similar to: using popbio, reduce number of digits in image2 plot

Hello, I'm in need of running a PVA and want to load {popbio}. However, I can't find it. I can't see where or how to load it. I have added repositories and changed the CRAN mirror site. I see {polynom} and {popgen} but no {popbio} between. What am I doing wrong? Thanks, Michelle [[alternative HTML version deleted]]

Hello R users, I am trying to calculate the stochastic lambda for a published matrix population model using the popbio package. Unfortunately, I have been unable to match the published results. Can anyone tell me whether this is due to slightly different methods being used, or have I gone wrong somewhere in my code? Could the answer be as simple as comparing deterministic lambdas to

Hello, I am trying to use the projection.matrix( ) function and am following the example given. I have my data formatted very similar to the test.census example. > str(AsMi05mat) `data.frame': 1854 obs. of 6 variables: $ Tag : num 501 502 503 504 505 506 507 508 509 510 ... $ Year : int 1995 1995 1995 1995 1995 1995 1995 1995 1995 1995 ... $ Length : num 34

Dear all, I am running matrix population models using package "popbio". In a deterministic model {i.e., transition matrix is defined as A <- matrix(c(0.70, 0.70,0.35,0.50), nrow=2,byrow=TRUE}, population growth rate can be estimated from the dominant eigenvalue {command "eigen.analysis"}. However, I cannot figure out the way to compute the asymptotic stochastic population

Hello, I am running the plot from countCDFxt (popbio). I would like to report the y-axis as a percent instead of the log scale (e^01...). I can add an axis with axis(2, 0:1, line =2) but I'm having trouble understanding how to assign the tic marks (with 'at ='). I'd like to tell it to make tics with the percent value (or decimal if that's my only option) at the equivalent of

I am using the function logi.hist.plot in package popbio. I want to change the colour of the probability line from the default red to black. I have not been able to find out how to do that. [[alternative HTML version deleted]]

Dear R-users, I would like to calculate elasticities and sensitivities of each parameters involved in the following transition matrix: A <- matrix(c( sigma*s0*f1, sigma*s0*f2, s, v ), nrow=2, byrow=TRUE,dimnames=list(stage,stage)) The command "eigen.analysis" avaliable in package "popbio" provides sensibility matrix and elasticity matrix

Dear R users I want change the entries in a matrix. I did a matrix A=0 1 5 .3 0 0 0 .5 0 A1<-A A2<-A*0.90 A2 1 2 3 1 0.00 0.90 4.5 2 0.27 0.00 0.0 3 0.00 0.45 0.0 I need replace elements one by one in a loop I tried the following using package POPBIO, total <-matrix(0, nrow=5, ncol=60) for(i in 1:10){ A1<-A A1[1,2] <- A2[1,2]

Hi all, I need to plot two intersecting planes in a graph. Using persp() function (see code below) I am not able to add a second plane with good results. I tried with par(new=TRUE) but the output was very poor. I have found some previous discussions about this point but (apparently) without a clear solution. Any advice would be appreciated. Simone Tenan ################## library(popbio)

Hello, I am trying to create multiple matrices (to run a PVA) but can't import all of them from a .csv without the numbers treated as labels and not factors. I can enter the matrix slowly: Site05_96 <- matrix(c(0.07,0,0.03,0.00,NA,0.00, 0.09,0.166666667,0.31,0.42,NA,0.00, 0.00,0,0.00,0.00,NA,0.00, 0.00,0,0.00,0.00,NA,0.00,

> On Nov 5, 2017, at 6:03 AM, G?ran Bergqvist <Goran.Bergqvist at jagareforbundet.se> wrote: > > I am using the function logi.hist.plot in package popbio. I want to change the colour of the probability line from the default red to black. I have not been able to find out how to do that. If you look at the code for that function you see this line: logi.curve <-

hello all, i'm trying to use QPmat, from the popbio package. it appears to be based on solve.QP and is intended for making a population projection matrix. QPmat asks for: nout, A time series of population vectors and C, C constraint matrix, (with two more vectors, b and nonzero). i believe the relevant code from QPmat is: function (nout, C, b, nonzero) { if (!"quadprog" %in%

useR's, I have several matrices of size 4x4 that I want to calculate means of their respective positions with. For example, consider I have 3 matrices given by the code: mat1 <- matrix(sample(1:20,16,replace=T),4,4) mat2 <- matrix(sample(-5:15,16,replace=T),4,4) mat3 <- matrix(sample(5:25,16,replace=T),4,4) The result I want is one matrix of size 4x4 in which position [1,1] is the

https://bugs.freedesktop.org/show_bug.cgi?id=28095 --- Comment #15 from Brent <bzipitidoo at hotmail.com> --- Yes, someone else said that hardware was unusual. But Nouveau did work with it, at elast somewhat, in the later 2.6 kernels. If it helps at all, the Diamond Viper V550 video card reports a version of 1.93E during POST. Tried older versions of Puppy Linux, and ran into other

Greetings- I recall mention of this bug at some tim elast year, but do not know if anything yet has been done to address it or if it is in any plans... I have multiple servers behind a f/w. I have ports forwarded on the f/w which map to port 22 on the various servers. i.e. ssh -p1001 FIREWALL_IP ---> NON_ROUTEABLE:22 This is fine, but the hostkey negotiation obviously fails... Is