similar to: Need Help debugging a Java based windows application to run

Installing rJava fails consistently, whether installed via the command line as below, or through "install.packages( 'rJava' )", and whether 0.84 or 0.85 is used, with the message :- "checking JNI data types... configure: error: One or more JNI types differ from the corresponding native type. You may need to use non-standard compiler flags or a different compiler in order to

Good afternoon, A strange one - library(rJava) works for root but not for user sean On 64-bit Ubuntu 9.10, using R as root (sudo -i), I can say library(rJava) and it works fine with no error message of any kind. But logged in as myself user "sean", it can't start... sean at SeansPC:~$ R --no-save --vanilla R version 2.10.1 (2009-12-14) Copyright (C) 2009 The R Foundation for

Hi, I would like to test the new package RGG (R Gui Generator). This package requires the installation of several other package. One of them is rJava. I installed sun-java6-jdk and run the R CMD javareconf but the installation still fails ! Do you have any ideas ? * Installing *source* package ‘rJava’ ... checking for gcc... gcc -std=gnu99 checking for C compiler default output file

Apologies in advance for the long post. I'm currently using a Makefile to build my shared library. Pursuant to the R-exts manual, I'd like to switch to a Makevars file or a configure file if necessary. Having never used these types of make utilities before, I'm a bit lost. My package is quite simple. It only has one source file and one header: excelpoi.cpp excelpoi.h The reason I

Hello Everyone, After trying several ways to compile R 3.2.2 without luck, I?m reaching out for help. The ?make check? does not hanges for some reason and when trying to install a package it cannot list the download sites (see below). What could be the problem? ./configure --enable-R-shlib --enable-BLAS-shlib hostname = test uname -m = x86_64 uname -r = 2.6.32-573.7.1.el6.x86_64 uname -s =

Jose wrote: > Hello, > Although you've instaled Oracle JRE 1.8, OpenJDK is the default, as you > can see. > Remove OpenJDK and execute java -version again. Or change alternatives, or set JAVA_HOME. mark > Kind regards > > El 14 sept. 2017 5:55 p. m., "Larry Martell" <larry.martell at gmail.com> > escribi?: > >> On Thu, Sep 14, 2017 at

Hi, Dirk Eddelbuettel advised me to write here. Here is my original letter to him: I would like to enquire about package r-cran-rjava on Debian jesse. It seems that if default-jre package is not installed, but openjdk-7-jre is installed, then library(rJava) in R fails. I?ve been bitten by this today and I wonder whether this an issue of mine, or is this a possible bug. My server admin used

The R front end sets (via etc/ldpath) R_LIBRARY_PATH, including R_JAVA_LD_LIBRARY_PATH. Perhaps the later is too obliging, as I've just be caught by it in a way that took me a while to track down. One of my machines has a Sun jdk1.6.0* JDK installed, and as a result we have ${R_JAVA_LD_LIBRARY_PATH=${JAVA_HOME}/lib/amd64/server:${JAVA_HOME}/lib/amd64: ${JAVA_HOME}/../lib/amd64} What I

Hi all, i'm trying to install JGR on linux (see bottom), but it runs into errors. The bottom of the sequence below shows "JavaJD could not be found" Any suggestion, please? $ sudo apt-get install sun-java6-jdk $ sudo update-alternatives --config java There are 5 alternatives which provide `java'. Selection Alternative ----------------------------------------------- 1

Hi, I am unable to install the package rJava. I tried doing what the output suggests, but it doesn't help. How can I get R to find/recognize my Java installation? I am running R-2.15.0. waichler at snow> sudo R CMD javareconf Java interpreter : /usr/bin/java Java version : 1.6.0_22 Java home path : /usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0/jre Java compiler : /usr/bin/javac Java

Installed Fedora DS and trying to run # /opt/fedora-ds/startconsole -u admin \ -a http://lin-workstation.azapple.com:32131 /opt/fedora-ds/startconsole: Your JAVA_HOME environment variable is not set. Please set it appropriately. # rpm -qa j2re j2re-1.4.2-11.1.fc3.rf # cat /etc/profile.d/java.sh JREHOME="/usr/lib/jre/lib/i386" JAVA_HOME="/usr/lib/jre/bin"

Hi, I use Redhat Linux for R. Now I am trying to use the rJava library. I downloaded JRE beta 2 from Sun. I typed root@~]# R CMD javareconf Java interpreter : /usr/bin/java Java version : 1.6.0-beta2 Java home path : /usr/java/jre1.6.0 Java library path: $(JAVA_HOME)/lib/amd64/server:$(JAVA_HOME)/lib/amd64:$(JAVA_HOME)/../lib/amd64::/usr/java/packages/lib/amd64:/lib:/usr/lib JNI linker

Esteemed useRs and Devs, Attempts to update package:rJava to the latest version have failed. See my code and output below. Notably, as suggested here http://stackoverflow.com/questions/3311940/r-rjava-package-install-failing $ sudo apt-get install r-cran-rjava ran successfully without error or warning, but my rJava package is not updated, and remains un-updatable... Greatly appreciate any

Hi all, I downloaded and installed JGR. Then when I tried to load the package in R console, it generated the following error message: > local({pkg <- select.list(sort(.packages(all.available = TRUE))) + if(nchar(pkg)) library(pkg, character.only=TRUE)}) Loading required package: rJava using Java Runtime version 1.5.0 using JAVA_HOME = C:\Program Files\Java\jre1.5.0_01 Loading required

Hi all I have problems installing rJava on my system. ######## My system: > R.version # at R prompt platform x86_64-pc-linux-gnu arch x86_64 os linux-gnu system x86_64, linux-gnu status major 2 minor 8.1 year 2008 month 12 day 22 svn rev 47281 language R version.string R version 2.8.1

Thanks Dirk and Enrico, First clarification: I'm in this mess because I'm trying to run R 3.5.2 within Debian stable (9/"sretch") using the stretch-cran35 repository. That uses and provides r-api-35 but many of the packages depend upon r-api-3. As Johannes said a day or so back, the way around this is to use install.packages() in R to get the packages you want. That leads you

Hi, > Le 17 mai 2017 ? 00:42, Dirk Eddelbuettel <edd at debian.org> a ?crit : > > > On 8 May 2017 at 15:39, Vaidotas Zemlys wrote: > | Hi, > | > | Dirk Eddelbuettel advised me to write here. Here is my original letter to him: > | > | I would like to enquire about package r-cran-rjava on Debian jesse. It seems that if default-jre package is not installed, but

Hi folks: I'm trying to update my JGR and related packages, but run into a compile problem, that I suspect must be affecting others. I get this output when compiling rJava, JavaGD, etc.: ## checking Java support in R... present: interpreter : '/usr/bin/java' cpp flags : '' java libs : '-L/usr/lib/jvm/java-6-openjdk/jre/lib/amd64/server

> library(rJava) Error in library(rJava) : there is no package called 'rJava' > install.packages("rJava") Warning in install.packages("rJava") : argument 'lib' is missing: using '/usr/local/lib/R/site-library' --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done trying URL

I have been futzing around for days tying to get rJava to install on my freshly build Debian Lenny installation. I have R-2.9.1 installed from source in my R_HOME directory and R-2.7.1 installed via apt-get install r-recommended. I was tried many different things, but by accident started up R-2.7.1 as root and viola, successful install. I immediately exited out of R-2.7.1 and started R-2.9.1 as