similar to: tryCatch?

I'm trying to insert rows of a data.frame into a database table, or update where the key fields of a record already exist in the table. I've come up with a possible solution below, but would like to hear if anyone has a better solution. # The problem demonstrated: # Create a data.frame with test values library(RODBC) tbl <- data.frame( key1 = rep(1:3, each = 2), key2 =

Hello all! Can someone confirm whether there is a bug or not? I was trying to use sqlUpdate in place of sqlSave as data set I import has duplications. However I get errors while using fast=FALSE argument to safely update/ignore duplicates: Error while executing the query[RODBC] ERROR: Could not SQLExecDirect 'UPDATE "data" SET "logger"=1,

Hi, I am running the RODBC examples form the help guide. I am trying to UPDATE a table in an Access data base but I am having an error. library(RODBC) library(termstrc) path = getwd() setwd(getwd()) dbName = "data.mdb" pathdbname = paste(path,"/",dbName,sep="") accesChannel = odbcConnectAccess(pathdbname, uid = "", pwd = "")

I am trying to export a dateframe created in R: > Duration_summary V1 2.5 % 97.5 % V4 2.5 % 97.5 % [1,] 1 0.46076018 1.128776 1.000000 0.5280828 0.9576338 [2,] 0 0.00000000 0.000000 1.000000 0.1741793 1.2352705 [3,] 1 0.46566719 1.313711 1.000000 0.7233312 1.4097987 [4,] 1 0.38866371 2.453226 0.976024 0.6377314 1.3493957 [5,] 1 0.08894066 1.036830

Hi all: I have created a MS Access table named 'PredictedValues' through the statement below: myDB <- odbcConnectAccess("C:/Documents and Settings/Owner/Desktop/Rpond Farming.mdb",uid="admin",pwd="") sqlSave(myDB,PredictedValues,rownames=FALSE) close(myDB) But if I run the code again with new values I get the message below: Error in sqlSave(myDB,

I'm changing some functions from storing data in SQLite (using RSQLite) to storing it in PostgreSQL (using RODBC). When trying to store very long character fields I get the following message: > sqlSave(pg, Grids, rownames = FALSE, append = TRUE) Warning messages: 1: In odbcUpdate(channel, query, mydata, paramdata, test = test, verbose = verbose, : character data truncated in column

Dear all, I using R version 2.9.0 on Windows XP and want to insert data from a data frame in R into a oracle database via sqlUpdate with the package RODBC. My example is the following: TEST0<-data.frame(NR=c(1,2,600),NAME=c("JK","TR","AR"), DATUM=c("2009-01-01","2010-01-02","2010-06-09")) If I create the table in the database with

G'day Federico, On Wed, 17 May 2023 10:42:17 +0000 "Calboli Federico (LUKE)" <federico.calboli at luke.fi> wrote: > sexsnp = rep(NA, 1750) > for(i in 1:1750){tryCatch(sexsnp[i] = fisher.test(table(data[,3], > data[,i + 38]))$p, error = function(e) print(NA))} Error: unexpected > '=' in "for(i in 1:1750){tryCatch(sexsnp[i] =" Try: R> for(i in

The following example involves a function whose on.exit() expression both generates an error and catches the error. The body of the function also generates an error. When calling the function wrapped in a tryCatch, should that tryCatch's error function be given the error from the body of the function, since the one from the on.exit has already been dealt with? Currently the outer tryCatch

Having a hard time understanding the help files for tryCatch. Looking for a little help with the following statement which sits inside a for loop zest[i] <- tryCatch(sapply(getNodeSet(zdoc, "//zestimate/amount"), xmlValue), error=function() zest[i] <-"NA") zest is a numeric vector If the sapply statement evaluates to an error, I'd like to set the value of zest[i]

Dear all, I am not sure I understand fully the functionality of "tryCatch" and "try" commands and how these are used to continue a for/next loop if an error occurs within the loop. Can somebody point me to material (or share some code) with more extensive examples than the ones in the help/FAQ pages? Do explain my problem in more detail: for (i in 100:1000) { ## do

Buenos días, Quiero hacer una función con un "if", que si devuelve un error dentro de él se pare la ejecución de la función devolviendo un valor. El código que tengo, para las pruebas, es el siguiente: prueba<-function(a){ b<-"no ha hecho stop" c<-"hago el stop" if(a<3){ variable<-"hola" tryCatch({ write("entro en el

With tryCatch() it is possible to catch interrupts with tryCatch(). Then you can use a 'finally' statement to clean up, release resources etc. However, how can I "protect" against additional interrupts? This is a concern when the hold down Ctrl+C and generates a sequence of interrupts. Example: tryCatch({ cat("Press Ctrl+C...\n"); Sys.sleep(5); }, interrupt =

Because `<-` and `=` do different things (and I am one of the old fossils that wish they had not been confounded). `fun(x <- expr)` Assigns the value of `expr` to the variable `x` in the frame/environment that `fun` is called from. `fun(x = expr)` Assigns the value of `expr`to the variable `x` in the frame/environment created for and used by `fun` subject to the rules of argument matching.

Hello, I run a fisher.test() in a loop, with the issue that some of the data will not be useable. To protect the loop I used tryCatch but: sexsnp = rep(NA, 1750) for(i in 1:1750){tryCatch(sexsnp[i] = fisher.test(table(data[,3], data[,i + 38]))$p, error = function(e) print(NA))} Error: unexpected '=' in "for(i in 1:1750){tryCatch(sexsnp[i] =" But this works: for(i in

Hello all, I'm a beginner in R working on a script that will produce a set of models (linear, polynomial and logistic) for each location in a dataset. However, the self-starting logistic model often fails - if this happens I would like to just skip to the next iteration of the loop using tryCatch. I've looked at a few examples and read the help file, but didn't understand tryCatch

So after about 4 hours struggling with Try and TryCatch I am throwing in the towel. I have a more complicated function that used logspline through iterative distributions and at some point the logspline doesnt function correctly for some subsets but is fine with others so I need to be able to identify when the error occurs and stop curtailing the distribution and I think this Try or TryCatch

Dear R-devel community, There appears to be an inconsistency in R C API about the exceptions that can be raised from C code. Mapping of R C funs to corresponding R functions is as follows. error -> stop warning -> warning REprintf -> message Rprintf -> cat Rprint/cat is of course not an exception, I listed it just for completeness. The inconsistency I would like to report is

HI all, I am using R (version 2.13.1) in batch mode on a server and I use trycatch() to handle the exceptions. When the code run without any exceptions, everything goes fine, however as soon as trycatch handle an error, my code works fine but R keeps hold on the folder after quiting. Therefore when I try to delete the folder it cannot... do you have any idea of which function can be the

When batch processing analysis, I use tryCatch() for failure handling and to prevent unwanted interrupts. I write detailed progress to log file and conditions (warnings and errors) are written to the same log file immediately by using withCallingHandlers(..., condition=function(c) cat(c, file=logFile)). However, I would also like to write the call stack to the log file to further simplify