similar to: ggplot, transformation, and ylim

If I have data: dat<-data.frame(a=rnorm(20),b=rnorm(20),c=rnorm(20),d=rnorm(20),site=rep(letters[5:8],each=5)) And want to plot like this: ctr<-1 for(i in c('a','b','c','d')){ png(file=paste('/tmp/plot_number_',ctr,'.png',sep=''),height=8.5, width=11,units='in',pointsize=9,res=300) print(ggplot(dat[,names(dat) %in%

Hello, I am trying to create a series of boxplots with the following data, three columns, "Day" (1 or 2), "Site" (1-4), and "VO2" (some values missing for some Sites or Days) > CorbulaMR3 Day Site VO2 1 1 1 88.92223 2 1 1 86.17873 3 1 1 61.08950 4 1 1 190.47922 5 1 1 98.65930 6 1 1 121.03549 7 1 1 67.88404 8

Also, it is possible to change "ylim" also? 2012/7/1 li li <hannah.hlx@gmail.com> > Dear all, > I have a few questions regarding the boxplot output from the > "geom_boxplot" function. > Attached is the output I get. Below are my questions: > > 1. How can I define the xlab and ylab myself? > Also I would like to remove

Hi, I was wondering if someone could give me a hint or two. I'm having problems generating ggplot2 boxplots . The plot that is has dots but no boxplots. Below is the dataset > testing_ggplot V1 V2 V3 1 256 Disabled 688.61 2 256 Disabled 698.63 3 256 Disabled 700.02 4 256 Disabled 693.36 5 256 Disabled 688.8 6 256 Disabled 697.72 7 256 Disabled 698.15 8 256

Dear all, I want to get a series of boxplots (grouped by two factors) and I want to overlay the original observations and the following code does almost what I want: library(ggplot) ddf <- data.frame(x=factor(rep(LETTERS[1:4], each=30)), y = runif(120,0,10), grp = factor(rep(rep(1:3, 10), 4))) ggplot(ddf, aes(x, y, colour=grp)) + geom_boxplot() + geom_point() Yet the position of the points

Hi Hadley: Not sure if you received my email, so I am resending it again. I have dealt with this before and I can't remember how it got resolved. It is too much data to reproduce the example below(49.000 records) but all I am after is trying to get the x axis breaks. I want my x axis to go from 27 to 51 and 1 to 25 by 2. I am trying to concatenate the breaks but it sorts the seq() in ascending

Dear all I would like to superpose some smoothing line through boxplot in ggplot > dput(ad) structure(list(konc.f = structure(c(1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 6L, 6L, 6L, 7L, 7L, 7L, 7L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 6L, 6L, 6L, 7L, 7L, 7L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 3L, 3L, 3L, 3L, 4L, 4L, 4L,

Hello, I am trying to generate a set of boxplots using ggplot with the following data with 4 columns (Day, Site, VO2, Cruise) AllCorbulaMR Day Site VO2 Cruise 1 1 1 148.43632670 1 2 1 1 61.73864969 1 3 1 1 92.64536096 1 4 1 1 73.35434957 1 5 1 1 69.85568810 1 6 1 1 98.71116866 1 7 1 1 67.57880107

I want to draw boxplot where the geom_points are displayed based on "ERBB2.MUT" subset and they should be displayed in the right box (based both on the "ERBB2.2064" field and "ERBB2_Status"). However, given my command I currently only see "red" points corresponding to "MUT" subset in one straight line corresponding to only "ERBB2.2064"

ggplot2 ------------------------------------------------------------ ggplot2 is a plotting system for R, based on the grammar of graphics, which tries to take the good parts of base and lattice graphics and avoid bad parts. It takes care of many of the fiddly details that make plotting a hassle (like drawing legends) as well as providing a powerful model of graphics that makes it easy to produce

ggplot2 ------------------------------------------------------------ ggplot2 is a plotting system for R, based on the grammar of graphics, which tries to take the good parts of base and lattice graphics and avoid bad parts. It takes care of many of the fiddly details that make plotting a hassle (like drawing legends) as well as providing a powerful model of graphics that makes it easy to produce

Hi there, Googling through the archives it looks like I'm the ferst person to want this... My aim is to set up a voicemail application with a custom greeting before *AND AFTER* the punter has left the message. Right now the relevant section of my dialplan is like this: exten => 2,1,Playback(/media/asterisk/answerphone-en) exten => 2,n,VoiceMail(2000,s) exten =>

Problem: I am trying to get the histogram and box plot x axis to match. I?ve tried using the expand_limits function to make the axis match but that didn?t make the axis match. The histogram?s axis are still consistently larger than the ones for the box plot (though the function did help). Does anyone have a suggestion as to what I should do instead? Background: I am building a Shiny app that

Hola Soy Leticia, quería hacer una consulta al grupo a ver si me podéis ayudar. Tengo unos datos de proteínas, el data frame es: 5 columnas iniciales que tienen información sobre las proteínas y después las columnas con las intensidades, de las cuales no se cuantas condiciones tienen ni cuántas réplicas por condición. Estoy intentando hacer un cálculo del coeficiente de variación por grupo y

Hi everyone,I'm trying to figure out how to use gPath and the documentation is not very helpful :( I have the following plot object: plot-surrounds:: background plot.gTree.378:: background guide.gTree.355:: (background.rect.345, minor-horizontal.segments.347, minor-vertical.segments.349, major-horizontal.segments.351, major-vertical.segments.353) guide.gTree.356::

Hola a todos Me gustaría saber si me pueden ayudar con lo siguiente. Realicé un Boxplot usando ggplot2 para visualizar el comportamiento de dos variables. Visualmente no se notan las diferencias porque la gráfica de la derecha (parásitos en el abdomen) llega hasta 20 en el eje y. ¿Cómo puedo hacer para que las dos gráficas muestren la misma escala en el eje Y, es decir, que las dos lleguen a 60?

Hola Leticia Acomodar datos para analizar suele llevar más trabajo que el análisis. Yo prefiero en un data.frame colocar todos los datos, porque siempre es más fácil filtrar que agregar. Cuándo tengo el data.frame con todo, realizo un plot (datos), y muchas veces en la gráfica veo cosas que me llaman la atención, de esta forma busco algo de antemano no sospechaba. No es necesario que conozcas

It looks like your V3 is a factor. testing_ggplot <- data.frame( V1=factor(c(256, 256, 256, 272, 272, 272)), V2=c("Disabled", "Disabled", "Enabled", "Disabled", "Enabled", "Enabled"), V3=681:686) library(ggplot2) ggplot(testing_ggplot, aes(V2, V3 )) + geom_boxplot() + facet_wrap( ~ V1) + labs(title="what you

Thanks Ben, Here the reproducible example. It works without notch=TRUE, but provides an error with notch=TURE Error in `geom_boxplot()`: ! Problem while converting geom to grob. ? Error occurred in the 1st layer. Caused by error in `ans[ypos] <- rep(yes, length.out = len)[ypos]`: ! replacement has length zero Run `rlang::last_trace()` to see where the error occurred. Warning message: In

Hi all: I am having trouble dropping levels, got a few hints online?without success. Please consider the dataset below: ?I was under the inpression that subset(......drop=TRUE) would work but it doesn't library(ggplot2) ??? library(hmisc) x <- structure(list(first = c(38.2086, 43.1768, 43.146, 41.8044, 42.4232, 46.3646, 38.0813, 40.0745, 40.4889, 38.6246, 40.2826, 41.6056, 34.5353,