similar to: linking options -lblas

I have R under Linux Kubuntu Hardy Heron 8.04 LTS. I am trying to install package 'lme4' and get the following error: ---- * installing *source* package ?lme4? ... ** libs gcc -std=gnu99 -I/usr/share/R/include -I/usr/share/R/include -I"/usr/lib/R/library/Matrix/include" -I"/usr/lib/R/library/stats/include" -fpic -g -O2 -c init.c -o init.o gcc -std=gnu99

Hi, I am trying to install gee on our server but I get the error below. I do not have root on this machine so no control on how R was installed itself. It looks like it cannot find blas libs, the only ones i can find on the machine are: /usr/lib64/libblas.so.3 -> libblas.so.3.0.3 /usr/lib64/libblas.so.3.0 -> libblas.so.3.0.3 /usr/lib64/libblas.so.3.0.3 and : $ R CMD config BLAS_LIBS

Dear All, I am building R from source[1], following what is done in "rules" for building Debian's R. But the R I generate, in contrast to the standard Debian's R, will not change the BLAS and LAPACK libraries it uses when I change them via "update-alternatives". I have no idea what I am doing wrong (but, somehow, I've been quite capable of making the same

Agustin, posted on R-help. I think the problem is one of the debian/ubuntu package 'r-cran-robustbase' and its setup or (missing?) dependencies. I can confirm Agustin's problem, working on Ubuntu 8.04.2 (8.04 is a "LTS" = long time support version). apt-get install r-cran-robustbase works fine, but when trying to load the package, there's a DLL - dependency on

hi all, Am new to R. I am having problems installing Bioconductor package in R on fedora core 4 running on AMD64 bit machine. this is the error message I get : gcc -shared -L/usr/local/lib -o affyPLM.so avg_log.o biweight.o chipbackground.o common_types.o do_PLMrlm.o do_PLMrma.o do_PLMthreestep.o idealmismatch.o LESN.o lm.o lm_threestep.o log_avg.o matrix_functions.o

Hi, After loading R 4.0.0 on Ubuntu 20.04. R version 4.0.0 (2020-04-24) -- "Arbor Day" Copyright (C) 2020 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()'

Just in case anyone cares or is hitting the same problem: to install current mgcv (1.0-5) on 1.9.0 on Knoppix/Debian unstable I had to: # cd /usr/lib # ln -s /usr/lib/atlas/libblas.so.3 libblas-3.so # ln -s /usr/lib/atlas/liblapack.so.3 liblapack-3.so Otherwise compilation couldn't find -lblas-3 or -llapack-3 (I could have gotten away with the links in /usr/lib/atlas instead of /usr/lib,

Dear lists: I could not calculate what is wrong with my installing. Could you help me to find the solution? Thanks. Following are the installing screen massages: install.packages("demography") 将程序包安装入‘/home/zzk/R/i686-pc-linux-gnu-library/2.12’ (因为‘lib’没有被指定) --- 在此連線階段时请选用CRAN的鏡子 --- 载入Tcl/Tk接口... 完成 also installing the dependencies ‘akima’, ‘rgl’, ‘misc3d’, ‘quadprog’, ‘zoo’, ‘locfit’,

Subject: Re: [R-sig-Debian] ubuntu problem with 'r-cran-robustbase' [FWD Agustin Lobo] Date: Tue, 12 May 2009 13:30:49 +0200 From: Agustin Lobo <aloboaleu at gmail.com> Reply-To: aloboaleu at gmail.com To: Dirk Eddelbuettel <edd at debian.org> CC: Martin Maechler <maechler at stat.math.ethz.ch>, R-SIG-Debian at stat.math.ethz.ch References: <18953.17704.527898.355877

This is really odd, I've installed the binary of robustbase through synaptic on an ubuntu 8.04 machine and get: > library(robustbase) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared library '/usr/lib/R/site-library/robustbase/libs/robustbase.so': libRlapack.so: cannot open shared object file: No such file or directory Error: package/namespace load

Hello, In a nutshell, I've got a data.frame like this: > assignation <- data.frame(value=c(6.5,7.5,8.5,12.0),class=c(1,3,5,2)) > assignation value class 1 6.5 1 2 7.5 3 3 8.5 5 4 12.0 2 > and a long vector of classes like this: > x <- c(1,1,2,7,6,5,4,3,2,2,2...) And would like to obtain a vector of length = length(x), with the corresponding

Hello, I've got a data.frame like this: > > assignation <- data.frame(value=c(6.5,7.5,8.5,12.0),class=c(1,3,5,2)) > > assignation > value class 1 6.5 1 2 7.5 3 3 8.5 5 4 12.0 2 > > > and a long vector of classes like this: > > x <- c(1,1,2,7,6,5,4,3,2,2,2...) > And would like to obtain a vector of length =

I am attaching a patch to R-0.63's configure.in file which will enable R to detect and use some special math libraries on linuxppc and mklinux. The patch provides tests for these libraries and enable/disable switches for them as well. One library is the libmoto math library which must be used in conjunction with libm (it only replaces some of libm's functions). The other is a RISC

I am attaching a patch to R-0.63's configure.in file which will enable R to detect and use some special math libraries on linuxppc and mklinux. The patch provides tests for these libraries and enable/disable switches for them as well. One library is the libmoto math library which must be used in conjunction with libm (it only replaces some of libm's functions). The other is a RISC

Hi, Is there a way to know which library is giving a warning? Specifically, I'm getting a set of warnings: "Too many open raster files" Thanks and best wishes, -- Javier Garc?a-Pintado Institute of Earth Sciences Jaume Almera (CSIC) Lluis Sole Sabaris s/n, 08028 Barcelona Phone: +34 934095410 Fax: +34 934110012 e-mail:jgarcia at ija.csic.es

Dear list, I'm forwarding these 2 messages as suggested by the package developer. My system is > sessionInfo() R version 2.9.0 (2009-04-17) i486-pc-linux-gnu on Ubuntu 8.04, with r-base-core, r-base-dev and r-recommended installed from binaries through Synaptic. I normally install the rest of packages using install.packages() from within R (started from an xterminal by su) Agus

Hi, I'm trying to use expression() to write a text to a graphic in the margin. Using: mtext(expression(beta),side=1,line=2) writes a perfect beta greek character, but I need to add a subindex "max", and I'm trying: mtext(paste(expression(beta),"max"),side=1,line=2) simply writes "beta max" in the plot. Please, Could you tell me what I'm doing wrong?

Hi all, Let's say I have a long data frame and a short one, both with three colums: $east, $north, $value And I need to fill in the short$value, extracting the corresponding value from long$value, for coinciding $east and $north in both tables. I know the possibility: for (i in 1:length(short$value)){ short$value[i] <- long$value[long$east==short$east & long$north==short$north] } How

This should be theoretically very simple, but I dont get the elegant answer (without looping). I've got a long (thousands of rows) data frame: > E.coor[1:10,] east north dat 1 582650 4248850 0.8316848 2 582750 4248850 0.7230272 3 582850 4248850 0.3250818 4 582950 4248850 0.6144006 5 583050 4248850 0.8706312 6 583150 4248850 0.2149651 7 583250 4248850 0.1659519 8

Hello, A brief question that I am not able to resolve by my own, but I presume it's easy for you: I've used apply to find the values closer to 0 in each row of a matrix: closer.to.0 <- apply(abs(myarray),MARGIN=1,"min") My question is how could I use which (or another way) to obtain a vector that indicates which columns contains these "closer to 0" values? (I