similar to: visualize TukeyHSD results

Hi for each measurement day we use "lme" for our four repetitions. Now it would be great if we can represent the error too. The following seems to be good. Unfortunately, there is not the full example source code. Maybe someone has done it before. (from http://anthony.darrouzet-nardi.net/scienceblog/?p=406 ) "Finally, here's a graph of the results for the ammonium data,

Rails and Ruby People, I have some data which I want to present to my end-users. The data is structured as a simple tree-like thing. I could easily render it as a well structured YAML file. I''m looking for a class or module which generates elegant looking HTML from a YAML file. I''m about to wander around in rubyforge in search of such a utility. Alert me if you know of

Dear All, I need to do something simple: I have a set of points which are located on the surface of a sphere (let's say the centre of the sphere is in (0,0,0) and the sphere has radius R=1). How can I visualize them? I am looking for something like this http://bit.ly/PnSerU with the addition of some spots that represent some points I want to plot on the sphere surface. Any suggestion

Hi, I am trying to fit a line in the log plot of my networks degree distribution to show that it is a power-law distribution. I am using the following commands. However, I am not able to see the fitted line. Any comments to help? I am using following packages: igraph, splines,base,VGAM, netmodels. g is my network, d is the degree of nodes in the network, and dd is the degree distribution d

Hi, On 02/24/2013 06:39 PM, Paul Sokolovsky wrote: > Hello, > > LLVM provides several ways to visual IR structure straight in its core - > Function::viewCFG() to render control flow graph, then -view-* options > to llc to render various stages of transforming to machine code. > However, I wasn't able to find a way to render complete DAG > visualization of normal IR -

I am trying to make my application run on wine first of all I'm running Ubuntu 10.04 and wine 1.2, I did an override to native gdiplus.dll in order to let the graphical compontents of my app run "properly". I also installed odbc client using this procedure http://wiki.winehq.org/NativeOdbc in order to use the mssql database. I tried to run this with or without compiz, and result is

Hello all I would like to visualize the hazard ratios of a cox proportional hazards model. I have seen some good examples in the New England Journal of Medicine: http://content.nejm.org/cgi/content/short/353/26/2747/F3 http://content.nejm.org/cgi/content/short/350/26/2654/F2 (I hope these are open access, but I am not sure) And something similar in the book 'R Graphics' by Paul

Hi there, I am looking for R-packages that can help me visualize properties on nucleotide sequences. I want to display sequences in the 1-100K base range as lines and plot features above and below those lines. Any ideas would be welcome. Thanks, Bernd

Dear all, I am working with randomForest package and I am interested in examining the "Gini importance" measures that are used as a general indicator of feature relevance. Is there a possibility of getting the Gini measure that is being estimated in each tree by the output of the getTree() function? Thanks a lot, Chrysanthi [[alternative HTML version deleted]]

Hello all, I happen to get a (legitimate) hold of a city budget for the (4) years: 2006,2007,2008,2009 The budget holds over 12,000 rows of budget sections with numbers being Zero's positive and negatives. I would like to find something "interesting" in this dataset. I don't have a clear definition of what this "interesting" might be, nor how to find it. But my aim

Hello, LLVM provides several ways to visual IR structure straight in its core - Function::viewCFG() to render control flow graph, then -view-* options to llc to render various stages of transforming to machine code. However, I wasn't able to find a way to render complete DAG visualization of normal IR - which besides CFG would also show dataflow (and other flows, if any). What people use to

Hi all, How do I visualize a contour of a tri-variate normal distribution? I just like to see the ellipsoid very much. I hope there is a easy way or existing method in R. Thank you a lot! Michael. [[alternative HTML version deleted]]

I am looking at a data set containing two variables (x,y), each of which represents relative frequencies (rounded): data.frame(x = c(0.1,0.6,0.2,0.1), y = c(0.5,0.2,0.2,0.1)) x y 1 0.1 0.5 2 0.6 0.2 3 0.2 0.2 4 0.1 0.1 each of the rows reflects a "relation" between x and y, for example in row 4: 10% of the observations in x account for 10% of the observations in y. I

Hi Paul, On 02/24/2013 08:54 PM, Paul Sokolovsky wrote: > Hello, > > On Sun, 24 Feb 2013 19:15:27 +0100 > Sebastian Dreßler <dressler at zib.de> wrote: > > [] > >> For a project involving a tree data structure, we created a graph for >> representing IR for further analysis. I attached an excerpt of such a >> graph to give you an idea. If it helps,

Hello, I'm currently using a simple plot to visualize some mean values. I'm having ~200 datapoints on the x-axis, each has 10 records. I'm currently plotting only the mean value of each of the datapoints. What I need is a way to visualize the quartiles/error/whatever of these points. I thought about boxplots, but I have to many points on the xaxis - it would be impossible to see

http://r.789695.n4.nabble.com/file/n4630909/pfaff_fig1.gif I have run the statistics and found no significance in my pairwise t test. I want to create a graph similar to the one I included showing similar slopes/lines for my data points. For my data a correlation graph is not appropriate and looks very confusing. Is the easiest way to create several lines between points I enter manually or is

I would like to know if you have any suggestions how to visualize the results from a paired t-test (see the example data below). I tried to produce plots that show the mean and CI's from the original data and the estimate of the difference between means and the confidence intervals (see below) from the t-test. I really don't know what would be the best way to graphically display the

Hello, On Sun, 24 Feb 2013 19:15:27 +0100 Sebastian Dreßler <dressler at zib.de> wrote: [] > For a project involving a tree data structure, we created a graph for > representing IR for further analysis. I attached an excerpt of such a > graph to give you an idea. If it helps, we will see how to proceed ;) Well, after grepping LLVM source for apparent lack of it and googling for

Hi All, I am wondering if their is a convenient way to export the results of the TukeyHSD function to Word or Excel. I have used capture.output(tukey.contrast, file="tukey.contrast.xls") and this works, but the data are not in a table form, and so it is sort of a pain to manipulate the output. I have be unable to find a more convenient way and any assistance would be greatly