similar to: Packages for snp, CNV data

> Dear expeRts, > > Currently, my colors are as follows: > mycol <- > c("blue1","blue2","blue3","blue4","black","yellow4","yellow3","yellow2","y > ellow1") > heatmap(snp, Rowv=NA, Colv=NA, col=mycol) > > However, I would like to have the following colors: > bright blue ->

Hi Jiangning, On Apr 15, 2014, at 11:12 PM, Jiangning Liu <liujiangning1 at gmail.com> wrote: > Hi Quentin, > > Thanks for your feedback! >> ​ARM64 generates pseudo instructions ARM64::MOVaddr and friends in ISEL stage, which intends to guarantee address serialization (page address + in-page address), and exposes adrp finally by pass ExpandPseudoInsts. The assumption of

On 04/04/2013 05:09 PM, Hal Finkel wrote: > Looking briefly at the code in comment 5 of PR15581, is that the pre-decrement case? > I can't test that case on PPC, so I can certainly believe that there is a problem somewhere. > The relevant code is a little farther down: > > APInt OV = > cast<ConstantSDNode>(Offset)->getAPIntValue(); > if (AM ==

Author: eschrock Repository: /hg/zfs-crypto/gate Revision: 975fad4fa05753c23a18254797cce42bb33b4375 Log message: 6433264 crash when adding spare: nvlist_lookup_string(cnv, "path", &path) == 0 6433406 zfs_open() can leak memory on failure 6433408 namespace_reload() can leak memory on allocation failure 6433679 zpool_refresh_stats() has poor error semantics 6433680 changelist_gather()

----- Original Message ----- > From: "Dmitry Antipov" <antipov at dev.rtsoft.ru> > To: "Hal Finkel" <hfinkel at anl.gov> > Cc: "Renato Golin" <renato.golin at linaro.org>, llvmdev at cs.uiuc.edu > Sent: Thursday, April 4, 2013 3:22:05 AM > Subject: Is r174746 broken on ARM? > > Hello Hal, > > I have a strong suspicion

Hi Jiangning, On Apr 14, 2014, at 10:31 PM, Jiangning Liu <liujiangning1 at gmail.com> wrote: > Hi Jim, > > 2014-04-15 4:28 GMT+08:00 Jim Grosbach <grosbach at apple.com>: > This sounds reasonable. Thanks, all. > > > - CSE of ADRP optimization (Jiangning) > > Quentin may have some input here. He’s done quite a lot of optimizations for ADRP sequences.

Dear list, I have to read a not-so-small bunch of not-so-small Excel files, which seem to have traversed Window 3.1, Windows95 and Windows NT versions of the thing (with maybe a Mac or two thrown in for good measure...). The problem is that 1) I need to read strings, and 2) those strings may have various encodings. In the same sheet of the same file, some cells may be latin1, some

On Fri, Feb 27, 2015 at 2:13 PM Ahmed Bougacha <ahmed.bougacha at gmail.com> wrote: > On Fri, Feb 27, 2015 at 1:42 PM, Eric Christopher <echristo at gmail.com> > wrote: > > > > > > On Fri, Feb 27, 2015 at 1:38 PM Ahmed Bougacha <ahmed.bougacha at gmail.com > > > > wrote: > >> > >> On Thu, Feb 26, 2015 at 2:33 AM, Kristof Beyls

I have a column of words, for example "DOG" "DOOG" "GOD" "GOOD" "DOOR" ... and I am interested in creating a matrix that contains the string edit distances between each pair of words. I am this close -> ' ' <- to writing the algorithm myself (which will allow for different variations on the string edit rules, indels,

On Fri, Feb 27, 2015 at 1:42 PM, Eric Christopher <echristo at gmail.com> wrote: > > > On Fri, Feb 27, 2015 at 1:38 PM Ahmed Bougacha <ahmed.bougacha at gmail.com> > wrote: >> >> On Thu, Feb 26, 2015 at 2:33 AM, Kristof Beyls <kristof.beyls at arm.com> >> wrote: >> > >> > Hi Ahmed, >> > >> > Did you run these

Hi, While working on adding newlib to my backend I hit the following assert : Assertion failed: BestRC && "Couldn't find the register class", file TargetRegisterInfo.cpp, line 112 The following llvm causes this : define void @specialBreak(i8* %out) nounwind { entry: %out.addr = alloca i8*, align 4 store i8* %out, i8** %out.addr, align 4 %0 = load i8** %out.addr,

On Fri, Feb 27, 2015 at 1:38 PM Ahmed Bougacha <ahmed.bougacha at gmail.com> wrote: > On Thu, Feb 26, 2015 at 2:33 AM, Kristof Beyls <kristof.beyls at arm.com> > wrote: > > > > Hi Ahmed, > > > > Did you run these experiments on a platform with a linker that makes > > use of the AArch64CollectLOH-pass-produced information? > > As Jim says,

Hi all! It's great to start with "for dummies" question, but hey, we all have been human infants also =) Problem is, that I can not log on to this channel and I haven't found anything helpful during the past few days either. 1. The irc.freenode.net server gives me "Couldn't look up your hostname" and "No identd (auth) response" followed with

Several of us locally are puzzling over the following problem: We have a central repository of R packages on our linux system. Occasionally, we'd like to install a different version of the same package (such as making updates to the survival package before it is released to the larger group, or a downloaded beta version). When using the library function, it appears that lib.loc is not

On Thu, Feb 26, 2015 at 2:33 AM, Kristof Beyls <kristof.beyls at arm.com> wrote: > > Hi Ahmed, > > Did you run these experiments on a platform with a linker that makes > use of the AArch64CollectLOH-pass-produced information? As Jim says, I'm on iOS, so yes. However, I'm mostly running tests with the pass disabled. > > I'm guessing that the

HI everyone, I'm plotting a histogram in R and within that histogram i need to demonstrate the percentage of another variable (Percentage of MutStatus) within the bins plotted inthe histogram....I don't know how to do that! Data:Validation_Status Mutation_Status TvarRatio Wildtype None 0.08 Wildtype None 0.08 Wildtype None 0.08 Wildtype None 0.08 Wildtype None 0.080139373 Wildtype None

Good day, The location of indels can be retrieved from a PairwiseAlignmentsSingleSubject object by using indel. Determining any difference between the two sequences, including substitutions, is not quick nor easy. I suppose that summary displays details of the mismatches, but the variable is of class PairwiseAlignmentsSingleSubjectSummary which has no documented accessors. So, the code to access

Hello Hal, I have a strong suspicion that your constant folding optimization introduced at r174746 is broken on ARM. There is a bug about it: http://llvm.org/bugs/show_bug.cgi?id=15581 There is no such issue with 3.2, and reverting r174746 on top of r178740 also fixes the problem. I'm trying to fix it myself, but still have no good ideas; so it would be great to have an advice from you.

This sounds reasonable. Thanks, all. > - CSE of ADRP optimization (Jiangning) Quentin may have some input here. He’s done quite a lot of optimizations for ADRP sequences. -Jim On Apr 12, 2014, at 12:08 AM, Tim Northover <t.p.northover at gmail.com> wrote: > Hi again, > > Having heard no howls of protest, those of us remaining on the > Wednesday decided to get down to

Hello, I will be very obliged if someone can help me with this statistical R problem: I am trying to do a Pearson correlation on my datasets X, Y with randomization test. My X and Y datasets are pairs. 1. I want to randomize (rearrange) only my X dataset per row ,while keeping the my Y dataset as it is. 2. Then Calculate the correlation for this pair, and compare it to your true