similar to: Version control (git, mercurial) for R packages

I've changed to Mercurial for my working copies of survival for a number or resons not relevant to this post. When I do R CMD check, I get some warnings about certain files in the .hg directory with odd names. I've added the following 2 lines to my .Rbuildignore file without effect ^\.hg$ ^\.hg.* I'm not a Perl user so perhaps I'm reading the help page wrong. Any pointers? This

I've been kicking the following idea around for a while, and am now proposing to put some version into 1.7.0. I'd be interested in comments on the desirability and the design, before I start writing any code. S4 introduced a file .S.chapters which can contain a list of S chapters (equivalent to R packages) to be loaded on start-up. This was the germ of this proposal. Proposal: Extend

Dear All, I have been working on building a new version of the Wavethresh package for some time now. Having build a working version on Linux, I am getting the following error when checking on Windows: C:\Rpackages\R\rw2000\bin>Rcmd check wavethresh * checking for working latex ... OK * using log directory 'C:/Rpackages/R/rw2000/bin/wavethresh.Rcheck' * checking for file

> 4) One problem with saving an R session and then restoring it is that > the packages in use are not reloaded. Quitting an R session and > saving could write .Rpackages in the current directory (with the > library recorded if it were not the default). Then restarting a > session in that directory would restore the loaded packages > automatically. I've been

== Summary == * Problem: BibTeX entries extracted from R packages via citation() require too much manual editing to be of general use. * Proposal: Date: fields should be made mandatory in package DESCRIPTION files, perhaps beginning with warnings from R CMD check * Proposal: Package authors should be encouraged to use a (new) Contributors: field in the DESCRIPTION file rather than packing all

Back in 2010 I raised this issue, and there was some discussion, https://stat.ethz.ch/pipermail/r-devel/2010-November/058987.html The goal, then, as now is to have a way to produce a bibtex-clean .bib file (i.e., not requiring manual editing except in unusual circumstances) reflecting installed packages for use in writing where one often needs/wants to cite all packages used in a given

????? Thanks.? I'm still having problems: ??? ??????? 1.? I went to "github.com" and logged in with my standard GitHub account ??? ??????? 2.? Then I clicked "+" in the upper right, just left of my GitHub ID icon, and selected "Import a repository", as Lionel suggested. ??? ??????? 3.? " Your old repository?s clone URL" =

I am trying to rasterize a SpatialPolygon object by a RasterBrick object. The documentation of the raster::rasterize function explicitly says this is allowed. Here's what I am doing # load the raster package library("raster") # create a raster brick object using the example from the brick function documentation b <- brick(system.file("external/rlogo.grd",

Hello, I created a library for a bunch of functions that I use frequently so that I dont have to carry duplicate copies around to wherever I fire up an R sesssion. However, I have problems locating the help files for those functions. Here are some details. I created the library "myR" and installed this in /home/royle/R using: R INSTALL -l /home/royle/R /home/royle/Rpackages/myR

Hello, I created a library for a bunch of functions that I use frequently so that I dont have to carry duplicate copies around to wherever I fire up an R sesssion. However, I have problems locating the help files for those functions. Here are some details. I created the library "myR" and installed this in /home/royle/R using: R INSTALL -l /home/royle/R /home/royle/Rpackages/myR

Dear friends, I am building an R package called *mypackage*. I followed every possible steps (to my understanding) for the same. I got following problem while doing *R CMD check mypackage*. * installing *source* package 'mypackage' ... ** libs cygwin warning: MS-DOS style path detected: C:/PROGRA~1/R/R-213~1.0/etc/i386/Makeconf Preferred POSIX equivalent is:

I'm attempting to build an R package for distribution and am working from the directions found at http://www.maths.bris.ac.uk/~maman/computerstuff/Rhelp/Rpackages.html#Wi n-Win I've read through Writing R Extensions and various other "helpful" web sites. I've installed all relevant software (perl, cygwin, mingwin, hhc.exe). Here is what I have done so far: 1) Sourced data

Dear all, I am trying to submit an R-package to CRAN. In preparation I do run R_INSTALL_TAR=/bin/tar R CMD check --as-cran parallelize.dynamic_0.9.tar.gz and the command finishes without warnings or errors. As a final output I get NOTE: There was 1 note. See ?.../Rpackages/parallelize.dynamic/parallelize.dynamic.Rcheck/00check.log? for details. The file contains the standard output of the

Hi, As Frank M. Howell noticed (and probably other users), the Windows binaries for DCluster I put in my web page are not working... I have compiled the source code again and know it does. Please, download it again, and sorry for the inconvenience. The URL is http://matheron.uv.es/~virgil/Rpackages/DCluster DCluster is a package that implements some methods for the detection of spatial

Hi all, I am trying to install a custom package from its source using windows. Using this guide http://www.maths.bris.ac.uk/~maman/computerstuff/Rhelp/Rpackages.html I've gotten to the fifth step, but I get the following error in the command window: "'sh' is not recognized as an internal or external command, operable program or batch file." I saw in the help archives that

Hello, After running R CMD check on my package I received the following error on package dependencies: * using log directory 'C:/z-zBackup/Nuvera Bio on Iatros01/Development/RPackages/nvNormalize/nvNormalize.Rcheck' * using R version 2.9.1 (2009-06-26) * using session charset: ISO8859-1 * checking for file 'nvNormalize/DESCRIPTION' ... OK * checking extension type ... Package *

HI, (1) ...thanks for the last comments to tcltk & Win2000. (2) - i'm newbie in tcl/tk but would like learn fast and develop (learning by doing) a tcl/tk clusterAnalysis application which combine some clusterMethods from different Rpackages. i use the tkttest.R example as "reference" and become not finished for my "first" step???? (3) how is it possible that the code

Dear all, Is there an elegant way to add citations of packages when using Sweave? Ideally I'd like a function which creates a Bibtex-file with the packagenames as keys. The idea is to use \cite{packagename} or \cite{R} in LaTeX. I know you can get the Bibtex entry with toBibtex(citation("packagename")). But after updating R or a package one needs to update the bib-file too. When

Hi, I seem to be having a problem adding the following two raster objects together - one is a rasterLayer, the other is a rasterBrick. The extent, resolution, and origin are the same, so according to my understand it should work. The objects look like so: > obs.clim class : RasterLayer dimensions : 60, 200, 12000 (nrow, ncol, ncell) resolution : 0.5, 0.5 (x, y) extent : -70,

I am developing a package that imports some functions from another package. The imported package (qcc) does not have a namespace and this is causing problems with loading of my package, which has a namespace. Is there a workaround to allow loading the namespace-less package? I searched the archives and found a suggestion that the package should be included in the Depends list, but this has not