: > > My aim is to transform a shapefile (see attached) into a pixel image. > > My idea is to start transforming the shapefile into a Spatial Polygon file: > > x <-

Good day Im working with some coordinates, and want to create a PPP object, I found that error: > Datos=read.table("puntos_texto.txt",dec=".",sep="\t",header=T) > summary(Datos) id y x Min. : 1.0 Min. :1013581 Min. :1177842 1st Qu.: 821.2 1st Qu.:1014442 1st Qu.:1179658 Median

Hello, I have fitted a Log-Gaussian Cox Process on my data but when I try to use "simulate.kppm" of the spatstat package I get this error: Error in rLGCP(model = model, mu = mu, param = param, ..., win = win) : The spatial domain of the pixel image ?mu? does not cover the simulation window ?win? I've used covariates as im, changed the npixel value of the spatstat options to

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Hi all, I am using quadratcount in spatstat to divide a window containing a point pattern into a grid of quadrats containing the intensity of points in each quadrat. My data is in UTM co-ordinates. My window is defined as follows: >p15<-ppp(x,y,window=owin(c(341710,342100),c(3126465,3126780)),marks=NUL L, checks=TRUE) Giving me a distance of 390m in the 'x' direction and 315m in

Dear R users, I am using spatstat to analyze point patterns (tree locations). I would like to import the shapefile with the study area polygons (six total) into R and use it to create the window for the spatstat analysis. I do not simply want to use a rectangle because the study areas spread out over 40000 ha. Any suggestions would be greatly appreciated. Thanks, Charlotte Reemts Charlotte

Hello everybody-- I have been playing with my data in spatstat, and what I'd like to present is a basic exploratory spatial analysis. I have used the following code, using a ppp.object called tsdspoints. The code develops the simulations and the envelopes I want, but I don't understand my first plot here, the [tsds.ghat.short$r, tsds.ghat.short$raw]...I cobbled together this code

Dear R list, I'm trying to create an object of class "owin" (observation window) in the package spatstat from GIS mapping data. Here's an example of my problem. Everything goes well until the last line of code. I get the error message shown at the bottom: library(spatstat) library(sp) library(maptools) con <- url("http://gadm.org/data/rda/CHE_adm1.RData") class(con)

Dear all, I am currently working with the spatstat package, using windows and pixel images. First: My aim is to transform a shapefile (see attached) into a pixel image. My idea is to start transforming the shapefile into a Spatial Polygon file: x <- readShapeSpatial("200001441.shp") y <- as(x, "SpatialPolygons") z <- as.owin(y) Given z, I want to identify each

Dear R users, I wish to run spatial point pattern analysis (e.g. pair correlation function, mark correlation function) for which I need to create an observation window (window=owin) from which the spatial analysis is generated. The command I used to create this observation window as follows: X1<- ppp(x, y, window=owin(c(80.58,144.96),c(101.06,165.13)),

My sincerest apologies, as this is a very elementary problem, but I have searched through archives and FAQs and on the web, and I am at the end of my own resources. I need to do analysis of a spatial point process occuring with four counties, using spatstat. I've had no trouble importing the shapefiles, but I can't seem to figure out what I need to do in order to use the boundary as an

Full_Name: Georg Roth Version: R.2.0.1.for Windows OS: Win98 Submission from: (NULL) (134.95.43.165) Using libraries "spatstat" and "sm" on R.2.0.1. under Windows 98 bug 1) the libraries "spatstat" and "sm" are not properly identified by the "library()" command on R.2.0.1. (R for Windows98). the libraryname is shown in upper case

Hi all, I am trying to install Spatstat on OpenSUSE 11.1. install.packages("spatstat", dependencies = TRUE) fails on the basis of various compiler packages (full message below). I have gcc version 4.3.2, which should include gfortran and g++ - so I'm not sure what to do! Richard * Installing *source* package ?deldir? ... ** libs gfortran

Hi, I tried to install spatstat using: install.packages("spatstat", dependencies = TRUE, lib = "./R/i486-pc-linux-gnu-library/2.8") but got the following msg: --- Please select a CRAN mirror for use in this session --- <here i selected one mirror, and tried several mirrors) Loading Tcl/Tk interface ... done Warning message: In install.packages("spatstat",

Today I installed the newest R develepment branch R version 2.14.0 Under development (unstable) (2011-03-18 r54866) on FreeBSD 9.0-CURRENT (amd64). All seems fine so far. After that I updated my R packages with option 'checkBuilt=TRUE'. There are four packages (spatstat, pscl, adehabitatLT, adehabitatHR) which gives an error like this: Error in dyn.load(file, DLLpath = DLLpath, ...) :