similar to: glmmBUGS fails to accept higher level covariates

Displaying 20 results from an estimated 100 matches similar to: "glmmBUGS fails to accept higher level covariates"

2011 Jun 27
0
OpenBUGS and glmmBUGS package
Dear All, I am trying to use the glmmBUGS package with OpenBUGS under Linux. Here is a short list of code I modified from the diseasemapping package document: ---------------------------------------- library(diseasemapping) data(popdata) data(casedata) model = getRates(casedata, popdata, ~age*sex, breaks=seq(0, 90, by=10) ) ontario = getSMR(popdata,model, casedata) spplot(ontario,
2009 Feb 08
5
glmmBUGS: logistic regression on proportional data
Hello, I am trying to run a logistic regression with random effects on proportional data in glmmBUGS. I am a newcomer to this package, and wondered if anyone could help me specify the model correctly. I am trying to specify the response variable, /yseed/, as # of successes out of total observations... but I suspect that given the error below, that is not correct. Also, Newsect should be a
2008 Aug 06
3
Help in running Stata dataset in R
Dear All, I installed R 2.7.0 and tried to call a dataset i had ealier own called on R2.6.2 but i keep on getting an error: use("maltreat.dta") Error in fromchar(x) : character string is not in a standard unambiguous format Tried doing the same with R2.7.1 but i get the same error. However if i call the same on R 2.6.2, there is no error: use("maltreat.dta") > des()
2019 Oct 28
0
[PATCH v2 02/15] mm/mmu_notifier: add an interval tree notifier
From: Jason Gunthorpe <jgg at mellanox.com> Of the 13 users of mmu_notifiers, 8 of them use only invalidate_range_start/end() and immediately intersect the mmu_notifier_range with some kind of internal list of VAs. 4 use an interval tree (i915_gem, radeon_mn, umem_odp, hfi1). 4 use a linked list of some kind (scif_dma, vhost, gntdev, hmm) And the remaining 5 either don't use
2019 Nov 07
0
[PATCH v2 02/15] mm/mmu_notifier: add an interval tree notifier
On Wed, Nov 06, 2019 at 04:23:21PM -0800, John Hubbard wrote: > On 10/28/19 1:10 PM, Jason Gunthorpe wrote: [...] > > /** > > * enum mmu_notifier_event - reason for the mmu notifier callback > > @@ -32,6 +34,9 @@ struct mmu_notifier_range; > > * access flags). User should soft dirty the page in the end callback to make > > * sure that anyone relying on
2019 Nov 07
1
[PATCH v2 02/15] mm/mmu_notifier: add an interval tree notifier
On Wed, Nov 06, 2019 at 04:23:21PM -0800, John Hubbard wrote: > Nice design, I love the seq foundation! So far, I'm not able to spot anything > actually wrong with the implementation, sorry about that. Alas :( I feel there must be a bug in here still, but onwards! One of the main sad points was it didn't make sense to use the existing seqlock/seqcount primitives as they have
2019 Nov 07
0
[PATCH v2 02/15] mm/mmu_notifier: add an interval tree notifier
On 11/7/19 12:06 PM, Jason Gunthorpe wrote: ... >> >> Also, it is best moved down to be next to the new MNR structs, so that all the >> MNR stuff is in one group. > > I agree with Jerome, this enum is part of the 'struct > mmu_notifier_range' (ie the description of the invalidation) and it > doesn't really matter that only these new notifiers can be
2007 Jul 25
1
v1.1 alpha1: can't pop/imap login with LDAP
Hi, We recentlty upgraded our dovecot from v1.0.2 to v1.1ahpha1 under CentOS 4.4. Also, we are using Postfix 2.4.3 and OpenLDAP 2.3.35. We've been using LDAP for our POP/IAMP user authentication, however after upgrading to v1.1alpha1, LDAP authentication does't seem to be working properly. We re-examined the source code, and made a few modification. We are suspecting that... (1)
2013 Jan 18
0
problem that arises after using the new version of "BRugs"
Respected Sir, With reference to my mail to you and the reply mail by you dated 9th and 16th January, 2013, I am sending the reproducible code in the attached document named " MODIFIED ANS ". I am also attaching the txt file named "hazModel", which is required to save in my documents folder to run the program. The file also contains the error message
2019 Nov 08
0
[PATCH v2 02/15] mm/mmu_notifier: add an interval tree notifier
On Thu, Nov 07, 2019 at 09:00:34PM -0500, Jerome Glisse wrote: > On Fri, Nov 08, 2019 at 12:32:25AM +0000, Jason Gunthorpe wrote: > > On Thu, Nov 07, 2019 at 04:04:08PM -0500, Jerome Glisse wrote: > > > On Thu, Nov 07, 2019 at 08:11:06PM +0000, Jason Gunthorpe wrote: > > > > On Wed, Nov 06, 2019 at 09:08:07PM -0500, Jerome Glisse wrote: > > > > > >
2019 Nov 08
0
[PATCH v2 02/15] mm/mmu_notifier: add an interval tree notifier
On Fri, Nov 08, 2019 at 12:32:25AM +0000, Jason Gunthorpe wrote: > On Thu, Nov 07, 2019 at 04:04:08PM -0500, Jerome Glisse wrote: > > On Thu, Nov 07, 2019 at 08:11:06PM +0000, Jason Gunthorpe wrote: > > > On Wed, Nov 06, 2019 at 09:08:07PM -0500, Jerome Glisse wrote: > > > > > > > > > > > > > Extra credit: IMHO, this clearly deserves to
2011 Feb 02
2
Indexing from two variables
Hello, thank you all for your patience and time I am essentially trying to get disorganised data into long form for linear modelling. I have 2 dataframes "rec" and "book" Each row in "book" needs to be pasted onto the end of several of the rows of "rec" according to two variables in the row:" MRN" and "COURSE" which match. I have
2019 Nov 07
2
[PATCH v2 02/15] mm/mmu_notifier: add an interval tree notifier
On Wed, Nov 06, 2019 at 09:08:07PM -0500, Jerome Glisse wrote: > > > > Extra credit: IMHO, this clearly deserves to all be in a new mmu_range_notifier.h > > header file, but I know that's extra work. Maybe later as a follow-up patch, > > if anyone has the time. > > The range notifier should get the event too, it would be a waste, i think it is > an oversight
2019 Nov 07
5
[PATCH v2 02/15] mm/mmu_notifier: add an interval tree notifier
On 10/28/19 1:10 PM, Jason Gunthorpe wrote: ... > include/linux/mmu_notifier.h | 98 +++++++ > mm/Kconfig | 1 + > mm/mmu_notifier.c | 533 +++++++++++++++++++++++++++++++++-- > 3 files changed, 607 insertions(+), 25 deletions(-) > > diff --git a/include/linux/mmu_notifier.h b/include/linux/mmu_notifier.h > index 12bd603d318ce7..51b92ba013ddce
2012 Aug 08
1
basehaz() in package 'Survival' and warnings() with coxph
Hello, I have a couple of questions with regards to fitting a coxph model to a data set in R: I have a very large dataset and wanted to get the baseline hazard using the basehaz() function in the package : 'survival'. If I use all the covariates then the output from basehaz(fit), where fit is a model fit using coxph(), gives 507 unique values for the time and the corresponding cumulative
2015 Mar 24
3
NetCDF
Buenas tardes, pido disculpas si mi consulta es demasiado elemental, pero actualmente encuentro una gran barrera para continuar mi trabajo si no lo solvento. Soy usuaria principiante de R, estoy trabajando con una base de datos climática <https://digital.csic.es/handle/10261/104742>que se encuentra en formato netcdf4 y necesito transformarla a la versión 3 con el fin de visualizarlo en un
2012 Aug 09
1
basehaz() in package survival and warnings with coxph
I've never seen this, and have no idea how to reproduce it. For resloution you are going to have to give me a working example of the failure. Also, per the posting guide, what is your sessionInfo()? Terry Therneau On 08/09/2012 04:11 AM, r-help-request at r-project.org wrote: > I have a couple of questions with regards to fitting a coxph model to a data > set in R: > > I have a
2019 Nov 07
0
[PATCH v2 02/15] mm/mmu_notifier: add an interval tree notifier
On Thu, Nov 07, 2019 at 08:11:06PM +0000, Jason Gunthorpe wrote: > On Wed, Nov 06, 2019 at 09:08:07PM -0500, Jerome Glisse wrote: > > > > > > > Extra credit: IMHO, this clearly deserves to all be in a new mmu_range_notifier.h > > > header file, but I know that's extra work. Maybe later as a follow-up patch, > > > if anyone has the time. > >
2011 Jul 01
3
Multilevel Survival Analysis - Cox PH Model
Hello all, thanks for your time and patience. I'm looking for a method in R to analyse the following data: Time to waking after anaesthetic for medical procedures repeated on the same individual. > str(mysurv) labelled [1:740, 1:2] 20 20 15 20 30+ 40+ 50 30 15 10 ... - attr(*, "dimnames")=List of 2 ..$ : NULL ..$ : chr [1:2] "time" "status" -
2002 Nov 20
0
Plots by subject
Thomas, Thank you for your reply about the for () loop. The as.character advice worked. Sorry for the delay in getting back to?I had to set the project aside for a few weeks. This didn?t work exactly as is for (patient in as.character(1:n)){ pt <- MRN == patient (rest of the function) } But this did for (patient in as.character(levels(MRN))){ pt <- MRN == patient (rest of the function)