similar to: R CMD build creates tar file instead of tar.gz file

Hi everyone, I have built an R package and for the sake of speed I have decided to rewrite some part of the code in C++. In my original R code I use the pnorm, qnorm, rnorm, pgamma, dgamma, rgamma, rbeta and runif function. First I was thinking in going with the boost libraries, but I noticed the functions described above are available within the R.h header file (or is it Rmath.h?). So my

Hello everyone! First of all, please note that I'm working under Windows 7. I have written a Gibbs sampler in R and I'm now in the process of translating it in C++ to increase the speed. I'm relatively new to C++ and this question may be trivial, but my search so far have been unsuccessful. In my Gibbs sampler I am using some basic R functions (like the rep function for example)

Hello, I'm trying to build a simple cpp file using the R CMD SHLIB command and I always receive the same error message: cygwin warning: MS-DOS style path detected: C:/PROGRA~1/R/R-212~1.1/etc/i386/Makeconf Preferred POSIX equivalent is: /cygdrive/c/PROGRA~1/R/R-212~1.1/etc/i386/Makeconf CYGWIN environment variable option "nodosfilewarning" turns off this warning. Consult

Dear R users, I have been trying to use RQuantLib in the 2.12.2 R version. I downloaded the .zip file from <http://sourceforge.net/projects/quantlib/files/QuantLib/> http://sourceforge.net/projects/quantlib/files/QuantLib/ which didn't work, so I I downloaded the package source from <http://sourceforge.net/projects/quantlib/files/QuantLib/1.0.1/>

Dear All, I am a beginner creating R packages. I followed the Leisch (2009) tutorial and the document ?Writing R Extensions? to write an example. I installed R 2.12.2 (I also tried R2.13.2), the last version of Rtools and the recommended packages in a PC with Windows 7 Home Premium. I can run R CMD INSTALL linmod in the command prompt and the R CMD check linmod. The following outputs are

I follow Alan Lenarcic's very helpful tutorial on building R package for Windows (XP), which could be found in www.stat.columbia.edu/~gelman/stuff_for_blog/AlanRPackageTutorial.pdf<http://www.stat.columbia.edu/~gelman/stuff_for_blog/AlanRPackageTutorial.pdf>. The package involves a small dll compiled from some very simple C++ codes. The build process seemed to work smoothly, until i

Dear R development: I'm not sure if this is the appropriate list, but it's a start. I would like to put together a package which contains a CUDA program on Windows 7. I believe that it has to do with the Makeconf file in the etc directory. But when I just use the nvcc with the shared option, I can use the dyn.load command, but when I use the is.loaded function, it shows FALSE.

Hi, everyone, I am just trying to use Rcpp in my computer, and I would like to try a simple example from website, but R keeps reporting me error. I am using Windows XP, and has installed Rtools and GSI. Here is the response: > src = ' + Rcpp::NumericVector xa(a); + Rcpp::NumericVector xb(b); + int n_xa = xa.size(); + int n_xb = xb.size(); + + Rcpp::NumericVector xab(n_xa + n_xb - 1);

Dear friends, I am building an R package called *mypackage*. I followed every possible steps (to my understanding) for the same. I got following problem while doing *R CMD check mypackage*. * installing *source* package 'mypackage' ... ** libs cygwin warning: MS-DOS style path detected: C:/PROGRA~1/R/R-213~1.0/etc/i386/Makeconf Preferred POSIX equivalent is:

I am getting this error message when I try to run Rcmd SHLIB myprog.c. There appears to be a missing / between etc and i386 in the path. I am on Windows Vista and am using R version 2.12.1 Patched (2010-12-16 r53864) and just downloaded Rtools 2.12 today. Is this a bug in R? How can I resolve this? C:\tmp2>Rcmd SHLIB myprog.c cygwin warning: MS-DOS style path detected:

I am installing RMySQL_0.9-3.tar.gz pkg on windows-7 64 bit machine as:--- C:\Users\trendwise> R CMD INSTALL --configure-args='--with-mysql-inc="C:\\Program Files\\MySQL\\MySQL Server 5.5\\include"' "C:\\Users\\trendwise\\Downloads\\RMySQL_0.9-3.tar.gz" * installing to library 'C:/Users/trendwise/Documents/R/win-library/2.14' * installing *source* package

hi, after installing R-2.6.0 the function "names" doesn't work anymore on my windows xp machine. for example for a simple vector i get > z <- 1:3 > names(x) Error in UseMethod("name"): no applicable method for "names" ... instead of NULL. the same is true for lists and dataframes. attr(z, "names") is a workaround, but i don't want to

Hi, After uninstalling Rtools 2.14.0, I have installed the latest version of Rtools 2.15.0 which gives the two folders C:\Rtools\bin C:\Rtools\gcc-4.6.3 R is installed in the directory C:\R\R-2.15.0 I have set the Environment Variable PATH=c:\Rtools\bin;c:\Rtools\gcc-4.6.3\bin;c:\R\R-2.15.0\bin;<others> I am trying to install a custom package (BMEA_0.2.1) which is exactly

I have been trying to install RMySQL on Windows 7 following the procedure at: http://biostat.mc.vanderbilt.edu/wiki/Main/RMySQL I think I have properly installed RTools and created a proper Renviron.site file saying: MYSQL_HOME="C:/Program Files/MySQL/MySQL Server 5.5" When I try to install the packages from source, I get warnings that suggest I'm still not quite "with the

I am attempting to analyze Affymetrix exonchip data using the exon map package. I have installed this package but have had problems installing the associated programs, specifically RMySQL since no windows binary exists. I have followed the directions for compiling the package as found on - http://biostat.mc.vanderbilt.edu/wiki/Main/RMySQL - but still have an error when executing the

Dear developers, I am trying to run some C/ Fortran code in R. Although I have experience with that in Windows (Vista) 32 bit, I could not succeed in 64 bit. I downloaded the following: - R 2.12.0 - Rtools 212 - miktex 2.9 - inno setup 5 -Afterwards, I changed the path as: ?C:\Program Files\R\R-2.12.0\bin;C:\Rtools\bin;C:\Rtools\MinGW64\bin;C:\Program Files\HTML Help Workshop;C:\Program Files

Hello all, I was trying to compile a simple C program hello.c using R CMD SHLIB hello.c. MY R software residing in C:\Program Files\R\R-2.15.0, and also I have downloaded the Rtools 2.15.0 and it is in C:\Rtools, MY file(hello.c) is in E:\R_dir. I have followed the procedures given below 1. In a new CMD.exe window I have set the path as c:\ Rtools\bin; C:\Rtools\MinGW\bin;C:\Program

Hello I have recently installed R 2.14.2 on a brand new pc running Windows 64. One of things I would like to do is to recompile my R package (with C and fortran source codes) for this new environment (it works on a mac and on a linux box). To this end, I had rtools 2.14 downloaded and installed (I have also added 2.14.2/bin/x64 to PATH so that Rcmd works on a terminal). On a cmd terminal I

Hello useRs I am trying to build a package for personal use and for making easier working with other people but I keep getting the same error message about the DESCRIPTION file not existing. when trying to install from a source tar.gz file: Error in .read_description(dfile) : file 'C:/Users/Propriétaire/AppData/Local/Temp/RtmpHFMONb/R.INSTALL647a3535/mypkg/DESCRIPTION' does not

Hello: What do I need to do to compile R packages (especially RMySQL) for the 64-bit version of R 2.12.0 under Vista_x64? I upgraded to "Rtools212.exe" yesterday but immediately got errors from "R CMD check RMySQL_0.7-5.tar.gz". After the first error, I installed it a second time, then got "undefined reference to" roughly 50 different names beginning