Displaying 20 results from an estimated 400 matches similar to: "Reading in tab (and space) delimited data within a script XXXX"
2009 Jul 11
3
Reading data entered within an R program
Dear R-helpers,
I know of two ways to reading data within an R program, using
textConnection and stdin (demo program below). I've Googled about and
looked in several books for comparisons of the two approaches but
haven't found anything. Are there any particular advantages or
disadvantages to these two approaches? If you were teaching R beginners,
which would you present?
Thanks,
Bob
2006 Dec 15
1
Switching labels on a factor
Hi All,
I'm perplexed by the way the unclass function displays a factor whose
labels have been swapped with the relevel function. I realize it won't
affect any results and that the relevel did nothing useful in this
particular case. I'm just doing it to learn ways to manipulate factors.
The display of unclass leaves me feeling that the relevel had failed.
I've checked three books
2006 Dec 18
1
Applying variable labels across a data frame
Hi All,
I'm working on a class example that demonstrates one way to deal with
factors and their labels. I create a function called myLabeler and apply
it with lapply. It works on the whole data frame when I subscript it as
in lapply( myQFvars[ ,myQFnames ], myLabeler ) but does not work if I
leave the [] subscripts off. I would appreciate it if anyone could tell
me why. The program below
2012 Jan 04
1
Warning message about closing a connection XXXX
Hello everyone,
After running the following code, I obtain this error message.
> mydata <- read.table(textConnection(mystring),
+ header=TRUE, sep=",",
+ row.names="id", na.strings=" ")
> mydata
Warning message:
closing unused connection 3 (mystring)
=====
However, when I attempt to run read.table() again and immediately submit
the close() function
2006 Sep 03
2
Running cox models
Hi,
I'm reading van Belle et al "Biostatistics" and trying to run a cox test using
a dataset from:
http://faculty.washington.edu/~heagerty/Books/Biostatistics/chapter16.html
(Primary Biliary Cirrhosis data link at top of the page),
I'm using the following code:
--------------- start of code
library(survival)
liver <-
2006 Nov 25
3
Multiple Conditional Tranformations
Greetings,
I'm learning R and I'm stuck on a basic concept: how to specify a
logical condition once and then perform multiple transformations under
that condition. The program below is simplified to demonstrate the goal.
Its results are exactly what I want, but I would like to check the
logical state of gender only once and create both (or any number of)
scores at once.
2008 Aug 21
1
replacing missing values in a dataframe with reference values.
Any thoughts on the following I'd be most grateful - I'm sure there is
an easy and quick way to do this but I'm having a mental block this
evening. Essentially, I'm trying to replace missing data in my dataset
with reference values based on age and sex.
So an example dataset is
set.seed(1)
X = data.frame(age=rnorm(10, 50, 10), sex=rbinom(10, 1, 0.5),
A=rnorm(10), B=rnorm(10))
2012 Aug 07
1
Which R function for GLMM with binary response, nested random factors with temporal correlation?
Despite lots of investigation, I haven't found any R packages might be suitable for the following problem. I'd be very grateful for suggestions.
I have three-way nested data, with a series of measures (obs) taken in quick succession (equal time spacing) from each subject on different days. The measures taken on the same day are temporally correlated, so I'd like to use an AR1
2008 Oct 28
1
lattice: overlap histogram
Dear R users,
Is it possible to have an overlap histogram plot? For example:
stuff <- data.frame(Mode = c("Land", "Air"), AgeGroup = c("Young", "Adult",
"Old"), Value = sample(1:300))
histogram( ~Value | AgeGroup * Mode, data = stuff, auto.key = TRUE)
Instead of having 2 * 3 panel, I want to have just 3 panel, overlapping the
"Mode"
2004 Jan 30
1
Trouble plotting with factor
With R 1.8.1 running in Fedora Core 1 Linux, I am having some trouble
recoding and ploting some factor variables.
First, can I give you some example data?
Here is a column of names for age groups:
agegroups <- c( "15-19", "20-24", "25-29","30-34", "35-39",
2009 Feb 12
3
getting all pairwise combinations of elements in a character string
I'm able to do this as follows, but am wondering if anyone knows a
simpler way which still avoids explicit loops?
> (mystring <- letters[1:5])
[1] "a" "b" "c" "d" "e"
> unlist(sapply(mystring[-length(mystring)],
+ function(x)
paste(x,mystring[(grep(x,mystring)+1):length(mystring)],sep="")))
a1 a2 a3
2007 May 28
2
[LLVMdev] Problem in llvm gcc back-end
HI,
While I testing some code, I found some problem on Union handling.
I've wrte following test code, and it has union assignment.
The code's output is
from pointerToUnion: chars mystring, length 64
from original: chars mystring, length 8000
It's caused by second char member(charlength) of LongestMember.
For union assignment, llvm-backend seems generates assigning each
member of
2011 Feb 13
3
String manipulation
Please consider following string:
MyString <- "ABCFR34564IJVEOJC3434"
Here you see that, there are 4 groups in above string. 1st and 3rd groups
are for english letters and 2nd and 4th for numeric. Given a string, how can
I separate out those 4 groups?
Thanks for your time
[[alternative HTML version deleted]]
2010 Mar 26
6
Rake argument error
Hi,
I''m having a problem loading a sample data with simple rake command.
rake db:fixtures:load
When I run the above command,I get the following error
$rake db:fixtures:load
(in /home/raghu/www/photos)
rake aborted!
a YAML error occurred parsing
/home/raghu/www/photos/test/fixtures/photos.yml. Please note that YAML
must be consistently indented using spaces. Tabs are not allowed. Please
2011 Aug 04
3
#create tests fail when I add FriendlyId to my model
I am doing controller testing, and I can''t seem to get the create
method test to pass when friendly_id is added to the mix. If I comment
it out of the model, the tests all pass perfectly. The moment I add it
back in, the error looks like this:
1) Error:
test_create_valid(BrandsControllerTest):
FriendlyId::BlankError: FriendlyId::BlankError
2007 Nov 20
3
How to test views with Nested Resources and Partials
Hi everyone,
I am relatively new to rspec and I am running into a wall in testing my
views. I have a RESTful resource Contracts with a nested resource of
Line_items.
I am trying to figure out how to test the "edit" form of the Line_items.
What complicates this is the nested routing and how to account for it,
and that there is a partial form (_form.haml) that both the edit.haml
and
2006 Aug 14
4
Test for string in string
Hi,
Is there an easy way to test if a substring exists in a string?
I''m using this check:
if mystring.index(substring) > 0
but it doesn''t seem to be working....
Thanks!
--
Posted via http://www.ruby-forum.com/.
2008 Aug 06
2
matching problem
I have a matching problem that I cant solve.
mystring = "xxx{XX}yy{YYY}zzz{Z}" where "x","X","y","Y","z","Z" basiclly can
be anything, letters, digits etc. I'm only interested in the content within
each "{}".
I am close but not really there yet.
library(gsubfn)
strapply(mystring,"\\{[^\\}]+",, perl=F)
2011 Oct 05
1
Weird behaviour of tab characters in a string in R (vs Python)
Hello,
I wanted to parse some information from a text, where fields are tab
separated.
When I copy the text into an R session (under emacs) like:
mystring <- "field1 field2 field3"
the tab character is replaced by a single space!
For ex, if I type mystring, I get:
"field1 field2 field3"
The tabs have disappeared!!!
I checked with Python that the text I copied was tab
2006 Jul 06
6
Class variables in templates/layouts
I''m having problems with class variables.. I have a class:
class Content::ApplicantsController < ApplicationController
layout "mylayout"
@@tab = "mystring"
[... the rest is standard scaffold-created stuff ...]
and a layout (mylayout.rhtml):
[...]
<title><%= @@tab.capitalize %></title>
[...]
And I keep getting this error:
uninitialized