similar to: Assistance requested

This may be a tad O.T., but I have to ask somebody. In compiling WRF model, everything seems to build but at runtime, I get this error message: real.exe: /usr/pgi/linux86-64/6.0/lib/libpthread.so.0: version `GLIBC_2.3.3' not found (required by /lib64/tls/librt.so.1) There appears to be something missing from the library, but not being smart enough to know what each one provides, nor know

I am working on a SLES 10 cluster with R available on it. To better use my resources, I want to use Rmpi, but I am having a difficult time installing it. I have set the $R_LIBS variable correctly. The MPI libraries are available through the PGI compiler, but this R instance was compiled with GCC. The Rmpi package can be compiled and installed with %R CMD INSTALL Rmpi_0.5-5.tar.gz

Hi, Can anyone advise me on how to compile R with Portland Group compiler on a Opeteron machine with Red Hat Enterprise Linux WS release 4 installed? I've edit config.site file to pick portland group compilers instead of gcc. Here is the list of modified flags: CC=/usr/pgi/linux86-64/6.0/bin/pgcc CFLAGS='-g -O2' CPPFLAGS='-I/usr/pgi/linux86-64/6.0/include

I am trying to compile R-devel (R-devel_2006-05-17.tar.gz) on Red Hat Enterprise Linux AS release 3 (Taroon Update 7) using the Portland Group compiler 6.0. (I have not yet successful compiled R on this configuration, so I don't know if this is a new problem.) I get an error pgcc -L/usr/local/pgi/linux86-64/6.0/libso -L/usr/lib64 -o dftables dftables.o ../dftables chartables.h

Hi, I followed this message, https://stat.ethz.ch/pipermail/r-devel/2004-February/028942.html, to compile ATLAS with gcc and g77 on AMD Opteron. I then followed the instructions on this message, https://stat.ethz.ch/pipermail/r-devel/2004-February/028966.html, to convert static libraries to dynamic libraries. However, when I tried to configure R-devel, I got the following error

CentOS Errata and BugFix Advisory 2015:C001 Upstream details at : http://bugs.centos.org/view.php?id=8117 The following updated files have been uploaded and are currently syncing to the mirrors: ( sha256sum Filename ) i386: 6044ee7a7863e087a32391c31d94e030abf7d6d5d74dff8a6bd96cd32c5c63ca boost-1.41.0-25.el6.centos.i686.rpm bff46f66bdf08d7af49f2579070a2986489f4d0cf2fc50fbefb1db1bbf8b4b44

Hi, I built R with Portland Group compiler, but I noticed one thing that when I ran configure for the first time on AMD machine, I got the following error: checking whether the C compiler works... configure: error: cannot run C compiled programs. If you meant to cross compile, use `--host'. See `config.log' for more details. so I tried to set host=x86_64-unknown-linux-gnu,

Hello R-help! I am a systems administrator for the University of Southern California. I take care of it's general-purpose research cluster, and have recently been asked to provide access to a parallelized R platform. I do not have any previous experience using R, and have only ever had to do anything more then 'yum -y install R'. We have a myrinet MPI network, and use mpich1 as our

Hello everybody, I am trying to install Rmpi on 64-bit HP-Proliant server. I am facing the following error: * Installing *source* package 'Rmpi' ... Try to find mpi.h ... Found in /usr/local/mpich-1.2.7p1/include Try to find libmpi or libmpich ... Found libmpich in /usr/local/mpich-1.2.7p1/lib Try to find liblam ... checking for main in -llam... no liblam not found. Probably not LAM-MPI

Hi List, I'm trying to install aroma.affymetrix, which depend on many packages, affyio is one of them. The task is done on 32-bit Linux without problem. The same task was done on Solaris 9 with R-2.5.1 without problem. Following is the error message when installation affyio. I did try to put a file stdint.h I got from the web in the path, but got more error messages. Jun root@biostatsun1

Hello there, I'm checking if I can upgrade safely from CentOS6.5 to 6.6 using yum, and here's what it says: ===================== [snip] --> Finished Dependency Resolution --> Running transaction check ---> Package kernel.x86_64 0:2.6.32-431.23.3.el6.centos.plus will be erased ---> Package kernel-devel.x86_64 0:2.6.32-431.23.3.el6.centos.plus will be erased ---> Package

Send CentOS-announce mailing list submissions to centos-announce at centos.org To subscribe or unsubscribe via the World Wide Web, visit http://lists.centos.org/mailman/listinfo/centos-announce or, via email, send a message with subject or body 'help' to centos-announce-request at centos.org You can reach the person managing the list at centos-announce-owner at centos.org When

I've tried several times to get superOdoctor to run on this machine, and have had no luck yet. Aside from this error message, # superodoctor ***************************************************************************** Supero Doctor II - Linux version 2.24(060523) Copyright(c) 1993-2006 by Super Micro Computer, Inc. http://supermicro.com/

Hi everyone As I couldn't succeed with manual installation of Rmpi I decided to start again from the beginning. I removed R and MPICH in my Ubuntu Hardy installation. Then, to avoid any dependencies problems I have installed MPICH and R from synaptic, not from sources. But now I can't install Rmpi. An error message appears when trying to install Rmpi, you can find in

Hi All, While attempting to build R-patched using the Portland Group compiler suite on our dual Opteron 250 box running Scyld 29cz5 (based on RH, kernel 2.4.29), I get: make[5]: Leaving directory `/home/andy/Rbuild/R221-pgi/src/library/tools/src' make[5]: Entering directory `/home/andy/Rbuild/R221-pgi/src/library/tools/src' pgcc -I../../../../include -I/include -I/include/CC -fpic

Dear R-devel, [I'm not sure if this is appropriate for R-devel. If not, I'm more than happy to move it to R-help.] As those of you who saw my post on R-help know, I've been trying to build R-patched on a dual Opteron box running Scyld Beowulf, using the PGI 6.1 compilers. The build went fine, but I couldn't get it to pass make check-all. Jennifer Lai, who reported success with

Anyone have experience playing back a Webex wrf file on their CentOS 5.x system? I have a newly installed CentOS 5.4 i386 system and want to play such a file, but the Webex.com web site says it only supports Windows and MacOS for playback. Any other options next to creating a VM of Windows (I'm not buying a Mac for this). Thanks. Scott

This is a rather obscure question, I realize. I have written to the package author but have not heard back as of yet. I have read the README in the package, as well, but it didn't give me enough detail to diagnose the problems that I am having. (I did edit out the LAM-MPI check in zzz.R.in.) I am working to install Rmpi on top of MPICH on a beowulf cluster. Below is the output of the

Hi, I'm trying to plot a field obtained from the atmospheric model WRF-NMM which uses a "Rotated Lat-Lon? map projection. The WRF documentation mentions that: ? Rotates the earth's lat/lon grid such that the intersection of the equator and prime meridian is at the center of the model domain. ? Within the rotated framework the grid spacing is constant, but in an earth-relative

es simple lo unico que tienes que hacer es instalar la libreria(xlsReadWrite) y direccionar y seguidamente especificar el numero de hoja de excel library(xlsReadWrite) dat.excel <- read.xls("d:/ruta del archivo/doc.xls", sheet=1) espero que te sirva ------------------------------------------ El día 18 de agosto de 2010 06:00, <r-help-es-request en r-project.org>