Displaying 20 results from an estimated 1000 matches similar to: "Package lattice: levelplot for matrix method produces images with blank lines ..."
2005 Apr 20
1
overlaying a contour line in a levelplot
Hello there,
I am creating a series of images using levelplot but I also want to
overlay a contour for a particular value as reference. Here is the
levelplot command for the image:
print(levelplot(d~x+y,data=t,cuts=20,scales=list(draw=F),xlab=NULL,ylab=
NULL,col.regions=heat.colors(100)[100:1]),split=c(1,1,1,1),more=T)
and then to add the contour plot (I only want a contour at level 5):
2004 Aug 31
1
add single contour line to levelplot
Hello,
I want to add a single contour line to a levelplot but can't figure out
how to do it 'on-the-fly'. When I include the last line in the code below,
I get the following error:
Error in NextMethod("[") : Argument "subscripts" is missing, with no default
Any tips on how to fix this are greatly appreciated!
Ian Jonsen
2009 Nov 09
1
How to change color the default in levelplot() ?
Dear R communities
May I seek your advices on how to change color the default in levelplot(), e.g. from the default of pink and light blue, to e.g. red and green ?
The levelplot function has 1 of the arguments being panel (which is actually panel.levelplot), but I am not sure where the commands to alter the color.
For example, I type:
p1<-levelplot(my.mat,colorkey=FALSE),
how could I
2004 Feb 25
2
levelplot add line
R folks,
I can't seem to find the instructions in the help files for the lattice
package that explain how to add lines, such as with lines() or ?, to a
levelplot. I'd be grateful if someone could point me in the proper direction.
Cheers,
Jeff
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Jeff Jorgensen
Center for Limnology jcjorgensen at wisc.edu
2006 Sep 13
1
forcing levelplot to use relative cuts (ie cuts for each panel)
Dear guRus,
I'm having trouble producing a levelplot with relative cuts for each
panel (my data has large differences in scales, so I want to use
quantiles for each panel).
My attempts to change the 'at' argument in panel.levelplot function
have not met with success.
Below is a toy example.
xy <- expand.grid(x = 1:3, y = 1:3)
aaa <- rbind(cbind(xy, z = 1:9, site =
2005 Jan 26
2
postscript() and levelplot() in a for loop
Hi,
I like to produce a series of levelplot graphs in postscript file, so I put
the trunk of codes including postscript() and levelplot() in a for loop. The
codes work fine outside the loop, but only produce empty .ps file when being
put within the loop. Is it a problem associated with postscript() or
levelplot()? How to get around the problem? Many thanks!
Yan
[[alternative HTML
2008 Oct 17
1
padding "bug" in lattice/levelplot
Hello,
I have encountered some unexpected behaviour with levelplot that may
simply be a misunderstanding on my part.
If I create a levelplot from a matrix with named columns, some
"padding" space appears at the top and bottom of the heatmap. Here is
an example, and I've used panel.fill to make the space I'm speaking of
evident (in green).
2010 May 21
3
Levelplot
Dear mailing list,
I am trying to find out, how do a levelplot without labels on the x- and y-axis.
The labels=FALSE does not work...can anyone help me?
m <- matrix(1:25, ncol=5)
levelplot(m, labels=F)
Regards,
Benedikt
2004 Apr 27
1
helps on levelplot
I'm a new user of levelplot, and are not familiar with the terminology
very well. Is the bar alongside the levelplot indicating color or shade
call "colorkey"? I have to adjust the size of its label, but couldn't
make it so far. This is how I did:
levelplot(z~x*y, grid, at=seq(0,1,by=0.1),
colorkey=list(labels=list(cex=2)))
But I got error message "Error in
2010 Mar 31
2
lattice: how to add points to the plot generated by levelplot()?
I am using levelplot() function from pkg:lattice and I want to add some
points
to the plot generated by levelplot()
similarly as in basic R graphic sequence: plot(...); points(...),
but it does not work.
I was reading documentation for lattice, but so far without much
success.
I would very much appreciate some tips.
Best regards,
Ryszard
2013 Feb 20
1
Problem with levelplot() in a loop
Dear R users,
I am trying to print heatmaps in a loop (with a pause). Idea is to
visualize changing correlations over time and for testing I wrote this
simple (reproducible) code below.
My problem is that levelplot() does not produce any output when I run the
code (though heatmap does). Ideally I would like to use levelplot() as it
produces a neat index on the side indicating the color and the
2010 Mar 26
1
How can I make a lattice::levelplot block size uniform
Dear lattice::levelplot users,
I would like to use levelplot to plot uniformly sized blocks.
Here is an example:
require (lattice)
u = runif(10) * 10
v = runif(10) * 10
z = runif(10)
levelplot ( z ~ u + v, aspect="iso" )
The resultant figures have points (blocks) that are of variable size that
attempt to fill in the space along each u, v dimension. Is it possible to
force each point
2007 Jun 27
1
levelplot in lattice
Hi,
I'm new to lattice. So please kindly be patient with me.
I'm trying to arrange groups of levelplots into 3 rows as follows:
Row1: Probabilities as functions of x and y, and conditioned on an event factor vector factor("a","b","c")
Row2: Number of days as functions of x and y, and conditioned on, again the same event
2004 Mar 09
2
levelplot problems !!!
Dear R users,
I have changed my R version to the new 1.8.1 and some problems appears when
using the previous levelplot code.
This is a simple example:
a <-1:10
b <-11:20
j <- rnorm(100)
grid<-expand.grid(a = a, b = b)
levelplot(j~a*b, grid)
Normaly in my previous vs this was suffice to produce the levelplot.
Now, an empty R graphics device appears with the following error
2012 Jun 16
2
aligning axis labels in a colorkey from levelplot
R does a great job with the fine details regarding plots. e.g in the
following:
library(lattice)
y <- -4:4/10
xyplot(y~1, las=1)
the y axis is labelled with numbers -0.4, -0.2, 0.0, 0.2, 0.4 with the
numbers aligned on the decimal point.
How do I get the same behaviour in the colorkey of a levelplot? e.g.
levelplot(matrix(y,3,3))
the numbers in the colorkey seem left-aligned, and
2012 Jan 06
1
Can levelplot colorkeys display a logarithmic scale evenly?
I'm using the {lattice} "levelplot" function to make a (more or less) 2-d
histogram, and for the most part it's working fine with my data. However, I
can't get the color key to do what I need. I can give it labels and custom
cutoffs, but my cutoff lines (and hence my labels) aren't evenly spaced, instead
they're more-or-less logarithmic, starting at
2007 Apr 25
2
levelplot and unequal cell sizes
I am using levelplot() from lattice with grids that have unequal cell
sizes. This means that the boundary between two cells is not always
half-way between nodes, as levelplot() assumes. The result is that some
cell sizes are rendered incorrectly, which can be painfully obvious if
using relatively large cells. Is there any work-around? I am using the
conditioning capability of lattice and
2010 Apr 21
1
overlaying a levelplot on a map plot
I've generated a levelplot showing the density distribution of a species
derived from survey transects, with lon, lat co-ordinates.
I'd like to overlay this on a map of the study region specified by:
map('worldHires', xlim = range(mlon), ylim = range(mlat)), where mlon, mlat
specifies the study region.
I've tried plotting the map first, then using the options: 'add=TRUE,
2010 Jun 25
2
Label Values in levelplot
I am trying to add labels equal to the value in a levelplot. I believe that
panel may be the way to go but cannot understand the examples.
In the following example:
X,Y,Z
A,M,100
A,M,200
B,N,150
B,N,225
I would like to label each of the rectangles 100,200,150 and 225 and colour
according to the value
The colouring is achieved by
levelplot(z ~ x *y , data) but then I get stuck with the labels
2006 Jan 11
2
Levelplot not working from file
I am trying to use the levelplot function from a command file.
Here is the code:
library(sp)
library(gstat)
library(lattice)
gatherData <- read.table("~/gather.txt", header = TRUE)
grd = makegrid(gatherData$x, gatherData$y, cell.size = 5)
k <- krige(z~x+y, ~x+y, data = gatherData, newdata = grd, nmax = 5)
levelplot(var1.pred~x+y, k, aspect = mapasp(k), main = "Predicted