similar to: Trouble with ISOLINUX and IDE bus resets.

Hello!!! I have a question about clustering. I'll present my problem first. I have a simulation of a protein trayectory (a file with a time series of protein 3D-coordinates), from it I can calculate the Root Mean Square desviation (RMSD) beetween any pair of structures in the trayectory, which is a rough idea of 3D similarity beetween them. If for every conformation (trayectory frame) I

Hi R users This is not related to R but general stats terms. I f any one help me to figure out how they differ and when I need to use which one, i will appreciate it. I read several simulation studies and found that RMSE (Root Mean Square Error) and RMSD (Root Mean Square Difference) appered to be used interchangeablely. The formula for calculating for both RMSE and RMSD are, to me, the

Hi everybody, I'm trying to create a script that picks a txt file with 2 columns of coordinates (depth and variable1) and automatically tries to fit several polynomial with the function nls(). After that, it creates a list of observed, predict, residuals and other, and then it calculates AIC, RMSD, MAD and R^2. At the end of the script I create a series of vectors with MAD for all

Hi everyone, I have two matrices of 2000x2000 size. They consist of a measurement of RMSD deviations of a protein structure. The basic question i want to answer is the following: are there a significant differences between the two matrices? I aim to use the Mantel test. I don't really know if this is a good idea or if there are better solutions for these mega matrices. Thanks [[alternative

Using Trellis, am successfully setting up a number of panels (25) in which I have two box and violin plots. I would like to colour - one plot as RED and the other as BLUE (in each panel). I can do that with the box plots, but the violin density areas just take on one colour. My basic call is as follows: bwplot(rmsd ~ file | code, data=spread_data.filtered, panel = function(...,

Hello, I am working on a legacy BIOS extension that is used to provide a centralised and managed boot process for a secure environment. Due to an assortment of reasons the access to hard disk / CD-ROM devices has had to be implemented at a low level (reading/writing IDE controller registers) rather than relying on the int 13h services provided by the system BIOS. Booting hard disks is working

hi, i've been trying around for a month or so to get isolinux on my toshiba satellite 4010cdt running. It doesn't really work. The debug version says the following: ISOLINUX 1.75 2002-06-14 ... isolinux: Startinug up, DL = 82 isolinux: Loaded spec packed OK, drive = 82 and that's it. No boot there. If I chain-load (or however that's called) my Isolinux - CDs with "Smart

Hi, I have a PHILIPS CD-RW/DVD-ROM SCB5265 and I have problems reading of some DVDs. I found two different firmware updates which contains .exe files: TD17 (5/1/2007): http://ftp.us.dell.com/rmsd/PHILIPS-SCB5265-TD17.zip TD19 (12/13/2005): http://ftp.us.dell.com/rmsd/SCB5265_fwTD19.zip If I set up the IDE SCSI emulation, the firmware updater can recognize my CD-RW/DVD-ROM drive. # rmmod ide-cd

I am experiencing a problem booting a machine with ISOLINUX on a machine that has no hard drive (CD-ROM only). I've tried two different machines, a Dell Poweredge 2600 and a Dell Poweredge 1300, both exhibit identical symptoms. When I boot the exact same cd on a system with a hard drive, the boot is just fine. I had been using ISOLINUX 1.66, but I just upgraded to 2.02 and I am having the

Hi, Standard correlations (Pearson's, Spearman's, Kendall's Tau) do not accurately reflect how closely the model (GAM) fits the data. I was told that the accuracy of the correlation can be improved using a root mean square deviation (RMSD) calculation on binned data. For example, let 'o' be the real, observed data and 'm' be the model data. I believe I can calculate

Whilst looking at the 3.61 isolinux.asm file I noticed that the code uses a spec buffer size of 13h for the initial BIOS call with the drive number passed in in DL. It then uses a spec buffer size of 13 when scanning drive numbers from FFh to 81h Line 291 is mov byte [spec_packet],13h Lines 576 to 577 are mov si,spec_packet mov byte [si],13

Is there a mix of SYSLINUX and ISOLINUX that can boot an ISO image from a FAT file system? Sort of like MEMDISK but doesn't need to load the entire great-big ISO into RAM or install an int-13 driver? SYSLINUX would need to be installed on the FAT file system but it would want to chain-load ISOLINUX as installed on the ISO. ISOLINUX would load it's blocks from the ISO file in the FAT

(Sorry, Outlook webmail prohibits me from proper replying/quoting) >it has the nice effect that you can load the El Torito >CD-ROM driver. Which seems logical if you boot a kernel (like Linux, or Memdisk with an imagefile), but not when doing a local boot (diskette/harddisk) In other words: boot from cdrom, and if you then load a disk-image, eltorito.sys should load. If not loading a

Dell has an ISO image (Dell version 5061A0, A5061) available here http://support.euro.dell.com/support/downloads/download.aspx?releaseid=R102625&fileid=132637 which contains an ISO with an hard disk image and no-emulation boot. I've estracted the hard disk image (size=2048000) and I'd like to boot it with isolinux. I tried kernel memdisk append initrd=dell5061.img The Dell/Dos os

This patch will improve the flow at disk_write_sectors and disk_read_sectors significantly, but it *will* introduce bugs if either of the above functions gets called before disk_get_params. --- com32/include/syslinux/disk.h | 21 +++++ com32/lib/syslinux/disk.c | 170 +++++++++++++++++++++-------------------- 2 files changed, 108 insertions(+), 83 deletions(-) diff --git

This set of patches add some support for sector size >512. Currently it fixes extlinux, MBR for GPT and ext partitions. Other code is unaffected. This set of patches has been tested on a read Dell machine running a beta firmware.

I'm running into some issues with regard to isolinux and memdisk, and am not sure where to ask/look in the best way possible. These are DOS-related issues. So here goes: * Can MEMDISK map a imagefile (compressed? harddisk?) to more than (and/or beyond) 4GB of memory? Say you'd have 8/16GBGB and want 4GB available to the user so might as well use the other 4/12GB for MEMDISK. Or max

syslinux-1.75 We have many legacy boot disks (setup for nics, scsi adapters, ...) and I'm trying to put all of them on 1 CD which would ask the user "which floppy image you want to boot?" I'm using isolinux. I've a problem with the winxp boot floppy made as per: http://support.microsoft.com/directory/article.asp?ID=KB;EN-US;Q305595 (format a: and then cp ntldr

I am trying to install Debian Linux on an an old Intel Classic R+ computer that uses an internal Yamaha SCSI CD writer model CRW8424S connected to an Adaptec ISA SCSI card (I think its a 1542CP). The CD writer is is the only device connected to the SCSI card. The computer has one hard drive connected to the on-board IDE interface, a 1.44MB 3 1/2 inch floppy and a 1.2MB 5 1/4 inch floppy. The hard

Hello, the following patches should get multidisk access working. The syntax accepted is the following: (hdx,y)/path/to/file where x is the disk number and start at 0 and the y is the partition number starting at 1. So (hd0,1) is the first partition of the first disk. the other accepted syntax is using MBR's 32 bits disk signature so for example: (mbr:0x12345678,2)/foo/bar would address