Displaying 20 results from an estimated 80 matches similar to: "R Parallel question"
2012 Jun 28
1
undefined S4 class in parallel computing at snowfall
Dear All,
I have a question of how to export S4 class specification to
clusters/workers in parallel computing. The package I used is snowfall. The
problem is reproducible as follows. Any hint is greatly appreciated.
Edwin Sun
=== begin ===========
library(snowfall)
sfInit(parallel = TRUE, cpus = 2)
setClass("catt", representation(aa = "numeric"))
setClass("dogg",
2011 Dec 20
1
Convert ragged list to structured matrix efficiently
Hi All,
I'm wanting to convert a ragged list of values into a structured matrix for
further analysis later on, i have a solution to this problem (below) but
i'm dealing with datasets upto 1GB in size, (i have 24GB of memory so can
load it) but it takes a LONG time to run the code on a large dataset. I
was wondering if anyone had any tips or tricks that may make this run
faster?
Below is
2011 Dec 23
2
missing value where TRUE/FALSE needed
Merry Xmas to all,
I am writing a function and curiously this runs sometimes on one data set
and fails on another and i cannot figure out why.
Any help much appreciated.
If i run the code below with
data <- iris[ ,1:4]
The code runs fine, but if i run on a large dataset i get the following
error (showing data structures as matrix is large)
> str(cluster.data)
num [1:9985, 1:811] 0 0 0 0
2012 Feb 22
1
Huge difference btw system time and elapsed time
Hi all,
I got this time for my code,
> proc.time()-pt
user system elapsed
132541.743 0.004 132533.526
As you can see, there is huge difference btw elapsed time and system time.
Does that mean lots of I/O? Or some bad coding?
Thanks,
Libo
[[alternative HTML version deleted]]
2010 Dec 10
2
Could concurrent R sessions mix up variables?
Hi, I'm working in R 2.11.1 x64 on Windows x86_64-pc-mingw32.
I'm experiencing a strange problem in R that I'm not even sure how to
begin to fix.
I've got a huge (forty-pages printed) simulation written in R that I'd
like to run multiple times. When I open up R and run it on its own,
it works fine. At the beginning of the program, there's a variable X
that I set to 1,
2006 Apr 25
5
FXListBox ...connect(SEL_COMMAND)
Hi,
I think I got a problem with the FXListBox widget. ( ruby 1.8.4 (2005-12-24) [i386-mswin32]) )
FXListBox.new(parent, nil, 0) do |libo4|
libo4.appendItem("0 very weird")
libo4.appendItem("1 very weird")
libo4.appendItem("2 very weird")
libo4.appendItem("3 very weird")
libo4.appendItem("4 very
2011 Aug 13
3
kernel 3.0 and dom0 native
Hello everybody,
I dont found the new feature about kernel 3.0 and Xen DOM0. Where
Kernel 3.0 has native support in dom0? how would I enable this option.
In my currently kernel (gentoo source 3.0 and vanilla kernel 3.0)
don''t found Xen device drivers, need i enable anything?
thanks!
--
-------------------
Pablo J. Villarruel / pablo@libo.com.ar
2010 May 23
3
"order" issue
Hi everybody, this is a real dummy thing.
I sorted a matrix based on a given column, and what I get is right, until it comes to columns of negative and positive values; than, "order" orders everything from max to min in the negative values, and then AGAIN from max to min in the positive values!!!
Why isn't everything order from max to min, and that's it?
Thank you!!!
Attached
2012 Nov 25
2
RExcel, ROOo and LibreOffice inquiry
Dear all
I'd like to give RExcel a decent spin, mainly to take advantage of
Excel's data management facilities and automatic recalculations.
However I cannot use this Windows-only solution on the platform of my
choice, Linux.
Alternatively I've been considering the cross-platform ROOo, the
OpenOffice equivalent of RExcel, but in this case the problem is that
the only release available
2008 Dec 03
2
Problem getting rid of app in wine installer software list
Chrono here, first I like to say I like your Software and I will do anything to help out on reporting bugs with extreme prejudice, now on with my first bug issue:
Computer: Dell XPS M1730
RAM: 4GB
Video: Nividia 8700 SLI
CPU: Hitachi 32 bit
OS: Dual Boot - Ubuntu 8.10 / Windows Vista Ultimate
I was trying Skype 3.8 on ubuntu 8.10 and the install was garbage...doesn't even work and I am
2015 Apr 04
1
Downloading a great number of files from different rsync servers for good loadbalancing and high efficiency.
Hi all,
I'm using Debian, I want to make a local repository which can let me
install packages more conveniently.
Considering that the rsync tool is the Debian official proposed tool for
syncing the files among its different rsync server sites, I use the rsync
client to downloading the deb packages from the different rsync servers
distributed around the world-wide for good loadbalancing and
2010 Feb 27
1
Cannot migrate DB due to "getaddrinfo: Name or service not known"
I am using Rails 2.2.2 and try to do a DB migration, but got the
following error. I am using Centos 5.4. Can someone give me a clue?
>> rake db:migrate RAILS_ENV="production"
rake aborted!
getaddrinfo: Name or service not known
(See full trace by running task with --trace)
[current]$ rake db:migrate RAILS_ENV="production" --trace
** Invoke db:migrate (first_time)
**
2010 Dec 11
0
is there a packge or code to generate markov chains in R
Hi,
if i have data in the following time series format:
time, amount, state
1 2222 A
1 333 B
2 45 A
2 77 B
where states could be n and time periods t is there a package in R that would calculate the transition probabilities in a markov chain.
for each t except t=0 to generate
A B
A
B
perhaps the best structure might
2013 May 05
0
[linux-linus test] 17901: regressions - FAIL
flight 17901 linux-linus real [real]
http://www.chiark.greenend.org.uk/~xensrcts/logs/17901/
Regressions :-(
Tests which did not succeed and are blocking,
including tests which could not be run:
test-amd64-i386-qemuu-rhel6hvm-intel 4 xen-install fail REGR. vs. 12557
test-amd64-i386-pv 4 xen-install fail REGR. vs. 12557
test-amd64-amd64-pv 4
2013 May 07
0
[linux-linus test] 17916: regressions - FAIL
flight 17916 linux-linus real [real]
http://www.chiark.greenend.org.uk/~xensrcts/logs/17916/
Regressions :-(
Tests which did not succeed and are blocking,
including tests which could not be run:
test-amd64-amd64-pv 4 xen-install fail REGR. vs. 12557
test-amd64-amd64-xl 4 xen-install fail REGR. vs. 12557
test-amd64-amd64-xl-win7-amd64 4
2013 Jun 16
0
[linux-linus test] 18150: regressions - FAIL
flight 18150 linux-linus real [real]
http://www.chiark.greenend.org.uk/~xensrcts/logs/18150/
Regressions :-(
Tests which did not succeed and are blocking,
including tests which could not be run:
test-amd64-i386-rhel6hvm-amd 7 redhat-install fail REGR. vs. 12557
test-amd64-i386-pair 17 guest-migrate/src_host/dst_host fail REGR. vs. 12557
Regressions which are regarded as
2013 Jun 23
0
[linux-linus test] 18181: regressions - trouble: broken/fail/pass
flight 18181 linux-linus real [real]
http://www.chiark.greenend.org.uk/~xensrcts/logs/18181/
Regressions :-(
Tests which did not succeed and are blocking,
including tests which could not be run:
test-amd64-i386-rhel6hvm-amd 7 redhat-install fail REGR. vs. 12557
test-amd64-i386-pair 17 guest-migrate/src_host/dst_host fail REGR. vs. 12557
Regressions which are regarded as
2013 Aug 29
0
[linux-linus test] 18805: regressions - FAIL
flight 18805 linux-linus real [real]
http://www.chiark.greenend.org.uk/~xensrcts/logs/18805/
Regressions :-(
Tests which did not succeed and are blocking,
including tests which could not be run:
test-amd64-i386-rhel6hvm-amd 7 redhat-install fail REGR. vs. 12557
test-amd64-i386-pair 17 guest-migrate/src_host/dst_host fail REGR. vs. 12557
Regressions which are regarded as
2013 Aug 29
0
[linux-linus test] 18844: regressions - FAIL
flight 18844 linux-linus real [real]
http://www.chiark.greenend.org.uk/~xensrcts/logs/18844/
Regressions :-(
Tests which did not succeed and are blocking,
including tests which could not be run:
build-i386 4 xen-build fail REGR. vs. 12557
Tests which did not succeed, but are not blocking:
test-amd64-amd64-xl-pcipt-intel 9 guest-start fail
2012 Dec 06
0
Package party Error in model.matrix.default(as.formula(f), data = blocks) :allocMatrix: too many elements specified
Dear all:
I¡¯m trying to get unbiased feature importance of my data via package ¡°party¡±, which contains 1-5 integer value, and a few numeric values attributes. The class label is 1-5 integer value as well. In total I have 20 features with 1100 observations. I checked the type my data in R using class(my_data_cell), no factor has been observed. I received a commond error like others did