similar to: install error ldpaths: No such file or directory

I've just installed r-base (several times!) using the instructions at http://cran.us.r-project.org/bin/linux/ubuntu/ and for some reason it is not creating a /etc/R/ldpaths file. I've tried a few times, tried purging, and removing everything in /etc/R and /usr/lib/R as suggested by Dirk, and reinstalling but still get $ R /usr/bin/R: line 236: /usr/lib/R/etc/ldpaths: No such file

I'm trying to install R under Ubuntu 7.10 (gutsy; Linux 2.6.22-15-generic x86_64). Following the instructions at http://cran.r-project.org/bin/linux/ubuntu/README, I installed r-base, r-base-core, and r-base-dev without any problems. When I open R, however, I get the message "Can't open /usr/lib64/R/etc/ldpaths". That file is linked to /etc/R/ldpaths, which doesn't exist

Hi Everybody, I made R (v. 2.11.1) from source with the following config option: ./configure --prefix=/mnt/ami-centos5.5-64bit-base \ --exec-prefix=/mnt/ami-centos5.5-64bit-base \ --with-tcltk All seemed to go well, but when I tested it with: /usr/sbin/chroot /mnt/ami-centos5.5-64bit-base R It told me: /bin/R: line 217:

Hello! I'm trying to install R-3.0.1 on an Ubuntu machine (64 bit, version 13.04). I have uninstalled and installed several times, but to no avail. I keep getting errors about missing ldpaths, and installing packages does not work at all. Here is the information: erin@erin-Lenovo-IdeaPad-Y480:~$ sudo apt-get install r-base Reading package lists... Done Building dependency tree Reading

On Thu, 21 Apr 2016 08:23:32 +0000 Martyn Plummer <plummerm at iarc.fr> wrote: > From: Martyn Plummer <plummerm at iarc.fr> > To: "cireyapmin at gmail.com" <cireyapmin at gmail.com>, > "r-sig-fedora at r-project.org" <r-sig-fedora at r-project.org> Subject: > Re: [R-sig-Fedora] Cannot Run On The Command Line Date: Thu, 21 Apr > 2016

When using R on a linux machine (ubuntu 8.10) which DOES NOT have LD_LIBRARY_PATH set (I particularly have it NOT set because it causes problems), the script ldpaths will set LD_LIBRARY_PATH to the R Lib path (in my case $R_HOME/lib:). The placement of the colon makes my system think that the directory "." is also on that lib path. This causes real problems when trying to run R

Hi there, I used to run R 2.10 on Ubunutu 10.04, and tried to install R 2.11 from the source at the same time.It seems that doing the second installation, I have messed up with some files or system paths, resulting in not being able to use either version of R on my system. I get the following message in terminal, whenever I try to run R now: /usr/local/bin/R: line 227:

Hello, I am having the following error while calling an R script through PHP. /usr/local/bin/R: line 227: /kk/Programs/R-2.13.0/etc/ldpaths: Permission denied ERROR: R_HOME ('/kk/Programs/R-2.13.0') not found I had compiled R from source and placed the generated R shell script in /usr/local/bin. Can you give me an insight of how to give permission to access the ldpaths file and why is

Has anyone successfully installed rJava on Debian squeeze (or any other version of linux)? I keep getting the ... (JDK) is missing or not registered in R error message when installing the package. I've tried running 'R CMD javareconf', setting JAVA_HOME and editing /etc/R/ldpaths by hand, but to no avail. The problem might be related to the R_JAVA_LD_LIBRARY_PATH that's

Full_Name: Jori M?ntysalo Version: 2.3.1 OS: Linux, GNU/Debian stable Submission from: (NULL) (81.197.171.182) I said ./configure --with-readline=no --with-x=no make make install and everything works except that /usr/local/lib/R/etc/ldpaths was not readable as normal user.

When i unpack R-devel_2010-01-05.tar.bz2 and run ./configure on two Linux machines, i get the error message configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile

$ R /usr/bin/R: line 238: /usr/lib64/R/etc/ldpaths: Permission denied $ rpm -q R R-3.2.3-2.fc23.x86_64 That /usr/bin/R#L238 is: . "${R_HOME}/etc${R_ARCH}/ldpaths" I noticed the error began bursting shortly after I ran dnf update. An excerpt from dnf's transaction logs: $ dnf history info <ID> Upgraded setroubleshoot-3.3.5-2.fc23.x86_64 @updates Upgrade

Hi all, I downloaded R-devel as explicited in https://developer.r-project.org/SVNtips.html Then, I tried to install it through instructions in https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installation (taking into account also https://stat.ethz.ch/pipermail/r-devel/2016-May/072777.html) So: export REPOS=https://svn.r-project.org/R export RTOP=~ #adjust as necessary cd $RTOP svn co

Dear R list people I loaded a file of numbers into R and got a dataframe of factors. So I tried to convert it to numeric as per the FAQ using as.numeric(). But I'm getting errors (please see example), so what am I getting wrong? Thanks for your time. John Example... #my data object > f GSM187153 GSM187154 GSM187155 GSM187156 GSM187157 GSM187158 GSM187159 13 7.199346 7.394519

Hi Everyone: Gavin's been so generous and patient that I figured I'd give him a break and send this snag to the list. When I do get this working, I will send an "How to build R from the tarball " instructions message to this list for posterity's sake ( and myself and anyone else who doesn't know how to build R from the tarball ). So, here's my latest snag: Gavin

Hi I'm trying to scale the point symbols on a 3d plot so that the ones at the front are larger than the ones at the back. I'm trying to give the image some perspective. Given this code... library(scatterplot3d) data=array(c(0,5,9), c(3,3)) scatterplot3d(data, pch=19, cex.symbols=10-data[,2], color=c("red","blue","black")); > data [,1] [,2] [,3]

On Wed, 20 Apr 2016 20:50:57 +0000 "Ellen K" <keyes at pushyes.xyz> wrote: > From: "Ellen K" <keyes at pushyes.xyz> > To: cireyapmin at gmail.com > Subject: RE: [R-sig-Fedora] Cannot Run On The Command Line > Date: Wed, 20 Apr 2016 20:50:57 +0000 > X-Mailer: iPad Mail (12H143) > > Hi virgo, > > Thank you for your interest in the

Hi Jeff!! I really don?t know if running R CMD javareconf with sudo has posed a problem here, now or in the past. What I know is sometimes it?s the only way to really config it, if I don?t run with sudo, in the end it asks me if I want to overwrite the configuration from root override rw-r--r-- root/admin for /usr/local/Cellar/r/3.4.4/lib/R/etc/Makeconf? (y/n [n]) y override rw-r--r--

Dear List, as I'm trying to install R and Rgraphwiz on a Fedora Linux, I have a problem with the environement variable "PKG_CONFIG_PATH". The library "libgvc" is not getting recognized / found, although a recent version libgvc is on the system and can be seen via /usr/lib64. I've tried to edit the paths described in /etc/ldpaths but without any success. Any hints how

No clue. Tip: R-devel is the mailing list for anything related to development versions of R. Off-topic here. On November 9, 2023 2:59:44 AM PST, "Iago Gin? V?zquez" <iago.gine at sjd.es> wrote: >Hi all, > >I downloaded R-devel as explicited in https://developer.r-project.org/SVNtips.html >Then, I tried to install it through instructions in