similar to: Apply pmax to dataframe with different args based on dataframe factor

Dear list I'm testing a predictor and I produced nice performance plots with ROCR package utilizing the 3 standard command pred <- prediction(predictions, labels) perf <- performance(pred, measure = "tpr", x.measure = "fpr") plot(perf, col=rainbow(10)) The pred object and the perfo object are S4 with the following slots An object of class "performance"

Hello everyone,           I have a basic question regarding logical operators. > x<-seq(-1,1,by=0.02) > x   [1] -1.00 -0.98 -0.96 -0.94 -0.92 -0.90 -0.88 -0.86 -0.84 -0.82 -0.80 -0.78  [13] -0.76 -0.74 -0.72 -0.70 -0.68 -0.66 -0.64 -0.62 -0.60 -0.58 -0.56 -0.54  [25] -0.52 -0.50 -0.48 -0.46 -0.44 -0.42 -0.40 -0.38 -0.36 -0.34 -0.32 -0.30  [37] -0.28 -0.26 -0.24 -0.22 -0.20 -0.18 -0.16

Hello there, I don't know if I'm addressing my question to the right e-mail address, I hope I do. Actually I have a little problem concerning writing a code in R. I try to briefly sum up my problem. As you can see below, I created the functions "Equation1" and "Equation2" with some conditions. Equation1 <-function(x){ if

I have written a wrapper for heatmap.2 called heatmap.w.row.and.col.clust which auto-generates breaks using breaks<-round((c(seq(from=(-20 * stddev), to=(20 * stddev))))/20, digits = 2) #(stddev in this case = 2.5) This has always worked well in the past but now I am getting an error that non-finite breaks are being generated. Drilling down, it seems that my wrapper is generating finite

Hi, I have a Dataframe. A B C D 0.1 0.7 0.9 0.8 0.20 0.60 0.80 0.70 0.40 0.80 0.70 0.76 I need a resultant dataframe (A-B) (C-D) -0.6 0.1 -0.40 0.1 -0.40 -0.06 Any suggestion would be of a great help Thanks Ramya -- View this message in context: http://r.789695.n4.nabble.com/Finding-a-Diff-within-a-Dataframe-columns-tp3247943p3247943.html Sent from

I have a dataframe df with two columns x and y. I want to count the number of times a unique x, y combination occurs. For example x<- c(1,2,3,4,5,1,2,3,4) y<- c(1,2,3,4,5,1,2,4,1) df<-as.data.frame(cbind(x, y)) #what is the correct way to use ddply for this example? ddply(df, c('x','y', summarize, ??) #desired output -- format and order doesn't matter # (x, y)

Dear list, I have observed a weird behaviour from R --- apologies if I am missing something obvious! df3f826f28 df3f826f28 Say you type in R: >c.preec <- 10074 >c.gd <- 2200 >p1 <- .2 >c.neo <- p1*9451 + (1-p1)*3883 >n.preec <- 3710 >n.gd <- 2650 >n.neo <- 2120 >n.pcos <- 53000 >unit.met <- 94 >cost.met <- 94*n.pcos >effect <-

R 2.10 Windows 7 I am trying to plot three graphs on top of each other. I need to have the axises perfectly aligned. For some reason the ticks on the y axes are slightly off so they do not perfectly align. Can someone tell me how I can get the to overlay each other perfectly? I thought the yaxp parameter would solve my problem, but it does not. My data and code follows: >

Hi all, I have 2 questions: 1)How do I calculate the mean on an imported txt file? I've imported the file below and that's what it looks like imported. How do I then calcuate the mean, median, or mode on the column LeafArea using the desktop R package? Any help would be greatly appreciated!! Thanks, Nat LeafType Leaflets LeafArea ShapeRatio LeafWeight LeafThickness 1 1

On Thu, Jun 09, 2011 at 03:44:40PM +0200, Duncan Sands wrote: > Hi Jack, thanks for doing this. > >> Below are the tabulated compile times and executable sizes. >> >> A) gcc 4.5.4svn using -msse3 -ffast-math -O3 -fno-tree-vectorize >> B) gcc 4.5.4svn/dragonegg using -msse3 -ffast-math -O3 -fno-tree-vectorize -fplugin-arg-dragonegg-enable-gcc-optzns >> C)

I'm getting constantly high numbers of page reclaims & involuntary context switches for dovecot/auth. page reclaims = minor faults = cpu switching back to system-mode, But why is the auth process doing that so excessively? Same for the large number of involuntary context switches... Attached is my "dovecot -n" output. Date: Sun, 07 Nov 2010 20:40:34 +0100 type real

Greetings.? My wife is teaching an introductory stat class at UC Davis.? The class emphasizes the use of simulations, rather than mathematics, to get insight into statistics, and R is the mandated tool.?? A student in the class recently inquired about different approaches to sampling from a binomial distribution.? I've appended some code that exhibits the idea, the gist of which is that using

Hi there, Here is a minimum working example: ---------------------------------------------------------------- lower = 0 upper = 1 n_bins = 50 interval = (upper - lower) / n_bins bins = vector(mode="numeric", length=n_bins) breaks = seq(from=lower + interval, to=upper, by=interval) for(idx in breaks) { bins[idx / interval] = idx } print(bins)

Hi, I'm a database admin for a database which manage chromatographic results of products during stability studies. I use R for the reporting of the results in MS Word through R2wd. But now I think I need your help: suppose we have the following data frame: ID rrt Mnd Result 1 0.45 0 0.10 1 0.48 0 0.30 1 1.24 0 0.50 2 0.45 3 0.20 2 0.48 3 0.60 2 1.22 3 0.40 3

Sample code from *R CookBook* (awesome book btw) *11.12: Finding the Best Power Transformation (Box-Cox) Procedure* require(MASS) x <- 10:100 eps <- rnorm(length(x), sd = 5) y <- (x + eps)^(-1 / 1.5) m <- lm(y ~ x) # ***************** What does the *which* in this line do??? ******************************************** plot(m, which = 1) [[alternative HTML version deleted]]

Duncan, Here are the complete benchmarks rerun against gcc 4.5.4 built with... Using built-in specs. COLLECT_GCC=gfortran-fsf-4.5 COLLECT_LTO_WRAPPER=/sw/lib/gcc4.5/libexec/gcc/x86_64-apple-darwin11.0.0/4.5.4/lto-wrapper Target: x86_64-apple-darwin11.0.0 Configured with: ../gcc-4.5.4/configure --prefix=/sw --prefix=/sw/lib/gcc4.5 --mandir=/sw/share/man --infodir=/sw/lib/gcc4.5/info

I am trying to get the Vim-R-Plugin<http://www.vim.org/scripts/script.php?script_id=2628> to work with gvim and R on Windows 7. When I open a .R file in VIM, it complains and says ""Python interface must be enabled to run Vim-R-Plugin." I have installed pywin32 for python 2.7, and added the following 4 lines to my _vimrc per the instructions

On Wed, May 29, 2013 at 03:25:30PM +0200, Duncan Sands wrote: > Hi Jack, I pulled the loop vectorizer and fast math changes into the 3.3 branch, > so hopefully they will be part of 3.3 rc3 (and 3.3 final!). It would be great > if you could redo the benchmarks rc3. > Duncan, As requested, appended are the updated Polyhedron 2005 benchmark results with both RC1 and RC3 llvm 3.3

Hi 2 all ! I have problems with concurrent filesystem actions on a ocfs2 filesystem which is mounted by 2 nodes. OS=RH5ES and OCFS2=1.2.6 F.e.: If I have a LV called testlv which is mounted on /mnt on both servers and I do a "dd if=/dev/zero of=/mnt/test.a bs=1024 count=1000000" on server 1 and do at the same time a du -hs /mnt/test.a it takes about 5 seconds for du -hs to execute: 270M

Hello, I'm writing from the otherside of the world from where my systems are, so details are coming in slow. We have a 6TB OCFS2 volume across 20 or so nodes all running OEL5.4 running ocfs2-1.4.4. The system has worked fairly well for the last 6-8 months. Something has happened over the last few weeks which has driven write performance nearly to a halt. I'm not sure how to proceed, and