similar to: fftw upgrade?

Those of you who would like to see Centos on the supported-list for the clustering software OSCAR, head over to http://oscar.openclustergroup.org/register and cast your vote! Cheers, Morten -- Morten Kjeldgaard, Asc. professor, Ph.D. Department of Molecular Biology, Aarhus University Gustav Wieds Vej 10 C, DK-8000 Aarhus C, Denmark Lab +45 89425026 * Mobile +45 51860147 * Fax +45 86123178

I am a bit puzzled at the versioning scheme of the RedHat clone family. RedHat seems to use integer 4, Tao and Centos does the same. If you do rpm -q --qf '%{version}\n' -f /etc/redhat-release you get '4'. However, Scientific Linux uses 4.0, and that seems to me to be a more logical choise, since presumable there are going to be versions 4.1, 4.2, etc. Is there any good

Hi, I am having a strange problem, where I cannot get pam_access to work as intended. I have placed the following line in /etc/pam.d/system-auth account required /lib/security/pam_access.so Then, in /etc/security/access.conf, I have put the following line: -:mok:10.14.44.104 I.e. I should prevent myself from logging on from host 10.14.44.104. However, when I try to log on (using

From: Morten Kjeldgaard <mok at bioxray.dk> > I am a bit puzzled at the versioning scheme of the RedHat clone family. > RedHat seems to use integer 4, Tao and Centos does the same. If you do > rpm -q --qf '%{version}\n' -f /etc/redhat-release > you get '4'. > However, Scientific Linux uses 4.0, and that seems to me to be a more > logical choise, since

Upon fresh installation of R-patched and rimage on openSUSE 11.3 box, simple fftw on renown lena image cause memory free failure. Quick: Go to the end of this mail and read the error message from R Thoruogh: Find detailed step-by-step how sopprt library fftw2 was installed and how rimage was installed. Regards Mads Jeppe VERSIONS ======== openSUSE -------- # cat /etc/SuSE-release

I've looked through the archives and have seen that others had a similar problem: http://tolstoy.newcastle.edu.au/R/e2/help/06/09/0571.html I'm trying to install rimage and I get the following warning: ============================================ downloaded 323Kb * Installing *source* package 'rimage' ... checking for g++... g++ checking for C++ compiler default output... a.out

I'm trying to install rimage in R version 2.5.1 running on Fedora 6 (kernel 2.6.22.7-57.fc6 with the headers and gcc installed, along with fftw2 and libjpeg and headers): > install.packages("rimage") Warning in install.packages("rimage") : argument 'lib' is missing: using '/usr/lib/R/library' trying URL

Dear R people, I am trying to install rimage using install.packages("rimage") but am receiving the following errors despite having FFTW installed. I would appreciate any help to get this fixed. checking fftw.h usability... no checking fftw.h presence... no checking for fftw.h... no configure: error: Sorry, can't find fftw header ERROR: configuration failed for package

I'm still having problems installing rimage - the installation can't find the fftw headers. As suggested, I installed the fftw rpm (for RH 9 from freshrpms). It installed without any errors or warnings. Yet I get exactly the same error message - it can't find the fftw headers. What do I have to do to get the headers? Rick B.

On Jul 5, 2012, at 9:06 PM, Anthony Blake <amb33 at cs.waikato.ac.nz> wrote: > I've noticed that LLVM tends to generate suboptimal code and spill an > excessive amount of registers in large functions, such as in those > that are automatically generated by FFTW. One problem might be that we're forcing the 16 stores to the out array to happen in source order, which

On Sat, Jul 7, 2012 at 12:25 AM, Anthony Blake <amb33 at cs.waikato.ac.nz> wrote: > On Fri, Jul 6, 2012 at 6:39 PM, Jakob Stoklund Olesen <stoklund at 2pi.dk> wrote: >> On Jul 5, 2012, at 9:06 PM, Anthony Blake <amb33 at cs.waikato.ac.nz> wrote: >>> [...] >>> movaps 32(%rdi), %xmm3 >>> movaps 48(%rdi), %xmm2 >>>

On Fri, Jul 6, 2012 at 6:39 PM, Jakob Stoklund Olesen <stoklund at 2pi.dk> wrote: > > On Jul 5, 2012, at 9:06 PM, Anthony Blake <amb33 at cs.waikato.ac.nz> wrote: > >> I've noticed that LLVM tends to generate suboptimal code and spill an >> excessive amount of registers in large functions, such as in those >> that are automatically generated by FFTW. >

Hi, I've noticed that LLVM tends to generate suboptimal code and spill an excessive amount of registers in large functions, such as in those that are automatically generated by FFTW. LLVM generates good code for a function that computes an 8-point complex FFT, but from 16-point upwards, icc or gcc generates much better code. Here is an example of a sequence of instructions from a 32-point

I am using a 64 bit machine with CentOS5. I am getting the following errors when I try to install the rimage package g++ -shared -L/usr/local/lib64 -o rimage.so equalize.o fftw_access_func.o freqfilters.o interface.o jpegio.o laplacian.o matrix.o smooth.o sobel.o -ljpeg -lfftw /usr/bin/ld: /usr/local/lib/libfftw.a(fftwnd.o): relocation R_X86_64_32 against `a local symbol' can not be used when

Gang, I've got to admit, what really sold me on debian was apt-get. And I've been resisting getting up to speed with yum. So, can any of ya point me to a good starter page, maybe one with migrators like me in mind? Many thanks. -- Robert Thomas ("beau") Hayes Link Open your heart, pray for peace, preach healing (c)2004ISR http://www.semanticrestructuring.com/

Hello, There was no problem installing "APT" package in CentOS 4.0 Beta, but so far I could not install APT or Synaptic by "# yum install apt" or by "# yum install synaptic" in a usual manner. Is there any solution for this? It seems to me, something is wrong only for these two packages. Regards.

When an RGB photo is displayed using R's image() function with the help of the pixmap (or rimage) package it is common to see an anomalous white line running across the picture (either horizontally or vertically). The line can be removed by simply stretching the image frame a little in the direction perpendicular to the anomalous line, or by maximizing the image frame (tested under Fedora 10;

Alexander Chemeris wrote: > Hi, > > On 5/27/08, Thorvald Natvig <thorvald at natvig.com> wrote: > >> And here's a patch for Intel Math Kernel Library. This allows commercial >> users of Speex to use a high-speed FFT library that isn't GPL'd. (You do >> need to pay for it though). This is 3 times faster than the default FFT in >> speex, and

On 5/28/08, Jean-Marc Valin <jean-marc.valin at usherbrooke.ca> wrote: > > Yes, MKL is commercial software and you do need to pay for it, but > > unlike FFTW it's not GPL. FFTW is useless for any closed-source program > > that wishes to use Speex, so this is the non-GPL alternative. > > Considering that FFTW also sells licenses for non-GPL use, I tend to >

Hi folks: I am trying to install the package "rimage" in R 1.8.0 on an Alpha Linux box. "R CMD INSTALL rimage_0.5-1.tar.gz" fails with the following: ... ... checking for stdint.h... yes checking for unistd.h... yes checking fftw.h usability... yes checking fftw.h presence... yes checking for fftw.h... yes checking jpeglib.h usability... yes checking jpeglib.h presence...