similar to: Modifying whiskers in boxplots?

Hi all, I'm just getting started with R and I would appreciate some help. I'm having trouble creating a boxplot with whiskers at the 95th and 5th percentiles instead of at 1.5 * IQR. I have read the relevant documentation, and checked existing mails on this topic. I found a small modification that should work : https://stat.ethz.ch/pipermail/r-help/2001-November/016817.html and tried to

Dear all, I constructed this function called my.boxplot.stats by replacing fivnum() with quantile() in function boxplot.stats(). So I can try different quantile methods in bwplot(). The problem is I couldn't pass different values to the "type" argument to my.boxplot.stats, which in turn is an argument in bwplot(). Now I just have to manually change the "type" value in

Hi, I have two questions want to ask. 1. If I have a matrix like this, and I want to figure out the rows whose value in the 3rd column are less than 0.05. How can I do it with R. hsa-let-7a--MBTD1 0.528239197 2.41E-05 hsa-let-7a--APOBEC1 0.507869409 5.51E-05 hsa-let-7a--PAPOLA 0.470451884 0.000221774 hsa-let-7a--NF2 0.469280186 0.000231065 hsa-let-7a--SLC17A5

Thanks for writing this great piece of code. x = rnorm(100) boxplot(x) # you shouldn't see any outliers here although sometimes yow will # lets add some outliers intentionally x = c(21, 20, 25, x) # now 10, 15 and 20 are outliers myboxplot <- boxplot(x) # now you should see your three outliers myboxplot$out # it will print the values of the outliers How does one amend

Dear R-Users! My aim is to produce boxplots without the outliers included in the plot. I started to write a function that looks something like: myboxplot <-function(x,fa) { bpdata <- boxplot(x~fa,plot=FALSE) bpnames <- names(bpdata) for (JJ in bpnames) { command <- paste("bpdata$",JJ,"$out <- numeric(0)",sep=""); eval(command) }

Hi everyone, I think I have found a minor issue with the R function "boxplot.stats". But before I make such a rash comment, I'd like to check my facts by fixing what I think is the problem. However, why I try to do this, R does not behave as I expect. Can you tell me what I'm doing wrong? If I use the command: debug(boxplot.stats) I am allowed to step through the code as

Hello, I am trying to use the p.adjust function for multiple testing. here is what i have 9997 201674_s_at 0.327547396 9998 221013_s_at 0.834211067 9999 221685_s_at 0.185099475 I import them from excel have have the gene symbol as well as the pvalue here is the issue > pa<-p.adjust(pt,method="BH") Error in p[nna] : object is not

Dear R Helpers, I have run into a problem trying to perform a number of actions on a set of quantmod data objects through a loop and I am hoping that this is an easy problem for someone else as opposed to very difficult for me. The example task is to get the first three objects of the quarterly balance sheet for a number of companies from the getFinancials object and put them together into a

Hi, I'm new to the whole R-thing as a replacement for Matlab, not disappointed sofar ;) I found out how to make nice looking boxplots, but i also would like the make a boxplot with 5% and 95% instead of the standard 25 and 75% quantiles. My csv input looks something like: LOCATION FILTER NR DATE VALUE MONTH Peelhorst01 1 14-Jan-94 23.07 1 Peelhorst01 1 28-Jan-94 23.68 1 Peelhorst01 1

Dear list, I have a problem with freq from prettyR. Please have a look at my syntax with a litte example: library(prettyR) #Version 1 test.df<-data.frame(q1=sample(1:4,8,TRUE), gender=sample(c("f","m"),8,TRUE)) test.df freq(test.df) #No error message #Version 2 test.df<-data.frame(gender=sample(c("f","m"),8,TRUE), q1=sample(1:4,8,TRUE)) test.df

Hi All.. Am working on continous backup of mailboxes using rsync(for e.g by running rsync every 2 min) Things gets more complicated when users create Subfolders in INBOX , SENT , etc.. If anyone among you did that plz guide & advise. Thanks CoolAtt _________________________________________________________________ Your E-mail and More On-the-Go. Get Windows Live Hotmail Free.

Dear all, It was a pleasure to meet you at Iowa State University. Two days ago I submitted two experimental packages to CRAN (hope it will be there soon): rindex: quick indexing of large objects (currently only character, see ?index) regtest: some first support for automated regression testing (heavily used in \dontshow{} section of ?index) With rindex you can for example i <-

People, It appears that there is no way of getting Boxplots to plot using Mean, SD, Max & Min - is there something else that would do what I want? I couldn't find it . . Thanks, Phil. -- Philip Rhoades GPO Box 3411 Sydney NSW 2001 Australia E-mail: phil at pricom.com.au

--0__=88256B040001210F8f9e8a93df938690918c88256B040001210F Content-type: text/plain; charset=us-ascii {Please ignore earlier message; I forgot R.version} Not sure whether the R pdf driver is the problem, or some HP problem, or local, but the zip file below has a simple R script [pdfbug.r] using pdf () to create R2pdf.pdf that causes a "79.00FE PRINTER ERROR" on a HP 5000 N LaserJet

Sorry to repost this, but it looks like it's getting buried in r-help (originally posted October 5: my experience says that if it hasn't been answered by then it won't be). I wouldn't bother, but I'm worried that r-devel might be better, *and* a previous e-mail of mine on the subject in January also seemed to get buried. Synopsis: boxplot notches look weird when notches are

A function I've been using for a while returned a surprising [to me, given the data] error recently: Error in plot.window(xlim, ylim, log, asp, ...) : Logarithmic axis must have positive limits After some digging I realized what was going on: x <- c(10460.97, 10808.67, 29499.98, 1, 35818.62, 48535.59, 1, 1, 42512.1, 1627.39, 1, 7571.06, 21479.69, 25, 1, 16143.85, 12736.96,

https://bugzilla.netfilter.org/show_bug.cgi?id=898 Summary: You can not add a non-name set with more than 255 elements aprox. Do not show any error. Product: nftables Version: unspecified Platform: x86_64 OS/Version: Debian GNU/Linux Status: NEW Severity: enhancement Priority: P5

Hi. In order for restoration to work fine, I have to create a folder using the interface (e.g RounCube) which also creates the required structures. Then I copied the emailfile e.g xyz:s to /myrestoredemail/cur/ How do i properly create a folder with its structures(index,etc) without using the RoundCube web inteface ? Thanks CoolAtt

Hi All. I want to know how filenames are changed by dovecot e,g more details on how it renames the files when a mail is read. For read mails i found that it appends an S. 1264579250.P22376Q0M765148.ecs,S=1161:2 1264579250.P22376Q0M765148.ecs,S=1161:2,S Want to know if other modifications done in file names in INBOX & in SENT (maildir/.Sent/cur) Thanks CoolAtt

Hi, I tried the plugin but it is not working. Am using virtual mailboxes. I added the following in dovecot.conf then restarted dovecot. Please guide me to the correct configuration. ############################## namespace private { prefix = separator = / inbox = yes } # namespace for lazy_expunge plugin: namespace private { prefix = .EXPUNGED/ separator = / location =