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On 29 May 2018 at 16:37, R P Herrold wrote: | On Tue, 29 May 2018, Dirk Eddelbuettel wrote: | | > On a CentOS 7 machine, I am at a loss with respect to an inability to run a | > full R CMD check as anything involving tex files ends in tears. | | Hi, Dirk | | Have fun at the upcoming conference at UIC | | I seem to have 56 font packages installed under CentOS 7 | locally, but then I work

I want write article by russian language using Sweave. For cyrillic text LaTeX use T2A encoding \usepackage[T2A]{fontenc} But in Sweave.sty we find: \RequirePackage[T1]{fontenc} It is source of critical problem. For example Rnw file $ cat estimation.Rnw \documentclass[A4paper]{article} \usepackage[T2A]{fontenc} \usepackage[utf8]{inputenc} \usepackage[russian,english]{babel}

Hi, The following command: R CMD Rd2pdf --no-preview --output=./tmp.pdf --title=test genefu-package.Rd run against this file: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/genefu/man/genefu-package.Rd (username: readonly; password: readonly) produces a very verbose error (see below) with R version 2.15.0 alpha (2012-03-07 r58622). The .Rd file has these lines in it: Version: \tab

Dear R-users, I want to give a try to Sweave and Latex but I am having some problems compiling my .Rnw files within Kile. I have followed the recommendations given in http://tolstoy.newcastle.edu.au/R/e5/help/08/10/4277, but they do not seem to address my particular problem. I am using R 2.11.0 and Kile v 2.0.83 on an OpenSUSE11.2 installation (KDE 4.3 environment). According to the log (see

Dear all, I am getting an R CMD check warning about the PDF manual. I am having a hard time finding out what is wrong, here is the log of the Rd2pdf call. The full check (and other) log is at https://api.travis-ci.org/jobs/46373922/log.txt?deansi=true if anybody is interested, and the package itself is here: https://github.com/metacran/r-builder/tree/bintex/rbuildertest Thanks, Best, Gabor

Hi, Due to a change in Rd.sty a few days ago (https://github.com/wch/r-source/commit/620eb9a#diff-3bf3d821c6faae50cd6ec931f6f63296L272), the default installation of TeXLive 2009 or 2012 no longer works when building Rd to PDF. The error log is like this: =============== Converting Rd files to LaTeX ..... Creating pdf output from LaTeX ... Error in texi2dvi(file = file, pdf = TRUE, clean = clean,

Hi, I recently switched from Mac OS X (after 7 years) to Xubuntu 12.04 and I am quite happy with it so far. I first installed R from source but I was somehow missing certain things and I thus decided (after a new Xubuntu installation which I had to make due to other reasons) to install R the "Ubuntu way": ,----[ R installation: ] | 1) sudo emacs /etc/apt/sources.list | 2) add: | deb

Hello! I use Sweave for a report and up to now I always copied Sweave.sty to a folder where I have the report. But this can be done better (or did I miss anything) with * extension of TEXMF variable in texmf/web2c/texmf.cnf or * linking /usr/lib/R/share/texmf to somewhere in /usr/share/texmf I tried with the following and I didn't need to put Sweave.sty in folder with a report: cd

Hi all I am trying to build an R package, which I have successfully done many times before, but have an error I cannot trace. I hope someone can help me. Here's is some edited output (full output below if it is useful): pdunn2 at PDunnUbuntu:~/DSdata$ R CMD build GLMsData * checking for file 'GLMsData/DESCRIPTION' ... OK * preparing 'GLMsData': * checking DESCRIPTION

dear R users, I am using sweave to generate report for my data analysis. I recently updated R ro 2.8.0, and now I have the following results when compile the the tex file generated from R. This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) %&-line parsing enabled. entering extended mode (./Lajos.tex LaTeX2e <2005/12/01> Babel <v3.8h> and hyphenation patterns for english,

After configure, make and make check on a linux Suse 7.3 box, I run make dvi and make info with no problems but get a lot of garbage to my screen during make pdf. Is this normal? Is there a bug in this part of the installation? This is part of what I get on the screen: humboldt:/usr/local/R-patched # make pdf make[1]: Entering directory `/usr/local/R-patched/doc' make[2]: Entering

Dear R?ers I?m trying to get a summary table using latex and summary in the rms package to no avail. I?m running R 2.10.1, Mac OS X snow leopard and I have the mactex 2009 distribution installed. Any obvious things I?m missing? //M options(digits=3) set.seed(173) sex <- factor(sample(c("m","f"), 500, rep=TRUE)) age <- rnorm(500, 50, 5) treatment <-

Hi there, I'm rying to 'turn' an Schunk in an .Rnw file(Xemacs-21.4.13, ESS-5.2.8, R-2.1, miktex-2.4.1705). Has anyone got the isorot package to work with Sweave? JC example test.Rnw: \documentclass[a4paper]{article} \usepackage{Sweave} \usepackage{isorot} \rotdriver{dvips} \clockwise \title{Sweave Example 1} \author{apologies to Friedrich Leisch } \begin{document} \maketitle

Hi, I recently compiled 1.6 on NT4 but I am having a problem with Sweave. Using the inbuilt 'Sweave-test-1.Rnw' file as an example: ------- > library(tools) > testfile <- file.path(.path.package("tools"), "Sweave", "Sweave-test-1.Rnw") ## create a LaTeX file Sweave(testfile) testfile <-

Hello, can anyone explain the following error I get when trying to use the CHECK command to check a new version of my pakcage under 1.4.0? ****** ./R CMD check ~/GLMMGibbs.0.5.1/GLMMGibbs * checking for working latex ... OK * using log directory `/homef/jonm/R-1.4.0/bin/GLMMGibbs.Rcheck' ... <Installs library, documentation, and then performs various tests, including the example,

Hi, I've just tried to run example-3 from Friedrich Leish. I'm using R 1.8.1 and MiKTeX 2.2 on Windows XP. I go === > library(tools) > Sweave("example-3.Snw") Writing to file example-3.tex Processing code chunks ... 1 : term hide 2 : echo term verbatim 3 : term tex 4 : term verbatim eps pdf You can now run LaTeX on example-3.tex === The file example-3.tex

I'm trying to use R CMD Rd2dvi and I end up at a Latex (I think) command prompt. What's missing or what am I suppose to do? Paul Gilbert _______ paul at breman:/apps/dse-versions/2000.6/dse#R CMD Rd2dvi syskern This is TeX, Version 3.14159 (Web2C 7.3) (Rd2.tex LaTeX2e <1998/12/01> Babel <v3.6k> and hyphenation patterns for american, french, german, ngerman, nohyphenation,

In the 'RWeaveLatexSetup' function in the 'tools' package in R 1.6.0 , the code below does not work (pdflatex can't find 'Sweave.sty'): if (stylepath) styfile <- file.path(R.home(), "share", "texmf", "Sweave") else styfile <- "Sweave" In R 1.5.1, that was: if(stylepath) styfile <-

Let's say I have written the following tiny .Rnw file: _________________________________________ \documentclass{article} \usepackage[utf8]{inputenc} \usepackage{Sweave} \usepackage{tikz} \usepackage{pgf} \begin{document} <<>>= sessionInfo() @ \end{document} _________________________________________ I then can go to R and use sweave to translate the .Rnw file into a .tex

Recently, I upgraded MiKTeX to the latest versions, and since then there are problems when I try to build R and/or R packages. I tried to build R 1.9.0 beta and R 1.8.1 patched I am running Windows XP Pro, SP 1 MikTeX version is This is e-TeX, Version 3.141592-2.1 (MiKTeX 2.4) (preloaded format=latex 2004.3.27) fpTeX version is This is e-TeXk, Version 3.141592-2.1 (Web2c 7.5.2) (format=latex