similar to: R CMD check

hello, I'd like know how to sort a data frame in R for example how I should do to sort by Catholic with swiss data frame like below thanks Fertility Agriculture Examination Education Catholic Infant.Mortality Courtelary 80.2 17.0 15 12 9.96 22.2 Delemont 83.1 45.1 6 9 84.84 22.2

I can never remember how to use "order" to sort the rows of a data frame, so like any good, lazy programmer, I decided to write my own function. The idea is to specify a data.frame and a one-sided formula with +/- indicating ascending/descending. For example: sort.data.frame(~ +nitro -Variety, Oats) Since sorting of a data.frame is an oft-asked question on this list, I am posting

Hello List Dwellers: I?ve looked around quite a bit, but don?t quite see an answer that I understand. I?m looking for a way to take any kind of color specification (rgb, hsv, hcl, hex) and match it to the n-nearest R official color names. Clearly it is easy to interconvert different specification schemes and color spaces, but matching to the name seems a bit trickier. Seems like if one has a

All, I have used package.skeleton, edited the .Rd files and the DESCRIPTON file. In one of my package functions I am using RODBC so I have a line of code that reads: require(RODBC). In my DESCRIPTION file I have the following relevant line: Depends: R (>= 2.9.0), RODBC However, when I do a check (Rcmd check my_package_name) I get this warning: * checking for unstated dependencies in R code

Hello, I have a workspace that contains a number of functions I want to put in a library. Under R 1.9.0 I did this fairly easily by putting them in a R folder, creating a DESCRIPTION & TITLE file etc. I could then load my library successfully. Under R 2.0.0 this simple process apparently no longer works. I have used package.skeleton() and have run R CMD INSTALL pkgname but still get various

*Synopsis*: "set once" / "create time only" properties can''t be set for pool level dataset Due to a change requested by <User 1-5Q-12446>, <User 1-5Q-12446> is now the responsible engineer for: CR 6647661 changed on Jan 7 2008 by <User 1-5Q-12446> === Field ============ === New Value ============= === Old Value ============= Responsible Engineer

*Synopsis*: "set once" / "create time only" properties can''t be set for pool level dataset CR 6647661 changed on Apr 15 2009 by <User 1-ERV-6> === Field ============ === New Value ============= === Old Value ============= See Also 6828754 ====================== ===========================

Hello, I am running a simple nls model (which a friend ran OK) but I get the following error: Error in nls(y ~ R * (1 - (x/K)^2), data = nls.dat, start = list(R = 0.3, : object 'R_nls_iter' not found Does anyone know what the 'R_nls_iter' error is? The data are: x=1:8 ; y=c(14,19,25,34,43,56,69,76) # starting values: R=.3, K=94 Thanks in advance. Jeff

Hi, I have a contour plot and I want to shade a polygon (the area below a line) but the polygon shading wipes out the contour lines. Does anybody know how to shade the polygon and still see the contour lines? Thanks. Jeff

Dear All, I want to compare formulas resulting from using stepAIC() on glm() objects. I have 2 different formulas, say F1 and F2, which consist of about 10 factors (Y~A+B+C+...) but one has an interaction term (A:B) while the other doesn't. But when I perform F1==F2 it comes back as TRUE. Is there a proper way to compare formulas? ------------------------------------------- Jeffrey M

Hello, I want to plot 3 boxplots [ par(mfrow=c(3,1)) ] but the first one has 8 groups, the 2nd has 7 and the third has 6. But I the groups to line up: 1 2 3 4 5 6 7 8 2 3 4 5 6 7 8 3 4 5 6 7 8 where the numbers actually refer to years. I suspect I have to manipulate the function bxp(). Is there a relatively simple way to do this? Thanks for any help. Jeff Breiwick NMFS, Seattle

Hi, I am trying to run the command: R CMD INSTALL -l mypath mypackagename from within R (Windows XP) using system() and get the following error: ARGUMENT 'CMD INSTALL -l D:/R/JMB.LIBS jmb.test' __ignored__ Fatal error: you must specify '--save', '--no-save' or '--vanilla' My function contains these 3 lines: setwd("D:/R/R.pkgs") # path to files set

Hello, When I run R CMD build --binary pkgname I get * checking for file 'pkgname/DESCRIPTION' ... OK * preparing 'pkgname': * checking DESCRIPTION meta-information ... OK * cleaning src * removing junk files * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building binary distribution * installing *source* package

No, I do not get the same as you. I have tested with R-devel and R-patched compiled today. When I do R CMD Rd2pdf mpra I get (as reported a few days ago) Hmm ... looks like a package Converting Rd files to LaTeX Error : mpra/man/mpra-package.Rd:6: file './DESCRIPTION' does not exist whereas you (Kurt) reports that this works on zTree. When I do R CMD Rd2pdf mpra/man I get - a

Hello, I have a beginner's Q: if i want to know all the functions provided by a package, what is command for that? in another word, Is there a command to list all the commands available in a packege? thanks a lot, yan

Full_Name: Byron Ellis Version: R 1.9.0 (and 2.0.0) OS: Linux (Redhat Fedora Core) Submission from: (NULL) (140.247.241.197) It appears that `R CMD build` cannot handle spaces in the path when building packages for distribution. For instance: [ellis@net-78815 ~/Bayesian Networks]$ R CMD build bnsl * checking for file 'bnsl/DESCRIPTION' ... OK * preparing 'bnsl': * cleaning src *

Hi, I am using R 2.3.0 and my .First() file has the following line which causes a warning: attach(what="c:/r/jmb/.RData", pos=3) I get the following message after .First() is loaded: During startup - Warning message: use of NULL environment is deprecated Is there a simple fix that will eliminate this warning message? Thanks. J. Breiwick

If I try to build a package with a vignette R CMD build Biobase I see * checking for file 'Biobase/DESCRIPTION' ... OK * preparing 'Biobase': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to re-build vignettes * creating vignettes ... OK * cleaning src Error in setwd(pkgname) : cannot change working directory Execution halted This is

Current core/Recommended Matrix package (0.999375-48) has been segfaulting against R 2.13-alpha/2.14-trunk for the last week or so (since R-2.13 was branched, when I started trying) when "run with R CMD check --use-gct": -------------- > pkgname <- "Matrix" > source(file.path(R.home("share"), "R", "examples-header.R")) >

As I was running "R CMD check" on one of my older packages (matlab), I was attempting to fix one of the NOTEs which bitches about attempting to change the search path using require(). In my case, I am repeating a package dependency for "methods" package in my .onLoad() function. Can this scenario (based on something B. Ripley discussed many years ago) no longer occur? Just