similar to: Can Sweave be instructed to use the cairo graphics device?

Dear all, The documentation on the function open3d in the rgl package, reads: open3d opens a new rgl device, and sets the parameters as requested. I want the new rgl device (window) to be sized and positioned in a specific place on my screen. So, I try to set the "windowRect" parameter as follows: > library("rgl") > open3d(windowRect=c(100,100,500,500))

Hi all, I use the excellent packages rjags and cacheSweave, and unfortunately seem to have found an incompatibility between them. Below are a minimal .Rnw file and corresponding JAGS model file which illustrate the problem: *** JAGS model file; name=j.bug *** model { mu ~ dnorm(0,1.0E-5) sigma ~ dunif(0,100) for(i in 1:length(y)) { y[i] ~ dnorm(mu,sigma) } } *** *** .Rnw

Dear R devel, being constrained to a windows environment at work and having colleagues being accustomed to the Microsoft Office Suite, I was looking for a way to have the RweaveLatex driver for Sweave automatically generating 'win.metafile's in addition to the pdf graphics. Without this functionalilty, the generation of emf-graphics is quite laborious, I think: <<>>= plotit

Hi R users, Does anyone know how to change the size of 3d charts? I'm using surface3d in rgl package, opening a new window each time to display the chart. I want it so that the chart fills the whole window, because when I output it to png, I don't want all the white space around the chart (right now, i'm getting this white "border" around the chart because the chart is

I'm interested in doing multinomial logistic regression with equality constraints on some of the parameter values. For example, with categorical outcomes Y_1 (baseline), Y_2, and Y_3, and covariates X_1 and X_2, I might want to impose the equality constraint that \beta_{2,1} = \beta_{3,2} that is, that the effect of X_1 on the logit of Y_2 is the same as the effect of X_2 on the

Hi, When using splom() in the lattice package, I would like to be able to access the row and column number of each individual pairs plot , similar to the way that current.row() and current.column() can be used in other lattice plotting functions such as xyplot. For example, I would like to be able to write something along the lines of library(mvtnorm) library(lattice) y <-

I'm interested in writing a function that constructs a new plot on the current graphics device if no plot exists there yet, but adds lines to the existing plot if a plot is already there. How can I do this? It seems to me that the exists() function might be co-opted to do this, but it's not obvious how. Many thanks, Roger -- Roger Levy Email: rlevy at ucsd.edu

Hi, I'm new in Latex and I'm trying to include an R chart into a Latex document. This is what I'm doing: 1) In R: save the chart as a a Postcript in a folder C:/xxx/Density.eps 2) In Latex (using TexWorks on windows xp) : In the preambule: \documentclass[11pt]{article} \usepackage{graphicx} \begin{document} blah..blah…blah \begin{figure} \centering

Hi, I'm trying to write a general-purpose "lexicon" class and associated methods for storing and accessing information about large numbers of specific words (e.g., their frequencies in different genres). Crucial to making such a class practically useful is to get hashing working correctly so that information about specific words can be accessed quickly. But I've never really

Hello list, despite I already posted a mail on this topic on R help, I guess this place may be more appropriate. I'll make it shorter this time. Sorry for posting twice. I found that using pixmap pictures in a Sweave document was sometimes almost impossible, due to the huge size of the pdf pictures produced. The first solution I found was to save pictures in png, when too heavy in pdf.

Hi, I'm trying to realise a repport with R and Latex (TeXnicCenter and Miktex for Windows) using Sweave(). I'd like to save my plots in a given size. How can I do that ? The code is : \SweaveOpts{prefix.string = figs/plot, eps = FALSE, pdf = TRUE} <<partI, echo=FALSE ,fig=TRUE, include=FALSE>>= plotFunction() @ \includepdf[pages=-]{figs/plot-partI} When I use

Dear all Are LaTeX \subfloat{} commands incompatible with Sweave code? I cannot get the following code to compile properly: \begin{table} \subfloat[asdfa]{<<>>= 2+2 @ } \caption{asdf} \end{table} If I replace the Sweave chunk with a random string or a table, the compilation works fine. Any ideas what happens? I hit the same trouble when running the code chunks through knitr.

This may be asking too much, but I'm wondering if anyone has a solution (even a hack) for creating multiple (overlay) plots in an Sweave file and post-processing the overlays in beamer appropriately. For example, suppose I have a series of figure blocks in my .Rnw file: <<plot1,fig=TRUE>>= [stuff] @ <<plot2,fig=TRUE>>= [stuff] @ <<plot3,fig=TRUE>>=

Dear R-users I am trying to understand how Sweave works by running some simple examples. In the example I am working with there is a chunk where the R-commands related to plotting a figure are placed. When running R CMD Sweave ? , pdflatex the output is a portrait figure. I wonder whether it would be possible to change the orientation to landscape (not in the latex file but in Rnw file). Many

Does anybody have a workable system to run an Rnw document through R-Sweave when necessary, but to just run it through LaTeX if no new R calculations are needed? I.e., the figures already exist, I do not need R to do more work for me, so I send the document straight to LaTeX. I want to leave open the option that I might need to run the document through Sweave in the future, so I don't want

Hi In Sweave, how does one change the size of the plots? I tried using a hook: <<echo=FALSE, print=FALSE, fig=TRUE>>= options(SweaveHooks=list(fig=function() ps.options(width=1))) library(graphics) pairs(iris) @ but this didn't change the size of the figure. How to make the figures a different size? -- Robin Hankin Uncertainty Analyst National Oceanography Centre,

Sometimes you want to compute the physical size of a plot based on data. In R itself this is no problem. But is there a way to compute the values of height and width in S-weave, say: <<graph,fig=TRUE,height=xx,width=yy>>= where xx and yy are computed and not physically written in the document? Bendix ______________________________________________ Bendix Carstensen Senior

Hi Folks, I'm surprised, but I didn't find this question addressed anywhere. I'd like to generate a LaTeX caption with R code. I've tried the code below, but I get the following TeX error: ! Argument of \@caption has an extra }. <inserted text> \par l.21 } Any thoughts? Perhaps I'll have to write the "\caption{}" text with R? thanks!

Hi all: I'm trying to create some side by side dynamic graphics on the same page but I am running into some problems. I am able to create side by side figures only if I import them into my PDF. see the example bellow: \documentclass[12pt]{article} \usepackage{color,cite,graphicx}% to put in axodraw \usepackage{latexsym,amssymb,epsf} \begin{document} %Import two figures side by side. Please

Dear R users, I am using Sweave. I would like to use the width option for the graphics : \begin{figure}[h!] \centering \includegraphics[width=0.7\textwidth]{x} \end{figure} How do I get this ? Thank you very much, Randall [[alternative HTML version deleted]]