similar to: Removing -Inf values from all the colums in a dataframe

Hi, I have a dataframe with 14319rows and 9 colums. for some rows there are null values.I want a dataframe without these null values.I wanna select only those that have values !=NA. kindly let me know how to do that. Ramya -- View this message in context: http://www.nabble.com/selecting-dataframe-values-that-are-not-nulls-tp19537093p19537093.html Sent from the R help mailing list archive at

Hi, I have a Dataframe. A B C D 0.1 0.7 0.9 0.8 0.20 0.60 0.80 0.70 0.40 0.80 0.70 0.76 I need a resultant dataframe (A-B) (C-D) -0.6 0.1 -0.40 0.1 -0.40 -0.06 Any suggestion would be of a great help Thanks Ramya -- View this message in context: http://r.789695.n4.nabble.com/Finding-a-Diff-within-a-Dataframe-columns-tp3247943p3247943.html Sent from

Hi there I have two dataframes Dataframe_1 column_1 colum_2 121 12345 145 1675 167 2765 Dataframe_2 column_1 column2 121 abc 345 lmn 167 efg I want a resulting dataframe 121 12345 abc 167 2765 efg how do i go abt it Ramya -- View this message in context: http://n4.nabble.com/Dataframe-help-tp947934p947934.html Sent from the R

hi there I have a dataframe abc 123 345 abc 345 456 lmn 567 345 hkl 568 535 lmn 096 456 lmn 768 094 i want the uniques of column 1 and there corresponsing column 2 and 3 output abc 123 345 lmn 567 345 hkl 568 535 cbind(DF1[,1],DF1[which(unique(DF1[,1]),c(2,3)]) but didnt work kindly let me know how to go abt it ramya -- View this message in context:

Hi there, I have a dataframe length.unique.info > length.unique.info abc 12 345 def 16 550 lmn 6 600 I want those names that fall under the condition (length.unique.info[,2][i] <=5 && length.unique.info[,3][i] >=500) abcder<-length.unique.info[which(length.unique.info[,2][i] <=5 && length.unique.info[,3][i] >= 500),1] will "&&" look for

Geneset_name #Chromosome #Hit_in_Biomart original_geneset_len Missing.genes [1,] "AGUIRRE_PANCREAS_CHR12" "1" "51" "59" "8" [3,] "AGUIRRE_PANCREAS_CHR9" "1" "24" "24"

Hi there I have two object on is a vector T and the other is dataframe C. vector T has more no of rows when comapred with a dataframe Ccolumn[,2].I want to find the the missing rows in dataframe C.That is those values that are not matchig in dataframe C[,2] Kindly give me suggestion on how to go about it. Ramya -- View this message in context:

hi I have vector test. It has 3 elements. I want to join the three into one vector. "Geneset=HSA04910_INSULIN_SIGNALING_PATHWAY-157- 20". how can i do it. > class(test) [1] "character" > test [1] "Geneset=HSA04910_INSULIN_SIGNALING_PATHWAY" "157" [3] "20" Ramya --

I have a dataframe D.F1 >dim (D.F1) 14351 9 This dataframe has values and for some 1000 rows it holds NULL values.I hace found the missing values for about 500 and have those in another dataframe D.F.sub.2 >dim(D.F.sub.2) 500 9 as dataframe is a subset of D.F1 the coulmn 1 in D.F.sub.2 is a subset of D.F1.I have to insert the values in D.F1 in other fields while the coulmn 1 in both

hi there, I want to write the plots in the pdfs and the details about the graph in a seperate notepad. plot(as.numeric(lapply(resultgenes,length)), main= "Geneset.gene#.bias.test",xlab="Top.Ranked.Genesets", ylab="gene.number.per.geneset") lines(loess.smooth(c(1:1000),as.numeric(lapply(resultgenes,length)), span = 2/3, degree = 1, family =

Hi, I have a list(A1) of dataframe and a vector containing a 22 list names. list(A1) abc l m n p q r dce e g h l k m kpo a d c also i have a vector of list names. abc,dce similarly i have 22 elements. I wanna delete or want a list without the list elements whoes name match up the vector. my result should be kpo a d c. i tried lapply it is in working in the way i want. Kindly help me

hi, I need to remove the list that does not have any values.Do suggest me the way to do it. result<- list() > head(result) [[1]] [,1] [,2] [,3] [[2]] [,1] [,2] [,3] [[3]] [,1] [,2] [,3] [[4]] [,1] [,2] [,3] [[5]] [,1] [,2] [,3] [1,] "HIGD1C" "SNP_A-2058537" "4" [2,] "HIGD1C" "SNP_A-1955347"

hi there, Is there any function to append the pdf file. I want to write in a pdf file some 100 plots(in one single pdf containing 100 plots) while all the plot are created using a for loop. I can create 100 pdf one for each for each plot using a for loop but i want only one pdf with 100 plots. Ramya -- View this message in context:

Hi there I just want to add 2 to all the values in dataframe. I tried using sapply but it seem to die all the time. Any help would be appreciated. Thanks Ramya -- View this message in context: http://r.789695.n4.nabble.com/Adding-a-numeric-to-all-values-in-the-dataframe-tp3537594p3537594.html Sent from the R help mailing list archive at Nabble.com.

Hi there I have a string like this i want to extract 9831019 from this string i used a regular expresion \d+ by which i can only make it to see 7 and returns. This type of number(9831019) appears in any part of the string and is definitely more than 5 digits all the time and i want to give that as a condition UV7C11-F9-E1 MCS#9831019 MCS Lot #9512516" how do i go abt it Ramya -- View

http://r.789695.n4.nabble.com/file/n3312061/x_and_y_values.txt x_and_y_values.txt I have the absorbance values form HPLC Chromatogram. I need to find the peaks in datapoints and area under each peak. I am not sure how how to find the peaks, I tried couple of libraries and peak function but they return me a list of values which when computed from area turns out to be huge nnumbers. In the

hi, I have a data stored in table format. The data is stored in the name map. 500545 rows and 3 columns. I want to use a for loop to scan through till the end of the row. can i use like this. for ( i in 1:row(map) { } Kindly clarify me Cheers Ramya -- View this message in context: http://www.nabble.com/R-help-on-for-loop-tp18098661p18098661.html Sent from the R help mailing list archive

hi I want to compare two list by its names and get the values of that list. can anybody let me know the syntax of comparing the list by their names using a for loop c.genes<- list() for(i in 1:100) c.genes[[1]]<- geneset(which(geneset == tobecampared[i])) } here geneset is a list and also tobecampared is a list Thank you Ramya -- View this message in context:

hi, I have list of length 5453 and vector of length 14318.I need to compare the vector with the list and return the list name if matched.I am thinking of using an lapply but how to retrive the listname is wat i am puzzled abt. kindly let me know how to go abt it. Ramya -- View this message in context:

hi there, I have a list of list objects i need to remove the top layer [[1]] [1].0 "ABC" "DEF""LMN" [1].1 "WER" "ERT" "TRY" [[2]] [2].0 "ASD","wer""qwe" [2].1 "wdv""ghj""ggj" I wanna avoid the top layer...that is [[1]] [[2]] shouldnt be there just a simple list is wat i need.