Displaying 20 results from an estimated 10000 matches similar to: "reproduction archives"
2012 Nov 07
3
extract indep vars from formula
Hello,
I'm trying to extract the independent variables from a formula. The
closest I've been able to come, aside from rolling my own, is the following:
> a = y ~ b * x
> attr(terms(formula(a)),"variables")
The reason I'm doing this is that I'm building a grid of points that I
use to construct a 3-d model prediction surface in rgl. If there are
more than two
2013 Mar 20
3
summarize dataframe based on multiple cols, not their combinations
Hi folks,
I'm trying to figure out how to get summarized data based on multiple
columns. However, instead of giving summaries for every combination of
categorical columns, I want it for each value of each categorical column
regardless of the other columns. I could do this with three different
commands, but i'm wondering if there's a more elegant way that I'm
missing. Thanks!
2012 Nov 02
2
backreferences in gregexpr
Hi Folks,
I'm trying to extract just the backreferences from a regex.
> temp = "abcd1234abcd1234"
> regmatches(temp, gregexpr("(?:abcd)(1234)", temp))
[[1]]
[1] "abcd1234" "abcd1234"
What I would like is:
[1] "1234" "1234"
Note: I know I can just match 1234 here, but the actual example is
complicated enough that I have to
2012 Apr 02
2
summaryBy: transformed variable on RHS of formula?
Hi Folks,
I'm trying to cut my data inside the summaryBy function. Perhaps
formulas don't work that way? I'd like to avoid adding another column
if possible, but if I have to, I have to. Any ideas?
Thanks,
Allie
require(doBy)
df = dataframe(a <- rnorm(100), b <-rnorm(100))
summaryBy(a ~ cut(b,c(-100,-1,1,100)), data=df) # preferred
solution, but it throws an
2011 Jun 22
2
strange date problem - May 3, 1992 is NA
> is.na(strptime("5/2/1992", format="%m/%d/%Y"))
[1] FALSE
> is.na(strptime("5/3/1992", format="%m/%d/%Y"))
[1] TRUE
Any idea what's going on with this? Running strptime against all dates
from around 1946, only 5/3/1992 was converted as "NA". Even stranger,
it still seems to have a value associated with it (even though is.na
thinks
2012 May 21
2
sweave tables as images?
Hello folks,
I've been on a journey trying to figure out how to manage documents that
are amenable to sharing and editing, but that contain dynamic content
generated by R. I've come to the following solution: I use Sweave to
generate labeled png & pdf figures, and I "Insert & Link" those figures
as "Pictures" in a Word 2010 doc. Thus, when data or code
2012 Oct 18
3
bigmemory for dataframes?
Hi Folks,
I've been bumping my head against the 4GB limit for 32-bit R. I can't
go to 64-bit R due to package compatibility issues (ROBDC - possible but
painful, xlsReadWrite - not possible, and others). I have a number of
big dataframes whose columns all sorts of data types - factor,
character, integer, etc. I run and save models that keep copies of the
modeled data inside the model
2010 Nov 17
3
translate vector of numbers to indicies of 0/1 matrix
Hello All,
Searched around, haven't found a decent solution.
I'd like to translate a vector of numbers to a matrix (or to a list of
vectors) such that the vector values would serve as indicies of the 1's
in an otherwise-zero-filled matrix (or list of vectors). For example:
> a = c(1,3,3,4)
# perform operation
[,1] [,2] [,3] [,4]
[1,] 1 0 0 0
[2,] 0 0 1
2012 Apr 07
3
How do Sweave users collaborate with Word users?
Hello All,
I'm getting my workflow switched over to Sweave, which is very cool.
However, I collaborate with folks (as many of you must as well) who use
Word to Track Changes amongst a group while crafting a paper. In the
simplest case, there will just be two people (one Sweave user and one
Word user) editing a paper.
I'm wondering, how do Sweave users go about this? I could convert a
2009 Aug 12
2
Symbolic references - passing variable names into functions
Hello All,
I am trying to write a function which would operate on columns of a
dataframe specified in parameters passed to that function.
f = function(dataf, col1 = "column1", col2 = "column2") {
dataf$col1 = dataf$col2 # just as an example
}
The above, of course, does not work as intended. In some languages one
can force evaluation of a variable, and then
2012 Mar 07
2
dot products
Hello,
I need to take a dot product of each row of a dataframe and a vector.
The number of columns will be dynamic. The way I've been doing it so
far is contorted. Is there a better way?
dotproduct <- function(dataf, v2) {
apply(t(t(as.matrix(a)) * v2),1,sum) #contorted!
}
df = data.frame(a=c(1,2,3),b=c(4,5,6))
vec = c(4,5)
dotproduct(df, vec)
thanks,
2013 Apr 02
2
exporting tables to word
Hello all,
What is your preferred method to export tables (from ftable()) to Word?
Do you just export to a text file and then copy/paste? Or perhaps via
HTML output?
Thanks,
Allie
2012 Apr 13
1
Coding columns for survival analysis
Hello Folks,
I have 5 columns for thousands of tree records that record whether that
tree was alive or dead. I want to recode the columns such that the cell
reads "found" when a live tree is first observed, "alive" for when a
tree is found alive and is not just found, and "mort" when it was
previously alive but is now dead.
Given the following:
> tree_live
2012 Apr 04
3
Rgui maintains open file handles after Sweave error
Hello Folks,
When I run the document below through sweave, rgui.exe/rsession.exe
leaves a file handle open to the sweave-001.pdf graphic (as verified by
process explorer). Pdflatex.exe then crashes (with a Permission Denied
error) because the graphic file is locked.
This only seems to happen when there is an error in the sweave document.
When there are no errors, no file handles are left open.
2012 Sep 13
1
remove all terms with interaction factor in formula
Hi Folks,
I'm trying to find a way to remove all terms in a formula that contain a
particular interaction.
For example, in the formula below, I'd like to remove all terms that
contain the b:c interaction.
> attributes(terms( ~ a*b*c*d))$term.labels
[1] "a" "b" "c" "d" "a:b" "a:c"
[7]
2017 Sep 14
1
To implement OO or not in R package, and if so, how to structure it?
>>> Did you read this?
>>> https://cran.r-project.org/doc/contrib/Leisch-CreatingPackages.pdf
>>>
>>> Maybe it could give you some insight in how to create package.
>>
>> That resource is ~9 years old. There are more modern treatments available. You
>> can read mine at http://r-pkgs.had.co.nz.
>>
>> Hadley
>>
Thanks both.
2012 May 24
1
use list as function arguments
Hello Folks,
Is there any way to pass a list into a function such that the function
will use the list as its arguments? I haven't been able to figure that out.
The background: I'm trying to build a function that will apply another
function multiple times, each time with a different set of specified
arguments. I'm trying to figure out how to pass in a list of argument
lists, then
2012 May 04
1
auditing R's memory usage
Hi Folks,
I'm running 32-bit R 2.14 in RStudio on my Win 7 x64 system with 8GB
RAM. I'm getting memory problems as R wants to swallow more than the
4GB limit.
I think I'm stuck at 4GB as I have to use 32-bit R for a number of
packages (ODBC, etc). However, I doubt I really need to be using that
much memory - I'm probably being very sloppy in my memory management,
leaving lots
2017 Sep 14
3
To implement OO or not in R package, and if so, how to structure it?
Hello all,
I am trying to decide how to structure an R package. Specifically, do I
use OO classes, or just provide functions? If the former, how should I
structure the objects in relation to the type of data the package is
intended to manage?
I have searched for, but haven't found, resources that guide one in the
*decision* about whether to implement OO frameworks or not in one's R
2010 May 19
1
export dataframe's column classes to a list
Hi Folks,
I want to export a dataframe's column classes to a list so that I can
reinstantiate the dataframe from a CSV file in the future. (I know
about save(), which I'm using in addition to this).
what I want to do is the following:
write.csv(myframe);
col_classes = get_col_classes(myframe);
write.csv(col_classes, "column_classes")
... time passes, R gets