similar to: Sparse file troubles and rsync

Hi, I'm trying to get sparse.model.matrix to retain unused levels. I can't seem to get this working through the most obvious routes such as specifying drop.unused.levels = FALSE in the model.frame or trying to pass all levels in xlev,which is an argument to sparse.model.matrix (see code below). Any help would be gratefully received. Cheers, Jarrod fac<-factor(rep(1:10,10),

To whom it may concern, I am trying to maximize a log-likelihood function using optim. This is a simple problem with only 18 parameters. To conserve memory, I am using sparse matrices (SLAM) for some of the data matrices used in the computation of the likelihood. However, optim appears to convert the sparse matrix back to regular data format. This causes me to run out of memory as R tries to

Dear DevelopeRs, in continuing with my suite of packages on experimental design, I am stuck with an issue that appears to be related to package AlgDesign - I have tried to get it solved by Bob Wheeler, but he seems to be stuck as well. Whenever AlgDesign is loaded, some of my code does not work any more. For example, in a fresh R session: require(DoE.base) fac.design(nlevels=c(2,6,2))

tree: https://git.kernel.org/pub/scm/linux/kernel/git/mst/vhost.git vhost head: 84d40e4b4bc64456abf5ef5663871053b40e84ac commit: fee8fe6bd8ccacd27e963b71b4f943be3721779e [38/45] vdpa: make sure set_features in invoked for legacy :::::: branch date: 5 hours ago :::::: commit date: 6 hours ago config: x86_64-randconfig-s021-20200727 (attached as .config) compiler: gcc-9 (Debian 9.3.0-14) 9.3.0

tree: https://git.kernel.org/pub/scm/linux/kernel/git/mst/vhost.git linux-next head: b072ae74df177c3ad7704c5fbe66e3f10aad9d4e commit: b072ae74df177c3ad7704c5fbe66e3f10aad9d4e [12/12] vhost: use vhost_desc instead of vhost_log reproduce: # apt-get install sparse # sparse version: v0.6.1-101-g82dee2e-dirty git checkout b072ae74df177c3ad7704c5fbe66e3f10aad9d4e make

We copied the virtio_iommu_config from the virtio-iommu specification, which declares the fields using little-endian annotations (for example le32). Unfortunately this causes sparse to warn about comparison between little- and cpu-endian, because of the typecheck() in virtio_cread(): drivers/iommu/virtio-iommu.c:1024:9: sparse: sparse: incompatible types in comparison expression (different base

Dear all, I've been getting different results from the sparse and dense version of model.Matrix when used with sparse contrasts and interactions between factors. The same happens when using model.matrix and sparse.model.matrix. When calculating list.contrasts I get the same results for sparse and dense contrasts (except the type of the matrix is different of course). However, when I use these

Hello, Arnd, As you asked, here's a pull request. This has been in linux-next apparently with no ill effects. The following changes since commit 99975cc6ada0d5f2675e83abecae05aba5f437d2: vhost/net: length miscalculation (2015-01-07 12:22:00 +0200) are available in the git repository at: git://git.kernel.org/pub/scm/linux/kernel/git/mst/vhost.git tags/uaccess_for_upstream for you to

Hello, Arnd, As you asked, here's a pull request. This has been in linux-next apparently with no ill effects. The following changes since commit 99975cc6ada0d5f2675e83abecae05aba5f437d2: vhost/net: length miscalculation (2015-01-07 12:22:00 +0200) are available in the git repository at: git://git.kernel.org/pub/scm/linux/kernel/git/mst/vhost.git tags/uaccess_for_upstream for you to

tree: https://git.kernel.org/pub/scm/linux/kernel/git/mst/vhost.git config-endian head: 6aef2378a564fea8e69c0419d94dc3ad9b4b7a99 commit: 0cf222ef876b95893406eebe685e595d88de0950 [33/36] virtio_net: correct tags for config space fields config: parisc-randconfig-s032-20200710 (attached as .config) compiler: hppa-linux-gcc (GCC) 9.3.0 reproduce: wget

I had a good go at implementing $subject, but it's not as easy as it seems. There was a customer request for this, although I don't think they ended up filing a BZ for it. Anyway, these are my random thoughts in no particular order. It would be nice to use `-oa sparse' etc for compatibility with virt-v2v, but that possibly closes off future options for replacing the horrible OCaml

Hi, Filesystem is a XFS. The source file isn't a sparse file, but have big chunks of \0's. $ ls -lh probeta.vdi -rw------- 1 djgera djgera 11G 2008-09-14 02:47 probeta.vdi $ ls -l probeta.vdi -rw------- 1 djgera djgera 10737459712 2008-09-14 02:47 probeta.vdi $ du -h probeta.vdi 11G probeta.vdi when copy with $ rsync -aSv --progress probeta.vdi test-sparse.vdi sending incremental

Hello, I am working with a sparse matrix that is approx. 13,900 by 14,100. My goal is to select a row out of the matrix and create a new matrix with that row repeated 13,900 times without having to do any looping. Example: Starting Matrix: exampleMatrix 3 x 4 sparse Matrix of class "dgCMatrix" [1,] 1 . . . [2,] . 1 . 0.5 [3,] . . 1 .. New Matrix:.. newExampleMatrix 3 x 4 sparse

https://bugzilla.samba.org/show_bug.cgi?id=11651 Bug ID: 11651 Summary: Can we allow --inplace and --sparse to coexist when --whole-file is in play? Product: rsync Version: 3.1.2 Hardware: All OS: All Status: NEW Severity: enhancement Priority: P5 Component: core

Dear all, I am currently working on the calculation of eigenvalues (and -vectors) of large matrices. Since these are mostly sparse matrices and I remember some specific functionalities in MATLAB for sparse matrices, I started a research how to optimize the calculation of eigenvalues of a sparse matrix. The function eigen itself works with the LAPACK library which has no special handling for

In some filesystems, typically optimized for large I/O throughputs (like IBM GPFS, IBM SAN FS, or distributed filesystems in general) a lot of lseek() operations can strongly impact on performances. In this cases it can be helpful to enlarge the block size used to handle sparse files directly from a command line parameter. For example, using a sparse write size of 32KB, I've been able to

https://bugzilla.samba.org/show_bug.cgi?id=7337 Summary: sparse files not equally sparse on destination Product: rsync Version: 3.0.7 Platform: Other OS/Version: Linux Status: NEW Severity: normal Priority: P3 Component: core AssignedTo: wayned at samba.org ReportedBy: brian at

Hi, I'm very new to working with sparse matrices and would like to know how I can column permute a sparse matrix. Here is a small example: > M1 <- > spMatrix(nrow=5,ncol=6,i=sample(5,15,replace=TRUE),j=sample(6,15,replace=TRUE),x=round_any(rnorm(15,2),0.001)) > M1 5 x 6 sparse Matrix of class "dgTMatrix" [1,] 2.983 . 1.656 5.003 . . [2,] .

Hi all! There is a need to copy sparse files (precisely VMware disk images) with rsync. For that purpose I'm using the -S (--sparse) option and they are copied just fine (the check sums of the original and file at destination are the same). However, as it is said in the manual: [quote] -S, --sparse Try to handle sparse files efficiently so they take up less space on the destination.

? "form" -> "from". Diff against latest SVN: Index: sparse.model.matrix.Rd =================================================================== --- sparse.model.matrix.Rd??? (revision 3336) +++ sparse.model.matrix.Rd??? (working copy) @@ -4,7 +4,7 @@ ?\alias{fac2sparse} ?\alias{fac2Sparse} ?\description{Construct a sparse model or \dQuote{design} matrix, -? form a formula