Displaying 20 results from an estimated 800 matches similar to: "How to iterate through different arguments?"
2010 Oct 17
4
how to convert string to object?
temp = "~aparch("
temp1 = paste(temp,1, sep = "")
temp2 = paste(temp1,1, sep = ",")
temp3 = paste(temp2, ")",sep = "")
temp 3 is a character but I want to convert to formula object. How do I do
this?
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2010 Nov 03
2
How to unquote string in R
s= "Hey"
a = "Hello"
table = rbind(s,a)
write.table(table,paste("blah",".PROPERTIES",sep = ""),row.names =
FALSE,col.names = FALSE)
In my table, how do I output only the words and not the words with the
quotations?
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2006 Sep 12
4
variables in object names
Is there any way to put an argument into an object name. For example,
say I have 5 objects, model1, model2, model3, model4 and model5.
I would like to make a vector of the r.squares from each model by code
such as this:
rsq <- summary(model1)$r.squared
for(i in 2:5){
rsq <- c(rsq, summary(model%i%)$r.squared)
}
So I assign the first value to rsq then cycle through models 2 through
2009 Mar 09
1
lme anova() and model simplification
I am running an lme model with the main effects of four fixed variables (3
continuous and one categorical – see below) and one random variable. The
data describe the densities of a mite species – awsm – in relation to four
variables: adh31 (temperature related), apsm (another plant feeding mite)
awpm (a predatory mite), and orien (sampling location within plant – north
or south).
I have read
2008 Nov 25
4
glm or transformation of the response?
Dear all,
For an introductory course on glm?s I would like to create an example to show the difference between
glm and transformation of the response. For this, I tried to create a dataset where the variance
increases with the mean (as is the case in many ecological datasets):
poissondata=data.frame(
response=rpois(40,1:40),
explanatory=1:40)
attach(poissondata)
However, I have run into
2010 Sep 29
1
Understanding linear contrasts in Anova using R
#I am trying to understand how R fits models for contrasts in a
#simple one-way anova. This is an example, I am not stupid enough to want
#to simultaneously apply all of these contrasts to real data. With a few
#exceptions, the tests that I would compute by hand (or by other software)
#will give the same t or F statistics. It is the contrast estimates that
R produces
#that I can't seem to
2005 Mar 01
3
packages masking other objects
hello all,
I am trying to use the function getCovariateFormula(nlme) in conjunction with the library lme4. When I load both packages I get the following message and the getCovariateFormula function no longer works:
library(nlme)
library(lme4)
Attaching package 'lme4':
The following object(s) are masked from package:nlme :
contr.SAS getCovariateFormula
2005 Jul 15
1
nlme and spatially correlated errors
Dear R users,
I am using lme and nlme to account for spatially correlated errors as
random effects. My basic question is about being able to correct F, p, R2
and parameters of models that do not take into account the nature of such
errors using gls, glm or nlm and replace them for new F, p, R2 and
parameters using lme and nlme as random effects.
I am studying distribution patterns of 50 tree
2010 Oct 07
1
how to convert list to language object
If I have a list:
list = c(~garch(1,1), ~arma(1,1)) and I run
typeof(list[1]), the output is a list object. But I want each element in the
list to be a language object. How do I transform these list objects to
language objects?
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2010 Mar 28
1
keeping track of who did what
hello everybody.
i need to log "who did what" on some models. i was reading recipe 59
of rails recipes and i created something like that:
class LogSweeper < ActionController::Caching::Sweeper
observe :model1, :model2, :model3, :model4, :model5, ...
after_save(model)
save_log(model, "save")
end
after_destroy(model)
save_log(model, "destroy)
end
2011 Sep 28
2
GAMs in R : How to put the new data into the model?
I have 5 GAMs ( model1, model2, model3, model4 and model5)
Before I use some data X(predictor -January to June data) to form a equation
and calculate the expected value of Y (predictand -January to June). After
variable selection, GAMs (Model 1)were bulit up! R-square :0.40
NOW, I want to use new X'( predictor -July - December data) and put into
Model 1, then get the expected value of Y'
2009 Feb 09
1
gee with auto-regressive correlation structure (AR-M)
Dear all,
I need to fit a gee model with an auto-regressive correlation structure and I faced some problems.
I attach a simple example:
#######################################################
library(gee)
library(geepack)
# I SIMULATE DATA FROM POISSON DISTRIBUTION, 10 OBS FOR EACH OF 50 GROUPS
set.seed(1)
y <- rpois(500,50)
x <- rnorm(500)
id <- rep(1:50,each=10)
# EXAMPLES FOR
2007 Oct 17
1
problem with anova() and syntax in lmer
Dear R user
I have 2 problems with lmer.
The statistical consultance service of my university has recomended to me to
expose those problems here.
Sorry for this quite long message.
Your help will be greatly appreciated...
Gilles San Martin
1) anova()
I fit a first model :
model1 <- lmer(eclw~1 + density + landsc + temp + landsc:temp + (1|region) +
(1|region:pop) + (1|region:pop:family),
2008 Sep 12
1
Error in solve.default(Hessian) : system is computationally singular
Hello everyone,
I'm trying to estimate the parameters of the returns series attached using the GARCH code below, but I get the following error message:
Error in solve.default(Hessian) :
system is computationally singular: reciprocal condition number = 0
Error in diag(solve(Hessian)) :
error in evaluating the argument 'x' in selecting a method for function 'diag'
Can
Latin Hypercube Sampling when parameters are defined according to specific probability distributions
2017 May 27
2
Latin Hypercube Sampling when parameters are defined according to specific probability distributions
>May 26, 2017; 11:41am Nelly Reduan Latin Hypercube Sampling when parameters are >defined according to specific probability distributions
>Hello,
> I would like to perform a sensitivity analysis using a Latin Hypercube Sampling (LHS).
>Among the input parameters in the model, I have a parameter dispersal distance which is defined according to an exponential probability
2011 Apr 14
1
mixed model random interaction term log likelihood ratio test
Hello,
I am using the following model
model1=lmer(PairFrequency~MatingPair+(1|DrugPair)+(1|DrugPair:MatingPair),
data=MateChoice, REML=F)
1. After reading around through the R help, I have learned that the above
code is the right way to analyze a mixed model with the MatingPair as the
fixed effect, DrugPair as the random effect and the interaction between
these two as the random effect as well.
2012 Nov 08
2
Comparing nonlinear, non-nested models
Dear R users,
Could somebody please help me to find a way of comparing nonlinear, non-nested
models in R, where the number of parameters is not necessarily different? Here
is a sample (growth rates, y, as a function of internal substrate
concentration, x):
x <- c(0.52, 1.21, 1.45, 1.64, 1.89, 2.14, 2.47, 3.20, 4.47, 5.31, 6.48)
y <- c(0.00, 0.35, 0.41, 0.49, 0.58, 0.61, 0.71, 0.83, 0.98,
2008 Sep 05
2
using nls to fit a curve to data
Hi,
I am trying to fit a curve to data. My command line is:
model10=nls(offspring~((A*c^k)/gamma(k))*((degdays-alpha)^(k-1))*exp(-c*(degdays-alpha)),
start=list(A=30,k=2,c=.018,alpha=131))
I get the error message:
Error in numericDeriv(form[[3]], names(ind), env) :
Missing value or an infinity produced when evaluating the model
In addition: Warning message:
full precision was not
2004 Sep 01
1
sunspot data in R 2.0.0
I noticed this in the NEWS:
o Datasets 'sunspot.month' and 'sunspot.year' are available
separately but not via data(sunspot) (which is used by package
lattice to retrieve a dataset 'sunspot').
Now, the 'sunspot' dataset included in lattice was actually a mistake, I
realized later that I instead wanted the 'sunspots' data from
2007 Sep 07
5
unable to add IP address to eth0:0 eth0:1 etc
Hi all,
I need to (quickly!grrr) update IP addresses for which a given machine
will answer.
I did this:
/sbin/ifconfig eth0:0 xx.xx.xx.10 netmask 255.255.255.0
/sbin/ifconfig eth0:1 xx.xx.xx.11 netmask 255.255.255.0
/sbin/ifconfig eth0:2 xx.xx.xx.30 netmask 255.255.255.0
/sbin/ifconfig eth0:3 xx.xx.xx.31 netmask 255.255.255.0
/sbin/ifconfig eth0:4 xx.xx.xx.13 netmask 255.255.255.0