similar to: Composition of NEAR and OR

Hi, Try this: lines1<- readLines(textConnection("gene1 or1|1234 or3|56 or4|793 gene4 or2|347 gene5 or3|23 or7|123456789")) lines2<-readLines(textConnection(">or1|1234 ATCGGATTCAGG >or2|347 GAACCTATCGGGGGGGGAATTTATATATTTTA >or3|56 ATCGGAGATATAACCAATC >or3|23 AAAATTAACAAGAGAATAGACAAAAAAA >or4|793 ATCTCTCTCCTCTCTCTCTAAAAA >or7|123456789

Buenas noches Javier y José, Estoy en contra de usar attach(), asi que propongo la siguiente alternativa con with(): # paquete require(epicalc) # los argumentos en ... pasan de epicalc:::cc # ver ?cc para mas informacion foo <- function(var1, var2, var3, ...){ or1 <- cc(var1, var2, ...) or2 <- cc(var1, var3, ...) list(or1 = or1, or2 = or2) } # datos x <-

# is there a bug in the calculation of the odds ratio in fisher.test? # Nicholas Horton, nhorton at smith.edu Fri Jan 22 08:29:07 EST 2010 x1 = c(rep(0, 244), rep(1, 209)) x2 = c(rep(0, 177), rep(1, 67), rep(0, 169), rep(1, 40)) or1 = sum(x1==1&x2==1)*sum(x1==0&x2==0)/ (sum(x1==1&x2==0)*sum(x1==0&x2==1)) library(epitools) or2 = oddsratio.wald(x1, x2)$measure[2,1] or3 =

Estimados Estoy entrenando hacer funciones que respondan a comandos, en esta caso en la salida gráfica se observa que dice : Exposure=var3 y outcome=var 1 quisiéramos que se reflejan los nombres de la base de datos : var1=estado, var2=cake, var3=chocolate Espero haberme explicado adecuadamente Adjunto tabla con datos #################################### #Comando que llama

Olly Betts writes: > On Thu, Jan 12, 2017 at 07:53:21PM +0100, Jean-Francois Dockes wrote: > > > Recoll also supports multi-word synonyms which could potentially > > generate PHRASE subqueries inside NEAR queries, but this > > understandably already did not work with 1.2, so the multi-word > > expansions are only used when proximity is not involved (by the way,

Hi Carlos, Jakob, The PBQP allocator was designed to support a very wide range of constraints, and can handle something like this easily. Say you have 4 of these orX/irX registers, then for any pair of virtual registers used in such an add instruction you would add the following constraint matrix to the PBQP instance: [ 0 inf inf inf ] [ inf 0 inf inf ] [ inf inf 0 inf ] [ inf inf inf 0

Olly Betts writes: > On Thu, Dec 29, 2016 at 07:21:41PM +0100, Jean-Francois Dockes wrote: > > Xapian 1.2 supports a query like: > > > > (A OR B) NEAR (C OR D) > > > > and distributes the factors to create something like: > > > > (A NEAR 2 C) OR (B NEAR 2 C) OR (B NEAR 2 C) OR (A NEAR 2 C) > > > > Xapian 1.4 rejects such

On Sep 7, 2010, at 3:01 AM, Carlos Sanchez de La Lama wrote: > The machine I am targeting has some special requirements for some > operations, say: > > ADD or1, ir1, r5 > > would add ir1 (input reg 1) and r5 and put the result in or1 (output reg > 1). The point id that input and output regs have to go paired (this > meaning an addition of ir1 with whatever always goes to

Hi all, The machine I am targeting has some special requirements for some operations, say: ADD or1, ir1, r5 would add ir1 (input reg 1) and r5 and put the result in or1 (output reg 1). The point id that input and output regs have to go paired (this meaning an addition of ir1 with whatever always goes to or1, or an in general irX + whatever goes to orX). AFAIK, InstrInfo.td only allow

Olly Betts writes: > On Wed, Jan 04, 2017 at 07:29:58AM +0100, Jean-Francois Dockes wrote: > > Olly Betts writes: > > > The ticket has a patch which attempts to handle the OR case (which seems > > > to be the part you actually care about) but this suffers from issues with > > > object lifetimes which get a bit involved in the details. Since there >

Hi Gordan, I received my Asus GTX 480 today (bought on ebay). Finally I succeeded in - quadrifying my GTX 480  into a Quadro 6000 ( softmod). - overpassing the 3-4GB of RAM on Windows XP 64 bits (domU) by applying a well known patch for Xen. - playing Crysis 2 and Darksiders II for a few minutes. http://img11.hostingpics.net/pics/953254ScreenshotXenSoftModedQuadro6000.png Using nvlfash I

Xapians! If tomorrow Xapian search engine would achieved the same performance and result in searches as Google we would not be able to beat Google, because we would create only a copy of the searches that already exists from Google search engine. However there is a way to beat anyone, and there is a way to beat Google successfully as well just do not give up. Some see it as implementing Ajax, or

In current Xapian SVN HEAD, there is a bug in the query parser concerned with the handling of wildcard terms with a "+" prefix. Specifically, a query such as "+foo* bar" will be parsed by the query parser into Xapian::Query("bar") if there are no terms in the database which start "foo". Instead, since the "+" term cannot be matched, I believe

Hi All, I used the OP_NEAR operator for queryparser, and when I searched for "apple store" from my own collection, the query is parsed as "Zappl:(pos=1) NEAR 11 Zstore:(pos=2)" but retrieved nothing. However, if I type in "Apple Store", the query is parsed as Xapian::Query((apple:(pos=1) NEAR 11 store:(pos=2))) and some results are showed. I'm not sure whether

Hello, I'm sorry if this seems similar to my last post but I thought it was significantly different to warrent a new thread. Using the dataset below, is there a way to generate a bar/line plot for the TACC/Catch of every lvl of stock? i.e. OR1,OR3,OR5. The picture at the bottom of this post is an example of the bar/line plot for OR1 which was generated when OR1 was the only stock in the

Hi, Xapian 1.2 supports a query like: (A OR B) NEAR (C OR D) and distributes the factors to create something like: (A NEAR 2 C) OR (B NEAR 2 C) OR (B NEAR 2 C) OR (A NEAR 2 C) Xapian 1.4 rejects such a query with the error message. OP_NEAR and OP_PHRASE only currently support leaf subqueries Because Recoll expands the terms to their stem siblings at query time, its NEAR queries

I probably should've used boolean terms in addition to numeric values when indexing, but currently I have a set of numeric values[1] and trying to avoid having to reindex ~250GB DBs (and asking numerous users to do the same). Say I have a bunch of values which I want to filter a query against. If I had boolean terms, it could just OP_OR against the whole set. IOW, this is what notmuch does

Hi Everyone, Have created a bar plot of the data below using the following code: barplot(TACC,space=0,names.arg=Year). I now want to add a series of connected points to represent the catch. I tried to do this using line(Catch) or points(Catch), however both of these commands result in each data point being aligned with the right edge of each bar. I need them to be solid points in the centre of

Hi, I've been using Xapian for a while. But there is a scene I don't know whether supported already. Suppose: 1. Raw query: how to make pizza 2. Parsed query: how AND to AND make AND pizza 3. Documents: d1: how to make pizza at home d2: 3 ways to make pizza d3: make pizza in 4 easy steps Question: 1. During searching process, how to retrieve d2, d3 (although they don't

On Fri, Jan 20, 2017 at 03:35:13PM +0100, Jean-Francois Dockes wrote: > Olly Betts writes: > > On Thu, Jan 12, 2017 at 07:53:21PM +0100, Jean-Francois Dockes wrote: > > > > > Recoll also supports multi-word synonyms which could potentially > > > generate PHRASE subqueries inside NEAR queries, but this > > > understandably already did not work with