similar to: png output on a server?

Hi, It seems that anti-aliasing in png(type = 'cairo') is not well supported for the point symbols without boarders, e.g. pch = 16. The Cairo package works well, though. You can compare png() with CairoPNG(): png(): http://i.imgur.com/8niB3jX.png CairoPNG(): http://i.imgur.com/FZBJOxm.png f = function(dev, ..., main = '') { dev(...) plot(c(1, 2, 1, 2), c(1, 1, 2, 2),

(moved from R-help) I tried this on Ubuntu with R-2.14.1 built from source, and I do not get the segfault problem. (I don't at the moment have a debian binary R, or I would confirm whether I get the segfault problem.) My sessioninfo() is reporting additional information about namespace imports: > library(ggplot2) Loading required package: reshape Loading required package: plyr

An Sweave file, 'test.Rnw': \documentclass{article} \title{Sweave minimal} \author{MK} \begin{document} \maketitle We try Sweave: <<1>>= data(airquality) summary(airquality) x <- airquality[1, 1] @ I try Sexpr: \Sexpr{x} We plot: \begin{center} <<2, fig=TRUE, echo=FALSE >>= boxplot(Ozone ~ Month, data = airquality) @ \end{center} \end{document} I check the

Hi dear all, In my laptop(ubuntu 11.10 64bit), I maintained a released R (2.14) and a developmental R, I can specify qplot(..., alpha = ) in R 2.14 , but when I try to use transparency in developmental R, I got a warning message and the plot is clearly not I want. minimal example: > qplot(data = mtcars, x = mpg, y = cyl, alpha = cyl) Warning message: In grid.Call.graphics(L_points, x$x, x$y,

Hi dear all, In my laptop(ubuntu 11.10 64bit), I maintained a released R (2.14) and a developmental R, I can specify qplot(..., alpha = ) in R 2.14 , but when I try to use transparency in developmental R, I got a warning message and the plot is clearly not I want. minimal example: > qplot(data = mtcars, x = mpg, y = cyl, alpha = cyl) Warning message: In grid.Call.graphics(L_points, x$x, x$y,

Hi all, I have been having problems generating png files on a Mac running OS X 10.6.8. Here's a simple example > png("foo.png", type = "cairo"); plot(1:10); dev.off(); null device 1 libpng warning: Application built with libpng-1.2.26 but running with 1.5.2 The resultant file is of size 0 Kb. Is this the proper place to report this issue? Or should

While running a long script which source()s other scripts I get the following warning: Warning message: In t(object$S[[1]]) : bytecode version mismatch; using eval I cannot replicate it if I run the sourced files line by line though... What is that error? And do I care about it? It doesn't seem to affect my output as far as I can tell. Thanks! Justin > sessionInfo() R version

Hi, I am having a trouble parsing dates using strptime() that I get in the format of year and week number. The data looks like this "201127" which means year 2011 and week 27. I would like to graph this using ggplot but then I get a gap between 201054 and 201101 so I thought I would just easily convert it. I tried to use strptime and as.Date and the format string of %Y%W but it seems

I want to use the caret package and found out about the timingSamps obtion to obtain the time which is needed to predict results. But, as soon as I set a value for this option, the whole model generation fails. Check this example: ------------------------- library(caret) tc=trainControl(method='LGOCV', timingSamps=10) tcWithout=trainControl(method='LGOCV')

Can anyone suggest why this file http://www.mediafire.com/?afeyhhpacaq is refusing to open for me.? I must admit I don't know all its history but the original data was taken from an OOo spreadsheet that I edited (good bit of copying and pasting and the month variable added by hand in OOo Calc) and, then,saved as a csv file. It was not originally an English language file as far as I can

Dear list, I have two questions regarding grid.symbols() in the grImport package. This package allows you to import a vector graphic in R, and grid.symbols() can be used to plot the resulting glyph at arbitrary locations in a grid viewport. I have tried the code in the grImport vignette, which is most interesting, however I am stuck with two problems: 1- Is there a possibility to create a

I am trying to create a simple dot-plot in ggplot2 with a solid line from the y-axis to the dot, something I first saw in Cleveland's 1984 book What I would like is to have the graph start at zero on the x-axis but leave some space on the right side of the plot area. I assumed that I should be able to do this with expand() in scale_x_continuous() but either I'm wrong or just don't

> sessionInfo() R version 2.15.0 (2012-03-30) Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit) locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 attached base packages: [1] grid datasets splines utils stats [6] graphics grDevices methods base other attached packages: [1] effects_2.1-0 colorspace_1.1-1 [3] nnet_7.3-1

Dear list, I encounter an error when I try to use ddply to generate means as follows: fun3<-structure(list(sector = structure(list(gics_sector_name = c("Financials", "Financials", "Materials", "Materials")), .Names = "gics_sector_name", row.names = structure(c("UBSN VX Equity", "LLOY LN Equity", "AI FP Equity",

Clearly, I don't understand what order() is doing and as ususl the help for order seems to only confuse me more. For some reason I just don't follow the examples there. I must be missing something about the data frame sort there but what? I originally wanted to reverse-order my data frame df1 (see below) by aa (a factor) but since this was not working I decided to simplify and order by

Hello! After performing an analysis with betadisper, package vegan I would like to plot the results - so far, so good. But I would also like to "tune" a little bit the plotting characters, as '+' and 'x' are a little to similar... My (boiled down) code: [See session info at the bottom of the mail, vegan is vegan_2.0-3] mod <- betadisper(mydata, mygroups,

I can't run fix() or edit() anymore. Did I break my system? I'm running Debian Linux with R-2.14.1. As far as I can tell, the R packages came from Debian's testing "wheezy" repository. I would like to know if users on other types of systems see the same problem. If no, then, obviously, it is a Debian-only issue and I can approach it from that point of view. And if no other

According to Hadley's ggplot book (p. 109), both the graphs below should have a legend, and yet none appears in my hands. Any suggestions? I can't see a typo. Is there a bug? library(ggplot2) data(LakeHuron) huron = data.frame(year=1875:1972,level=LakeHuron) p = ggplot(huron, aes(year)) + geom_line(aes(y= level - 5), colour = 'blue') + geom_line(aes(y= level + 5), colour

Dear all, I know this problem was discussed many times in forum, however unfortunately I could not find any way out for my own problem. Here I am having Memory allocation problem while generating a lot of random number. Here is my description: > rnorm(50000*6000) Error: cannot allocate vector of size 2.2 Gb In addition: Warning messages: 1: In rnorm(50000 * 6000) : Reached total allocation

Dear list, I have troubles with using Bayesian logistic model with count data in bayesglm. If I consider the following artificial data set, with a response y and a covariate x, in a form of row data (a) and count (b) : a<-data.frame(y=c(rep(1,10),rep(0,6)),x=c(rep(5,6),rep(4,4),rep(5,1),rep(4,5))) a$un<-1 b<-aggregate(a$un,list(y=a$y,x=a$x),sum) names(b)[3]<-"w" A