similar to: Transform a dataset from long to wide using reshape2

Displaying 20 results from an estimated 4000 matches similar to: "Transform a dataset from long to wide using reshape2"

2010 Nov 01
2
transforming a dataset for association analysis RESHAPE2
I get the following message when using the reshape2 package line > tDat.m<- melt(Dataset) Using Item, Subject as id variables > tDatCast<- acast(tDat.m,Subject~Item) Aggregation function missing: defaulting to length Note Problem Statement- convert dataframe Subject Item Score 1 Subject 1 Item 1 1 2 Subject 1 Item 2 0 3 Subject 1 Item 3 1 4 Subject 2 Item 1 1 5
2011 Aug 08
1
Reshape2 sytax
Hi Hadley et all, I am struggling with reshape2 and melt works and melt_check (filtered151) seems fine My cast command was acast (filtered151, Time ~ Species ~ Number) > melt_check (filtered151) Using time, Species as id variables $id [1] "time" "Species" $measure [1] "Number" When I execute cast the data matrix is in the correct order but the data
2011 Aug 08
1
Help on reshape2 data frame rearrangement
Dear help list: I am trying to reshape a data frame from long to wide format and with a reduced variable list using reshape2. The original data frame format is: Site Obs_no LengthSite 1 Obs 1 10Site 1 Obs 2 13Site 1 Obs 3 14.........Site 2 Obs 1 5Site 2 Obs 2 7Site 2 Obs 3 9 Site and Obs_no are factors and Length is a numeric variable. There are 15
2010 Sep 10
0
reshape2: a reboot of the reshape package
Reshape2 is a reboot of the reshape package. It's been over five years since the first release of the package, and in that time I've learned a tremendous amount about R programming, and how to work with data in R. Reshape2 uses that knowledge to make a new package for reshaping data that is much more focussed and much much faster. This version improves speed at the cost of functionality,
2010 Sep 10
0
reshape2: a reboot of the reshape package
Reshape2 is a reboot of the reshape package. It's been over five years since the first release of the package, and in that time I've learned a tremendous amount about R programming, and how to work with data in R. Reshape2 uses that knowledge to make a new package for reshaping data that is much more focussed and much much faster. This version improves speed at the cost of functionality,
2011 Jan 04
0
reshape2 1.1
Reshape2 is a reboot of the reshape package. It's been over five years since the first release of the package, and in that time I've learned a tremendous amount about R programming, and how to work with data in R. Reshape2 uses that knowledge to make a new package for reshaping data that is much more focussed and much much faster. This version improves speed at the cost of functionality,
2011 Jan 04
0
reshape2 1.1
Reshape2 is a reboot of the reshape package. It's been over five years since the first release of the package, and in that time I've learned a tremendous amount about R programming, and how to work with data in R. Reshape2 uses that knowledge to make a new package for reshaping data that is much more focussed and much much faster. This version improves speed at the cost of functionality,
2017 Jul 03
3
reshaping the data
Dear all, I would appreciate please a piece of help regarding the use of acast/dcast functions in reshape2 package. Specifically, I'm working with a data frame, that has information about SAMPLE, GENE, and TYPE of MUTATION (as shown below): Sample Gene Type 22M AEBP1 SNV 17M AEBP1 SNV 22M ATR INDEL 22M ATR SNV 11M BTK SNV 11M BTK
2013 Jun 05
2
reshape2 issue continued
Hi again all, Several replied ASAP that I also needed reshape loaded and not just reshape2. Hmmm tried that and I had some output but not the correct format. What I need is to run simulations of time overlap between species as per the simulation program data input constraints: The basis for the simulations is a species by _time-use matrix in which species are arranged in rows, and time
2012 Jul 24
3
Simple reshape problem I am completely missing
I seem to be doing something really stupid or missing something really obvious but what? I have a simple three column data.frame that I would like to reshape to wide preferably using reshape2. An example from http://stackoverflow.com/questions/9617348/reshape-three-column-data-frame-to-matrix looked perfect except I wanted a data frame but it seemed okay. I just changed acast to dcast and it
2010 Oct 30
2
transforming a dataset for association analysis
Hi I would like to transform a data frame like Subject Item Score Subject 1 Item 1 1 Subject 1 Item 2 0 Subject 1 Item 3 1 Subject 2 Item 1 1 Subject 2 Item 2 1 Subject 2 Item 3 0 .... *to * Subject Item1 Item2 Item3 .....Item N Subject1 1 0 1 Subject2 1 1 0 ........ SubjectP.. Apologize for the simple nature of my query but I am stuck.
2011 Aug 02
2
Data frame to matrix - revisited
Hi, I've tried to look through all the previous related Threads/posts but can't find a solution to what's probably a simple question. ? I have a data frame comprised of three columns e.g.: ? ID1?ID2?Value a?b?1 b?d?1 c?a?2 c?e?1 d?a?1 e?d?2 ? I'd like to convert the data to a matrix i.e.: ? ?a b c d e a n/a 1 2 1 n/a b 1 n/a n/a 1 n/a? c 2 n/a n/a n/a 1 d 1 1 n/a n/a 2 e n/a n/a 1
2010 Oct 01
3
scoping goes wrong when some functions are used within others.
Dear, I'm following the r tag on stackoverflow.com, and couldn't but notice there are quite some questions popping up that deal with scoping in relation to custom functions. I grinded my teeth on it already, and I have absolutely no clue what goes wrong. The general pattern is as follows : ff <- function(x){ y <- some_value some_function(y) } > ff(x) Error in eval(expr,
2017 Jul 03
0
reshaping the data
Hi Do you want something like dcast(test, Sample~Gene, fun=function(x) paste(x, collapse=",")) or dcast(test, Sample~Gene, fun=function(x) sum(as.numeric(x))) 1 means INDEL, 2 means SNV and three means both Cheers Petr > -----Original Message----- > From: R-help [mailto:r-help-bounces at r-project.org] On Behalf Of Bogdan > Tanasa > Sent: Monday, July 3, 2017 9:22 AM
2011 Feb 23
1
Fwd: Re: sum data from data.frame in a matrix
Hi Dennis, Thanks for your quick response and sorry for not being clear. That helped, but I need an actual matrix of e.g., 12 x 12 and those functions give me a matrix with only the "filled" locations. I need a 12 by 12 matrix with sums (0 if there's not data and the actual sum where there is) as follows: 1 2 3 4 5 6 7 8 9 10 11 12 1 0 0 0 . . . . . . 0 0 0 2 0 0 0 . 3 0
2010 Oct 04
3
can't find and install reshape2??
Hi everyone, I’m trying to install reshape2. But when I click on “install package” it’s not coming up!?!?! I’m getting reshape, but no reshape2? I’ve also tried download.packages(reshape2, destdir="c:\\") & download.packages(Reshape2, destdir="c:\\")…but no luck!!! Does anyone have any ideas what could be going on? Chris Howden Founding Partner Tricky
2013 Feb 03
1
problem in installing reshape2 (urgent)
Dear R users, In order to install reshape2 package, I gave the following command: install.packages("reshape2",dep=TRUE) However, it is not getting installed. The message that I am getting is: Warning: dependencies ‘plyr’, ‘stringr’, ‘testthat’ are not available trying URL ' http://ftp.ctex.org/mirrors/CRAN/src/contrib/reshape2_1.2.2.tar.gz' Content type
2012 Jul 25
2
reshape -> reshape 2: function cast changed?
Hi, I used to use reshape and moved to reshape2 (R 2.15.1). Now I tried some of my older scripts and was surprised that my cast function wasn't working like before. What I did/want to do: 1) Melt a dataframe based on a vector specifying column names as measure.vars. Thats working so far: dfm <- melt(df, measure.vars=n, variable_name = "species", na.rm = FALSE) 2) Recast the
2011 Dec 23
2
cast in reshape and reshape2
> library(reshape2) > x = melt(airquality, id=c('month', 'day')) With reshape I can cast with multiple functions: > library(reshape) > cast(x, month+variable~., c(mean,sd)) month variable mean sd 1 5 ozone 23.615385 22.224449 2 5 solar.r 181.296296 115.075499 3 5 wind 11.622581 3.531450 4 5 temp 65.548387
2017 Jul 05
0
Help with reshape/reshape2 needed
This does not use reshape/reshape2, but it is pretty straightforward. Assuming X is your example data: > Y <- split(X[, 2], X[, 1]) > vals <- sapply(Y, length) > pad <- max(vals) - vals > Y2 <- lapply(seq_along(Y), function(x) c(Y[[x]], rep(NA, pad[x]))) > names(Y2) <- names(Y) > X2 <- do.call(cbind, Y2) > X2[, 1:6] 1957 1958 1959