similar to: Consistant test for NAs in a factor when exclude = NULL?

I have a data set like this in one .txt file (cols separated by !): APE!KKU!684! APE!VAL!! APE!UASU!! APE!PLA!1! APE!E!10! APE!TPVA!17122009! APE!STAP!1! GG!KK!KK! APE!KKU!684! APE!VAL!! APE!UASU!! APE!PLA!1! APE!E!10! APE!TPVA!17122009! APE!STAP!1! GG!KK!KK! APE!KKU!684! APE!VAL!! APE!UASU!! APE!PLA!1! APE!E!10! APE!TPVA!17122009! APE!STAP!1! GG!KK!KK! it contains over 14 000 000 records. Now

Dear List, I am writing a paper in Hungarian, that I Sweave and than pdfLaTeX. Everything is fine, except for two accented letters in the graphs that behave strange, though on the screen and in eps exports they look perfect. The problem is that I need pdf graphs, since I would like to have a PDF after LaTeX-ing. For the example below I downloaded the following two font sets: 1. Latin Modern

Using str() in a function. I am in the early phase of learning R, and I find I spend a lot of time trying to figure out what is actually in objects I have created or read in from a file. I'm trying to make a simple little function to display a couple of things about a object, let's say the summary() and the str(), sequentially, preferably without a bunch of surplus lines between them. I

Hi, batch is a vector of lines returned by readLines from a NL-line-terminated file, here is the relevant section: ========================================================= AA BB CC DD EE FF GG H H JJ KK LL MM ========================================================= as you can see, a line is corrupt; two CRLF's are inserted. This is okay, I drop the bad lines, at least I hope I do:

Hello, If I have a dataframe: example(data.frame) zz<-c("aa_bb","bb_cc","cc_dd","dd_ee","ee_ff","ff_gg","gg_hh","ii_jj","jj_kk","kk_ll") ddd <- cbind(dd, group = zz) and I want to divide the column named group by the "_", how would I do this? so instead of the first row being x

Hi, You should look at Pinheiro and Bates (2000) Mixed-effects models in S and S-Plus. It describes how to format the correlation matrix to pass to functions lme and gls. Basically, the correlation matrix has to be one of the corStruct classes, probably corSymm for your example. So in the call to lme (or gls if you really have no random effects), use something like:

Hi, I am puzzled with serialize(). It comes down generating identical hash codes for (apparently) identical objects using digest::digest(), which in turn relies on serialize(). Here is an example illustration the issue: ser <- function(object, ...) { list( names = names(object), namesRaw = charToRaw(names(object)), ser = serialize(names(object), connection=NULL, ascii=FALSE)

hi, is there any wait function in R. I am running one R script to plot many graphs it is in the for loop. its showing no error but its not plotting well I think i can solve this problem with a wait function. Please help me in this regards. If u need any clarification about programme. u can find the script below. best regards, Deepak.M.R Biocomputing Group University of Bologana. #!/usr/bin/R

Dear all, I am stuck at applying loop function for creating separated plots. I have coding like below: dataset.table <- table(data.frame(var1=c(1,2,3,1,2,3,1),colour=c("a","b","c","c","a","b","b") )) kk = function(f) { ls=as.character(f) pie(dataset.table[ls,],main=ls)

This came up on r-help but indicates a bug. dnbinom(x,n,p) calls dbinom_raw(n-1,...) which returns 0 for n<1. -thomas ---------- Forwarded message ---------- Date: Thu, 08 Feb 2001 17:10:23 +0000 From: Yudi Pawitan <yudi@stat.ucc.ie> To: Mark Myatt <mark@myatt.demon.co.uk> Cc: R-Help <r-help@stat.math.ethz.ch> Subject: Re: [R] Goodness of fit to Poisson / NegBinomial

Hello, how to merge a data.frame and a matrix by one column in the data.frame and rownames of the matrix? df <- data.frame(col1=c("kk","yy","kk"),col2=c(6,4,3)) > df   col1 col2 1   kk    6 2   yy    4 3   kk    3 m<-matrix(c(3,8,56,9), nrow=2, dimnames = list(c("aa","kk"),c("col1","col2"))) > m    col1 col2 aa   

Dear all, I am dealing with the following (apparently simple problem): For some reasons I am interested in passing variables from a dataframe to a specific environment, and in fitting a standard glm: dati<-data.frame(y=rnorm(10),x1=runif(10),x2=runif(10)) KK<-new.env() for(i in 1:ncol(dati)) assign(names(dati[i]),dati[[i]],envir=KK) #Now the following two lines work correctly:

I've redirected this reply from r-help to the bugs list. On 11/3/2006 8:25 AM, vito muggeo wrote: > Dear all, > I am dealing with the following (apparently simple problem): > For some reasons I am interested in passing variables from a dataframe > to a specific environment, and in fitting a standard glm: > > dati<-data.frame(y=rnorm(10),x1=runif(10),x2=runif(10)) >

Hi, I've spotted a possible memory leakage/violation in the latest R v2.1.1 patched and R v2.2.0dev on Windows XP Pro SP2 Eng. I first caught it deep down in a nested svd algorithm when subtracting a double 'c' from a integer vector 'a' where both had finite values but when assigning 'a <- a - c' would report NaNs whereas (a-c) alone would not. Different runs

hi My workstation: win98, SuSE 8.2, wine-20030618 My (german) keyboard is accept with win98 : as 101/102 key or Microsoft layout, with SuSE : as PC105 nodeadkeys, with wine : look here - - -snip - fixme:keyboard:X11DRV_KEYBOARD_DetectLayout Your keyboard layout was not found! Using closest match instead (German keyboard layout without dead keys) for scancode mapping. Please define your

Dear mailing list I have a data that have 20,000 rows and 20 columns. Io wonted to extract the 10th row only. Example the 10th, 20th, 30th 40th…..20000 th. can you please help me how do I do that.Than kyou. Example is below. Inpute: AG GG GG AG CC CC CC CC CT CC CT CT GG GG GG GG CC CC CC CC GG GG GG GG CC CC CC CC GG CG CG GG GG GG GG GG *CC CC CC CC* AA AG AG AA AA AA AA AA GG AG AG GG GG AG AG

Hi there, I am trying to understand how AliasAnalysis works out in LLVM. I used the following simple test-case (test4.c): -- void test() { int *jj, *kk; int aa = 100; jj = &aa; *jj = 300; } int main() { test(); return 0; } -- Then I did "llvm-gcc -emit-llvm -c -o test4.bc test4.c" to get bc. I tried the following 2 ways to get what I expect to get as

Hello all: I don't know what I'm doing bad, but --link-dest does not work for me: I have three directories, the original one, the first copy and the second copy I want to populate: $ ls -li total 12 1761433 drwxr-xr-x 2 envite envite 4096 dic 10 14:04 copy1 1761434 drwxr-xr-x 2 envite envite 4096 dic 11 01:18 copy2 1761432 drwxr-xr-x 2 envite envite 4096 dic 10 14:04 origin $ ls -li *

Dear All I have a data.frame like that: structure(list(name = c("Gga_rs10722041", "Gga_rs10722249", "Gga_rs10722565", "Gga_rs10723082", "Gga_rs10723993", "Gga_rs10724555", "Gga_rs10726238", "Gga_rs10726461", "Gga_rs10726774", "Gga_rs10726967", "Gga_rs10727581", "Gga_rs10728004",

Hi, When validating users on my Linux system against an ActiveDirectory, the Windows event log are filled with messages like these (Windows Event ID 675): Pre-authentication failed: User Name: linux$ User ID: KK\linux$ Service Name: krbtgt/KK.LOCAL Pre-Authentication Type: 0x0 Failure Code: 0x19 Client