similar to: Regression evaluation

Dear R-experts, Here below a toy example with some error messages, especially at the end of the code (Tuning the parameters). Your help to correct my R code would be highly appreciated. ####################################### #libraries library(lattice) library(ggplot2) library(caret) library(randomForest) ?? #Data

Hi Sacha, On second thought, perhaps this is more the direction that you want ... X2 = cbind(X_train,y_train) colnames(X2)[3] = "y" regr2<-randomForest(y~x1+x2, data=X2,maxnodes=10, ntree=10) regr regr2 #Make prediction predictions= predict(regr, X_test) predictions2= predict(regr2, X_test) HTH, Eric On Tue, May 9, 2023 at 6:40?AM Eric Berger <ericjberger at gmail.com>

Version 4.06 of the caret package was sent to CRAN. caret can be used to tune the parameters of predictive models using resampling, estimate variable importance and visualize the results. There are also various modeling and "helper" functions that can be useful for training models. caret has wrappers to over 50 different models for classification and regression. See the package

Version 4.06 of the caret package was sent to CRAN. caret can be used to tune the parameters of predictive models using resampling, estimate variable importance and visualize the results. There are also various modeling and "helper" functions that can be useful for training models. caret has wrappers to over 50 different models for classification and regression. See the package

I'm dealing with classification problems, and I'm trying to specify a custom scoring metric (recall at p, ROC, etc.) that depends on not just the class output but the probability estimates, so that caret::train can choose the optimal tuning parameters based on this metric. However, when I supply a trainControl summaryFunction, the data given to it contains only class predictions, so the

Hola!! Estoy intentando evaluar mi modelo de series temporales (uso auto.arima). Para ello he implemetado el método "rolling window" que se basa en ir añadiendo progresivamente datos al conjunto de train para testar el modelo. Por ejemplo: - Train: 1 año, test: día 1 (24 observaciones, una por hora) --> evalúo ese día (RMSE por ejemplo) - Train: 1 año + 1 día, test: día 2 -->

Version 4.63 of the caret package is now on CRAN. caret can be used to tune the parameters of predictive models using resampling, estimate variable importance and visualize the results. There are also various modeling and "helper" functions that can be useful for training models. caret has wrappers to over 99 different models for classification and regression. See the package vignettes

Version 4.63 of the caret package is now on CRAN. caret can be used to tune the parameters of predictive models using resampling, estimate variable importance and visualize the results. There are also various modeling and "helper" functions that can be useful for training models. caret has wrappers to over 99 different models for classification and regression. See the package vignettes

Hello, I'm with a conceptual doubt regarding Rsquared of both lm() and postResample(library caret). I've got a multiple regression linear model (lets say mlr) with anR² value of 67.52%. Then I use this model pro make predictions with predict() function using the same data as input , that is, use the generated model to predict the value associated with data that I used as input. Next, if

Usually when using raw glmnet I let the implementation choose the lambdas. However when training via caret::train the lambda values are predetermined. Is there any way to have caret defer the lambda choices to caret::train and thus choose the optimal lambda dynamically? -- Yang Zhang http://yz.mit.edu/

Hi, I am a graduate student applying published R scripts to compare the classification accuracy of 2 predictive models, one built using discriminant function analysis and one using random forests (webpage link for these scripts is provided below). The purpose of these models is to predict the biotic integrity of streams. Specifically, I am trying to compare the classification accuracy (i.e.,

Hi all, I've been using a custom summary function to optimise regression model methods using the caret package. This has worked smoothly. I've been using the default bootstrapping resampling method. For bagging models (specifically randomForest in this case) caret can, in theory, uses the out-of-bag (oob) error estimate from the model instead of resampling, which (in theory) is largely

Dave Langer in this video https://www.youtube.com/watch?v=z8PRU46I3NY uses the titanic data as an example of using caret to create xgbTree models. The caret train() function has a tuneGrid parameter which takes a list set up like so: tune.grid <- expand.grid(eta = c(0.05, 0.075, 0.1), nrounds = c(50, 75, 100), max_depth = 6:8,

Hello all, I have searched and have not yet identified a solution so now I am sending this message. In short, I need to split my data into training, validation, and testing subsets that keep all observations from the same sites together ? preferably as part of a cross validation procedure. Now for the longer version. And I must confess that although my R skills are improving, they are not so

Dear all, I have used following code but everytime I encounter a problem of not having coefficients for all the variables in the predictor set. # code rm(list=ls()) library(caret) # generating response and design matrix X<-matrix(rnorm(50*100),nrow=50) y<-rnorm(50*1) # Applying caret package con<-trainControl(method="cv",number=10) data<-NULL data<- train(X,y,

Dear community, I'm performing svm-regression with svm at library e1071. As I wrote in another post: "svm e1071 call - different results", I get different results if I use the svm.default rather than the svm.formula, being better the ones at svm.formula I've debugged both options. While debugging the svm.formula, I've seen that when I reach the call: ret <-

Dear all, I want to train my model with LASSO using caret package (glmnet). So, in glmnet, there are two parameters, alpha and lambda. How can I fix my alpha=1 to get a lasso model? con<-trainControl(method="cv",number=10) model <- train(X, y, "glmnet", metric="RMSE",tuneLength = 10, trControl = con) Thanks Alex Roy [[alternative HTML

Dear Researches, I am using RF (in regression way) for analize several metrics extract from image. I am tuning RF setting a loop using different range of mtry, tree and nodesize using the lower value of MSE-OOB mtry from 1 to 5 nodesize from1 to 10 tree from 1 to 500 using this paper as refery Palmer, D. S., O'Boyle, N. M., Glen, R. C., & Mitchell, J. B. O. (2007). Random Forest Models

Max and List, Could you advise me if I am using the proper caret syntax to carry out leave-one-out cross validation. In the example below, I use example data from the rda package. I use caret to tune over a grid and select an optimal value. I think I am then using the optimal selection for prediction. So there are two rounds of resampling with the first one taken care of by caret's train

Three more packages will be showing up on your mirror soon. The caret package (short for "Classification And REgression Training") aims to simplify the model building process. The package has functions for - data splitting: balanced train/test splits, cross-validation and bootstrapping sampling functions. There is also a function for maximum dissimilarity sampling. -