similar to: Help with levelplot color assignment in lattice

I'm looking for a way to plot lines on top of a levelplot(), where the lines are borders between cells of different values. The clines() function provides contours suitable for continuous data. I am dealing with discrete values, spatial clusters of nodes where each cluster has an integer value, and I want to plot the borderlines between these areas. So, in a levelplot having nodes with

How would I set the "scales" property of a lattice levelplot, so that I can add specific annotations at specific positions? For example, I have a 200 x 1000 element levelplot. Along the y-axis (along the 1000-element axis) I would like to add annotations on the left side of the levelplot at elements 120, 300, 500, and 805, which represent clusters of interest. Currently I have

Given the example: R> (levs <- quantile(volcano,c(0,0.1,0.5,0.9,0.99,1))) 0% 10% 50% 90% 99% 100% 94 100 124 170 189 195 R> levelplot(volcano,at=levs) How can I make the key categorical with the size of the divisions equally spaced in the key? E.g., five equal size rectangles with labels at levs c(100,124,170,189,195)? Apologies if this is obvious. -A R> version

I'm using the {lattice} "levelplot" function to make a (more or less) 2-d histogram, and for the most part it's working fine with my data. However, I can't get the color key to do what I need. I can give it labels and custom cutoffs, but my cutoff lines (and hence my labels) aren't evenly spaced, instead they're more-or-less logarithmic, starting at

Hi, I'm a novice with levelplot and need some assistance! Basically, I want a window which contains 6 levelplots of equal size presented in 3 columns and 2 rows. I've tried to approach it two ways. The first way leads to this question: Is there any way to concatenate levelplots from a factor vertically as opposed to horizontally? I'd like to pair the levelplots by factor.2 on

Hi, I want to draw a figure similar to http://dsarkar.fhcrc.org/lattice/book/images/Figure_13_07_stdBW.png from http://lmdvr.r-forge.r-project.org/figures/figures.html (figure 13.7) . However instead of using a contour plot as a panel for the wireframe I want to use a levelplot. Can somebody help me with this? Thanks in advance for any help, Kind regards, Anton Bossenbroek

I have been using levelplot but have had trouble calling it inside functions - something seems to go wrong when it's not called directly from the R command prompt. Simplest reproducible example: $ R --vanilla > library(lattice) > levelplot(matrix(1:4,2,2)) - This gives a nice plot in soothing pastel colors. Now, with a file lptest.r containing 2 lines: library(lattice)

Dear guRus, I'm having trouble producing a levelplot with relative cuts for each panel (my data has large differences in scales, so I want to use quantiles for each panel). My attempts to change the 'at' argument in panel.levelplot function have not met with success. Below is a toy example. xy <- expand.grid(x = 1:3, y = 1:3) aaa <- rbind(cbind(xy, z = 1:9, site =

I'm trying to plot a grid over a levelplot print( levelplot( var1.pred~x+y, data=saw.pred, aspect=mapasp(saw.pred), col.regions=terrain.colors(80), main=main) ) using the data... > saw.pred x y var1.pred var1.var sort 1 5 5 3.3761200 256.3363 saw 2 15 5 3.3884142 499.5695 saw 3 25 5 3.5394769

Hello there, I am creating a series of images using levelplot but I also want to overlay a contour for a particular value as reference. Here is the levelplot command for the image: print(levelplot(d~x+y,data=t,cuts=20,scales=list(draw=F),xlab=NULL,ylab= NULL,col.regions=heat.colors(100)[100:1]),split=c(1,1,1,1),more=T) and then to add the contour plot (I only want a contour at level 5):

Dear R-Help community, I am trying to overlay a single contour line over a correlation plot using levelplot in the lattice package. These are the two arrays: 1) a correlation plot over Africa - so each grid square is a different colour dependent on correlation - this is in an array: result_cor with dim[465,465] 2) a single contour line from a ***different data source*** - this is from data

Hi, I would like to add contour lines to a (trellis/lattice-) levelplot. Sure, there is the "contour=TRUE" argument, but this uses "cuts=..." (which is usually chosen very high for my plots. I guess cuts=99 is the best you can do (?)) for plotting the contour lines. Furthermore, I do not like the numbering of the contour lines this way. Therefore, I tried to add a

Hello, I have a (relatively long) function script that generates a levelplot. I don't want to include all of the code, so I have attached in file "miniDataSet.csv" an example for the data set "miniDataSet" that is called below. The function works OK, except that when the variables in the "splitCol" column get very large (as they are in this data set I

Dear R communities May I seek your advices on how to change color the default in levelplot(), e.g. from the default of pink and light blue, to e.g. red and green ? The levelplot function has 1 of the arguments being panel (which is actually panel.levelplot), but I am not sure where the commands to alter the color. For example, I type: p1<-levelplot(my.mat,colorkey=FALSE), how could I

Dear R users, I am trying to print heatmaps in a loop (with a pause). Idea is to visualize changing correlations over time and for testing I wrote this simple (reproducible) code below. My problem is that levelplot() does not produce any output when I run the code (though heatmap does). Ideally I would like to use levelplot() as it produces a neat index on the side indicating the color and the

Hello, I want to add a single contour line to a levelplot but can't figure out how to do it 'on-the-fly'. When I include the last line in the code below, I get the following error: Error in NextMethod("[") : Argument "subscripts" is missing, with no default Any tips on how to fix this are greatly appreciated! Ian Jonsen

I'm a new user of levelplot, and are not familiar with the terminology very well. Is the bar alongside the levelplot indicating color or shade call "colorkey"? I have to adjust the size of its label, but couldn't make it so far. This is how I did: levelplot(z~x*y, grid, at=seq(0,1,by=0.1), colorkey=list(labels=list(cex=2))) But I got error message "Error in

Hello, I have encountered some unexpected behaviour with levelplot that may simply be a misunderstanding on my part. If I create a levelplot from a matrix with named columns, some "padding" space appears at the top and bottom of the heatmap. Here is an example, and I've used panel.fill to make the space I'm speaking of evident (in green).

Hi all, I encountered a difference between versions 1.6.1 and 1.7.0 when using levelplot with an option 'at'. Here are the specs of the two platforms used: > R.version _ platform sparc-sun-solaris2.8 arch sparc os solaris2.8 system sparc, solaris2.8 status major 1 minor 6.1 year 2002 month 11 day 01 language R > R.version _ platform

Hi, I like to produce a series of levelplot graphs in postscript file, so I put the trunk of codes including postscript() and levelplot() in a for loop. The codes work fine outside the loop, but only produce empty .ps file when being put within the loop. Is it a problem associated with postscript() or levelplot()? How to get around the problem? Many thanks! Yan [[alternative HTML