similar to: Saving multiple plots using tiff function

Hi all, I am trying to make tiff files of lattice plots at a resolution greater than 300 dpi required by a journal (PLoS ONE). I have tried both the tiff and bitmap functions. tiff keeps panel colors but reduces axes and tick labels so they are nearly invisible. bitmap maintains correct label size but only produces greyscale. Regular plots work fine with tiff; the problem is only with lattice

Dear Friends, I have been trying to save multiple 3x3 (mfrow=c(3,3) graphics inside a loop using tiff figure format (not using PDF or savePlot functions) with no success. Could you please help? Here is a simplified example code: dat=data.frame (ID=rep(1:10,each=10),IDV=rep(seq(1:10),times=10)) dat$DV <- with(dat, 50+15*IDV) dat=dat[order(dat$ID,dat$IDV),] for(i in 1:10){ dt1 =

I saw in the archive a post from Mark Wilkinson (Feb 1, 2003), saying that some of his R-generated png plots came out overlapping. I am seeing the same thing (with R 1.6.2 on Linux i686). My input file generated 4 plot files. The first two were fine, but the last 2 featured a weird overlay of the remaining graphs. The problem is not seen with postscript of pdf output. -- Allin Cottrell

I am creating graphs for a publication and would like them to have the same font size... but when I create a figure with multiple plots, the font size decreases even though I haven't changed the tiff() resolution or pointsize specifications, I have increased the figure size according to how many plots it will ultimately have, and I have made sure the margins are equivalent for single and

I love the new tiff(), jpeg(), and png() in R 2.7.0 but found an issue that I didn't see reported. When specifying 'units = "in"' but forgetting to change the default height and width (so the figure is unintentionally going to be 480 inches by 480 inches) I run into problems. Here's the reproducible example: tiff("a.tiff", units = "in", res = 1200,

Hi, Is there a way to specify a vector of colors for the tick annotation in a call to axis(), to achieve the x-axis here? <<Rplot003.png>> Thanks, Mark Wilkinson Informatics Analyst St. Jude Children's Research Hospital Department of Pharmaceutical Sciences The opinions expressed here are my own and do not necessarily represent those of St. Jude Children's Research

Hi all, I have created forest plots using the package "meta" that I submitted as pdf for publication. I just received an email from the editor asking me if I could send these files in an Excel or MS Word format such that they can treat them as tables with box plots. I am not sure if I can do this... Is this possible? I've tried the capture.output command, but I get a blank MS Word

Dear All, I am creating 4 plots (files) but I could see only 3. Here is a simple code d=data.frame(age=rnorm(100,40,8),ht=rnorm(100,170,15)) tiff(file=paste("test","%03d",".tif",sep="")) hist.data.frame(d) datadensity(d) par(mfrow=c(1,2),mar=c(3,3,3,3)) boxplot(d$age) hist(age) dev.off() PDF works fine but png and tiff seems to miss the second

# lda.r > # > # Author: Amsha Nahid, Jairus Bowne, Gerard Murray > # Purpose: Perform Linear Discriminant Analysis (LDA) > # > # Input: Data matrix as specified in Data-matrix-format.pdf > # Output: LDA plot > # > # Notes: Missing values (if any) are replaced by the half of the lowest > # value in the entire data matrix. >

hello, i already include the error in blue color word. i hope it can help you to understand my question. if not burden you, please give me a guide how to correct the error or maybe you can correct the coding cause error. thank you. > # lda.r > # > # Author: Amsha Nahid, Jairus Bowne, Gerard Murray > # Purpose: Perform Linear Discriminant Analysis (LDA) > # > #

Hello, I want to reduce the distance between my ticks and their labels. I managed to do it for the x-axis, but the y-axis puzzles me. Here's an example where there is no space between the x-asix ticks and labels. par(las=1) plot(runif(50), type="l",xaxt="n",yaxt="n",ylab="", bty="l") axis(2) axis(1,padj=-1.5) #However, axis(2,padj=-1.5)

HELLO, anybody... could you help me to check the below coding for volcano. what is the mistake? what the plot could not display? # volcano_plot.r # # Author: Amsha Nahid, Jairus Bowne, Gerard Murray # Purpose: Produces a volcano plot # # Input: Data matrix as specified in Data-matrix-format.pdf # Output: Plots log2(fold change) vs log10(t-test P-value) # #

Hi all, Quick question: What function can I use to draw a line in the margin of a plot? segments() and lines() both stop at the margin. In case the answer depends on exactly what I'm trying to do, see below. I'm using R v. 2.8.1 on Windows XP. Cheers, Alan I'm trying to make a horizontal barplot with a column of numbers on the right side. I'd like to put a line between the

On Mon, Oct 13, 2008 at 6:40 AM, Ivo Emanuel Gon?alves <justivo at gmail.com> wrote: > A good proposal, except for the fact most album art is JPEG. Not > forgetting either that, semantically, it's pretty bizarre to have > album art in a text format. I *desperately* want to provide the cover art for my own album in PDF format. Presently I provide JPG in the MP3s; at 72 DPI it

Hello. My name is Akashah. i work at metabolic laboratory. From my study, i found that volcano plot can help a lot in my section.  i already studied about the volcano plot and get the coding to run in R software, unfortunately, there is may be something wrong with the coding. This is because  no graph appear, but no error (blue color text) was shown on the R console. Below is the coding for

Hi, In the code below, the labels I put on the x-axis are too high (they cross the axis). Can anyone tell me how to move them down? I've tried adj=, padj=, mar=, and various other things, but cannot move them down. Thanks. -Ben labs <- paste('sample', 1:10) plot(1:10, xaxt='n', xlab='') axis(1, at=1:10, labels=labs, padj=1, las=2) # las is a par() parameter

I'm running asterisk CVS HEAD from 20040601 with spandsp 0.0.1k and libtiff 3.6.0 (no other copies are installed). I've put the audio files up at http://www.mixdown.ca/~andrew/dump/akohlsmith-faxsegfault.tgz -- the machine I am faxing from is a Canon IR3300 printer/copier/fax, but I get similar crashes from $29.95 fax machines too. :-) I'm trying to get a decent backtrace but

Appologies if this has been addressed before, but I can't seem to find it in the help archives. I'm looking to do something like the following but it looks like save.plot is deprecated. save.plot(plot(glm1$residuals,gain,main = "Hist of residuals and gain"),file="Desktop/hist1.png") Thanks in advance, Sean Session Info: R version 2.9.1 (2009-06-26)

Hello all, a friend has a problem with tiff() which I was unable to help about. I searched the error messages to no avail. When he tries: tiff(filename = "FedeWhyDoesntThisBloodyWork.tif", width = 5, height = 5, units = "cm", bg = "white", res = 1200) Error in tiff(filename = "FedeWhyDoesntThisBloodyWork.tif", width = 5, : unable to start device

> # >> # Generate the figures (on screen) >> # >> # Image generation - function definition >> pic_onscr<-function(matrix, title, cex_val=1) > + {x11() + par(mgp=c(5,2,0), # axis margins + # (title, > labels, line) + mar=c(7,4,4,2), # plot margins (b,l,t,r) + > las=1) # horizontal labels + plot(matrix, # data to plot + >