similar to: ggplot2 - ribbon

Hi, I'm trying to plot a longitudinal data set, using ggplot and adding some summary info (eg. mean, 1 sd bounds) using geom=ribbon. The summary info is based on a subset of the original data (eg. less an outlier). But I'm having trouble getting the ribbons to show up correctly. It's probably something obvious that I'm missing as a novice at ggplot2, and any help is much

Hi, I would like to plot a bunch of tree ring width data (time series) using ggplots, but I'm having trouble figuring out how to do it. My data is in a data.frame, with years as rownames and a distinct tree ring series in each column. So, something like this: rwl<-matrix(rnorm(800), nrow = 100) colnames(rwl) <- paste('V', 1:8, sep = '')

Dear all, I produced the following graph with ggplot which is almost fine, yet I don't like that the legend for "Means" and "Observations" includes a line, though no line is used in the plot for those two (the line for "Overall Mean" on the other hand is wanted): library(ggplot2) ddf <- data.frame(x = factor(rep(LETTERS[1:2], 5)), y = rnorm(10)) p <-

Hi R fans, As a newbie following the five-hour rule (after hitting my head against the wall for five hours, post to this list), I am appealing for some help understanding geom_rect() in ggplot2. What I want to do is very simple. I want to generate a plot of rectangles. Each one represents a business cycle. The x-values will be pairs representing the start and end of each cycle. The y-values

plot.hclust: Setting up a window for a dendrogram assumes the first link is the shortest and the last is the longest. This is not always the case when the clustering was done with hclust, method="median" or method="centroid", and the dendrogram sometimes doesn't fit within the window. I propose the fix listed below. src/main/ --- plot.c Wed Sep 17 01:03:39 2003 +++

Dear R-ers, I hope there is a really simple solution to my problem. I've written a function that I saved in an .r file. I source this file in my code. For a while it worked fine. But then when I run the line: source("F mylineplot.r") I started getting a warning: In readLines(file) : incomplete final line found on 'F mylineplot.r' I have no idea why - I tried to check and

Hello I have created a graph using the following commands: <<< startBReP3O1T <- diffs$BReP3O1T - diffs$diff_BReP3O1T endBReP3O1T <- diffs$BReP3O1T x <- seq(47,89, length = 10) ymin <- min(min(startBReP3O1T), min(endBReP3O1T)) ymax <- max(max(startBReP3O1T), max(endBReP3O1T)) y <- seq(ymin, ymax, length = 10) plot(x,y, type = 'n', xlab = 'Age', ylab =

I have a xml exported by Manifold GIS but I'm not being able to import it into R using XLM package. The file have this structure: <?xml version="1.0" encoding="UTF-8" ?> - <layout> <name>Layout 2</name> <pagesByX>1</pagesByX> <pagesByY>1</pagesByY> - <elements> <legend

I would like to draw horizontal or vertical lines on a heatmap to highlight the clusters at some specified cut depth of the dendrogram. As a hacked example, the following code would work if I could set the coordinates of the top and bottom of the false color image correctly (ymin and ymax), but the correct values seem to depend on the output device and its size. I realize that heatmaps use a 2x2

Hello All: Can anybody tell me what is the problem with my program please. I have an error message as appears below. My program is: ifn <- "Jul08_09.LM" data <- read.table(ifn) ofn <- "Jul.png" bitmap(ofn, type = "png256", width = 30, height = 30, pointsize = 30, bg = "white",res=50) par(mar=c(5, 5, 3, 2),lwd=5)

Dear All, I have this script: dat <- data.frame(Month = hstat$Date,C_avg = hstat$C.avg,C_stdev = hstat$C.stdev) ggplot(data = dat, aes(x = Month, y = C_avg, ymin = C_avg - C_stdev, ymax = C_avg + C_stdev)) + geom_point() + geom_line() + geom_errorbar() dat <- data.frame(Month = hstat$Date,K_avg = hstat$K.avg,K_stdev = hstat$K.stdev) ggplot(data = dat, aes(x = Month, y = K_avg,

Hi Put fill outside aes p+geom_ribbon(aes(ymin = slope_1*x + intercept_1 - 1/w[2], ymax = slope_1*x + intercept_1 + 1/w[2]), fill = "blue", alpha=0.1) The "hole" is because you have two levels of data (red and blue). To get rid of this you should put new data in ribbon call. Something like newdat <- trainset newdat$z <- factor(0) p+geom_ribbon(data=newdat, aes(ymin =

Hello, I'm attempting to plot error bars side by side rather than stacked on top of each other with ggplot2. Here is the sample code I am using: #Code #Data spd<-c("s","f","f","s","f","s","s","s","f","f","s","f") r<-c(4.9,3.2,2.1,.2,3.8,6.4,7.5,1.7,3.4,4.1,2.2,5)

Hola a tod en s, bueno, un poco al hilo de un mensaje anterior, reformulo la pregunta y pongo código completamente reproducible, a ver si hay más suerte. Estoy con un informe y hay que hacer algunos gráficos con datos diferentes con ggplot2, y hay que poner el mismo tamaño para todos ellos. El problema es que R cambia automáticamente el tamaño del área de trazado y el margen en función de

Hi everyone, it looks like geom_ribbon removes missing values and plots a single ribbon over the whole interval of x values. However, I'd rather want it to act like geom_line, that is, interrupt the ribbon for the interval of missing values and continue once there are new values. Here's an example: library(ggplot2) df <- data.frame( date = seq(from = as.Date("2010-05-15"),

Greetings! I would like to be able to specify a fixed (say) lower limit for plotting, while leaving the upper limit "floating, when plotting. The context is that the maximum in the data to be plotted is unpredictable, being the consequence of a simulation, whereas I know that it cannot be less than (say) 0; and I want to fix the lower limit at 0 in any plot, leaving the upper limit to be

G'day Thomas, On Sat, 12 Aug 2023 04:17:42 +0000 (UTC) Thomas Subia via R-help <r-help at r-project.org> wrote: > Here is my reproducible code for a graph using geom_smooth The call "library(tidyverse)" was missing. :) > I'd like to add a black boundary around the shaded area. I suspect > this can be done with geom_ribbon but I cannot figure this out. Some >

Consider the following situation: we have quantified algal concentrations for a variety of species using many samples at each of three years. It seems to make sense to generate a line plot (matplot-like), with each species plotted as a separate line, with the points connected to emphasize the temporal pattern. The problem: lots of overlapping error bars. The question: from both a

I've wrote some code to simulate a random walk in 2 dimensions on a lattice. Basically I want to add something in to make it plot it point by point so you can see what is going on. Heres my code for the random walk in 2d RW2D<-function(N) { i<-0 xdir<-0 ydir<-0 xpos<-vector() xpos[1]<-xdir ypos<-vector() ypos[1]<-ydir for (i in 1:N-1)

Buenas, una pregunta. Si yo estoy calculando un modelo lineal, el caso más simple, 1 variable respuesta y una variable explicativa y creo un modelo, me da un R2 del 80% y quiero ver como es esa relacion entre las variables, para calcular el error de predicción del modelo, basta con ver el intervalo de confianza del modelo e irme a los extremos? Por si no me he expresado bien, un ejemplo tonto: